You are here

Home

KJC3_007849-T1, KJC3_007849-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007849-T1
Unique NameKJC3_007849-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:274103..275724-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007849-T1 ID=KJC3_007849-T1|Name=KJC3_007849-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1622bp|location=Sequence derived from alignment at ch6:274103..275724- (Aspergillus niger KJC3)
ATCATCTCAGCTTTCTGGATTCTCCATCTAGAATCTGGCATAATGACAAC
ACAAACCAACACCATCACGCAGACGGGAACAGTTCCCTCTTCCTTCTTCG
AGACAGCCCCATATATTGCTCCCGATGCTATCTTTGCTCTCACAGCAGAG
TACAATGCCGACACATTCCCCCAGAAAGTGAACCTCGGGCAAGGGACCTA
CCGAGATGAGAATGGACAGCCATGGGTTCTGCCTTCGGTGCGGAAGAGTC
GCGAGCTGCTCGTTGAGCAGGGTCTGAATCATGAGTATCTTCCGATCTTG
GGTCTTCAGGCGTTTCGCCAGGAGGCGAGTAAGATGGCATTAGGCTCTGG
ACTATACGAGAGAATCCAATCTAGGGTAGGTTTCAATATTCTGGAATTTC
CCACATCCACCTGTCTTATCTTATCATCTAACACGAACCAAATAATACCA
GCTCGCAACCTGCCAAGGCCTCTCCGGCACTGGGTCTCTGCATCTAGCAG
GCCTACTTCTCCGAAGTTGCCGTGCACCGTTACCAAAGATATACATCCCC
AGTCCCACATGGTCAAACCATCACCAGGTCTTTTCCTCTCTCGGGTTTAC
CTGCGAATCTTTCGGATACTATGATGACGCTCAGAAGAACATAGATATCG
ACAGCTACTACTCTGCCCTTAAACGGGCGGAACCAGGCTCTGTCGTCATC
CTTCACGCGTGCGCGCATAACCCCACCGGCTGCGATCCTAGCAAAGAGCA
ATGGAAGGAAGTCGGTCGTATTGTCAAAGAGAAGGGACTATTCCCTCTCT
TTGATGCAGCATACCTTGGCTTCAATTCGGGGAATATCGATGATGACGCT
TTTGCCATTCGGTATTTTGTTGATGAATTGGACGTGGAAGCAGGTGTATG
TTTGTCTTTTGCGAAGAATATGGGACTGTATGGTGAGATTGCTATCCCTT
CGTGACGTTTCAGTTGTTTCACTCGTTAACGCTCCCACAGGAGAGCGCAC
GGGCTGTCTATTGTTCGTAGCTCGGACAGACAAAGCCGCGACAAACACAC
AGTCAGTGCTCGAGATGCTGCAACGGTCTGAAGTCTCGAATCCGCCCGCT
TATGGAGCCAAAATTGCTACTACAATTTTGGCGGACCAGGAGCTTAAGGC
GCTCTGGTATAAAGACCTCGAGACCATGAGTGGTCGGATCCGGGCGATGC
GGAGGGCCCTGTACGATTCGTTGAACAGCAATGGTGAGATGTGAGTTGGT
ATGCATTTGACTAGTCTCTGACAAATGTGCAGGCGCTCCTGGTAATTGGG
ACCATTTGGTCCGCCAGTCGGGTATGTTTGGGTTCTTGGGTCTCGCTCCG
GATGTGGTCCAGAATCTGAAGGGTAAGTGAGCTGAACAATCCTCAGAATA
TCCTCTGAATATCCTACTAACTCAAATCCATACAGTGCAATACCACATCT
ACATGGCGGCCAGCTCGCGGGTCTCTATAGCCGGGCTCAACGACGGGAAT
GTGGATTACGTCGGTCGCTCGATTGCCGAGTGTCTGAAGAGCAACTAGAT
GCAGTGTTGCTACGTAGGAACAAACATTCATCTCCCACAACAATCTACGT
ACTTCATTCCATCATATCAAGT
back to top

Coding sequence (CDS) from alignment at ch6:274103..275724-

>KJC3_007849-T1 ID=KJC3_007849-T1|Name=KJC3_007849-T1|organism=Aspergillus niger KJC3|type=CDS|length=6300bp|location=Sequence derived from alignment at ch6:274103..275724- (Aspergillus niger KJC3)
TGCAATACCACATCTACATGGCGGCCAGCTCGCGGGTCTCTATAGCCGGG
CTCAACGACGGGAATGTGGATTACGTCGGTCGCTCGATTGCCGAGTGTCT
GAAGAGCAACTAGGCGCTCCTGGTAATTGGGACCATTTGGTCCGCCAGTC
GGGTATGTTTGGGTTCTTGGGTCTCGCTCCGGATGTGGTCCAGAATCTGA
AGGGAGAGCGCACGGGCTGTCTATTGTTCGTAGCTCGGACAGACAAAGCC
GCGACAAACACACAGTCAGTGCTCGAGATGCTGCAACGGTCTGAAGTCTC
GAATCCGCCCGCTTATGGAGCCAAAATTGCTACTACAATTTTGGCGGACC
AGGAGCTTAAGGCGCTCTGGTATAAAGACCTCGAGACCATGAGTGGTCGG
ATCCGGGCGATGCGGAGGGCCCTGTACGATTCGTTGAACAGCAATGCTCG
CAACCTGCCAAGGCCTCTCCGGCACTGGGTCTCTGCATCTAGCAGGCCTA
CTTCTCCGAAGTTGCCGTGCACCGTTACCAAAGATATACATCCCCAGTCC
CACATGGTCAAACCATCACCAGGTCTTTTCCTCTCTCGGGTTTACCTGCG
AATCTTTCGGATACTATGATGACGCTCAGAAGAACATAGATATCGACAGC
TACTACTCTGCCCTTAAACGGGCGGAACCAGGCTCTGTCGTCATCCTTCA
CGCGTGCGCGCATAACCCCACCGGCTGCGATCCTAGCAAAGAGCAATGGA
AGGAAGTCGGTCGTATTGTCAAAGAGAAGGGACTATTCCCTCTCTTTGAT
GCAGCATACCTTGGCTTCAATTCGGGGAATATCGATGATGACGCTTTTGC
CATTCGGTATTTTGTTGATGAATTGGACGTGGAAGCAGGTGTATGTTTGT
CTTTTGCGAAGAATATGGGACTGTATGATGACAACACAAACCAACACCAT
CACGCAGACGGGAACAGTTCCCTCTTCCTTCTTCGAGACAGCCCCATATA
TTGCTCCCGATGCTATCTTTGCTCTCACAGCAGAGTACAATGCCGACACA
TTCCCCCAGAAAGTGAACCTCGGGCAAGGGACCTACCGAGATGAGAATGG
ACAGCCATGGGTTCTGCCTTCGGTGCGGAAGAGTCGCGAGCTGCTCGTTG
AGCAGGGTCTGAATCATGAGTATCTTCCGATCTTGGGTCTTCAGGCGTTT
CGCCAGGAGGCGAGTAAGATGGCATTAGGCTCTGGACTATACGAGAGAAT
CCAATCTAGGTGCAATACCACATCTACATGGCGGCCAGCTCGCGGGTCTC
TATAGCCGGGCTCAACGACGGGAATGTGGATTACGTCGGTCGCTCGATTG
CCGAGTGTCTGAAGAGCAACTAGGCGCTCCTGGTAATTGGGACCATTTGG
TCCGCCAGTCGGGTATGTTTGGGTTCTTGGGTCTCGCTCCGGATGTGGTC
CAGAATCTGAAGGGAGAGCGCACGGGCTGTCTATTGTTCGTAGCTCGGAC
AGACAAAGCCGCGACAAACACACAGTCAGTGCTCGAGATGCTGCAACGGT
CTGAAGTCTCGAATCCGCCCGCTTATGGAGCCAAAATTGCTACTACAATT
TTGGCGGACCAGGAGCTTAAGGCGCTCTGGTATAAAGACCTCGAGACCAT
GAGTGGTCGGATCCGGGCGATGCGGAGGGCCCTGTACGATTCGTTGAACA
GCAATGCTCGCAACCTGCCAAGGCCTCTCCGGCACTGGGTCTCTGCATCT
AGCAGGCCTACTTCTCCGAAGTTGCCGTGCACCGTTACCAAAGATATACA
TCCCCAGTCCCACATGGTCAAACCATCACCAGGTCTTTTCCTCTCTCGGG
TTTACCTGCGAATCTTTCGGATACTATGATGACGCTCAGAAGAACATAGA
TATCGACAGCTACTACTCTGCCCTTAAACGGGCGGAACCAGGCTCTGTCG
TCATCCTTCACGCGTGCGCGCATAACCCCACCGGCTGCGATCCTAGCAAA
GAGCAATGGAAGGAAGTCGGTCGTATTGTCAAAGAGAAGGGACTATTCCC
TCTCTTTGATGCAGCATACCTTGGCTTCAATTCGGGGAATATCGATGATG
ACGCTTTTGCCATTCGGTATTTTGTTGATGAATTGGACGTGGAAGCAGGT
GTATGTTTGTCTTTTGCGAAGAATATGGGACTGTATGATGACAACACAAA
CCAACACCATCACGCAGACGGGAACAGTTCCCTCTTCCTTCTTCGAGACA
GCCCCATATATTGCTCCCGATGCTATCTTTGCTCTCACAGCAGAGTACAA
TGCCGACACATTCCCCCAGAAAGTGAACCTCGGGCAAGGGACCTACCGAG
ATGAGAATGGACAGCCATGGGTTCTGCCTTCGGTGCGGAAGAGTCGCGAG
CTGCTCGTTGAGCAGGGTCTGAATCATGAGTATCTTCCGATCTTGGGTCT
TCAGGCGTTTCGCCAGGAGGCGAGTAAGATGGCATTAGGCTCTGGACTAT
ACGAGAGAATCCAATCTAGGTGCAATACCACATCTACATGGCGGCCAGCT
CGCGGGTCTCTATAGCCGGGCTCAACGACGGGAATGTGGATTACGTCGGT
CGCTCGATTGCCGAGTGTCTGAAGAGCAACTAGGCGCTCCTGGTAATTGG
GACCATTTGGTCCGCCAGTCGGGTATGTTTGGGTTCTTGGGTCTCGCTCC
GGATGTGGTCCAGAATCTGAAGGGAGAGCGCACGGGCTGTCTATTGTTCG
TAGCTCGGACAGACAAAGCCGCGACAAACACACAGTCAGTGCTCGAGATG
CTGCAACGGTCTGAAGTCTCGAATCCGCCCGCTTATGGAGCCAAAATTGC
TACTACAATTTTGGCGGACCAGGAGCTTAAGGCGCTCTGGTATAAAGACC
TCGAGACCATGAGTGGTCGGATCCGGGCGATGCGGAGGGCCCTGTACGAT
TCGTTGAACAGCAATGCTCGCAACCTGCCAAGGCCTCTCCGGCACTGGGT
CTCTGCATCTAGCAGGCCTACTTCTCCGAAGTTGCCGTGCACCGTTACCA
AAGATATACATCCCCAGTCCCACATGGTCAAACCATCACCAGGTCTTTTC
CTCTCTCGGGTTTACCTGCGAATCTTTCGGATACTATGATGACGCTCAGA
AGAACATAGATATCGACAGCTACTACTCTGCCCTTAAACGGGCGGAACCA
GGCTCTGTCGTCATCCTTCACGCGTGCGCGCATAACCCCACCGGCTGCGA
TCCTAGCAAAGAGCAATGGAAGGAAGTCGGTCGTATTGTCAAAGAGAAGG
GACTATTCCCTCTCTTTGATGCAGCATACCTTGGCTTCAATTCGGGGAAT
ATCGATGATGACGCTTTTGCCATTCGGTATTTTGTTGATGAATTGGACGT
GGAAGCAGGTGTATGTTTGTCTTTTGCGAAGAATATGGGACTGTATGATG
ACAACACAAACCAACACCATCACGCAGACGGGAACAGTTCCCTCTTCCTT
CTTCGAGACAGCCCCATATATTGCTCCCGATGCTATCTTTGCTCTCACAG
CAGAGTACAATGCCGACACATTCCCCCAGAAAGTGAACCTCGGGCAAGGG
ACCTACCGAGATGAGAATGGACAGCCATGGGTTCTGCCTTCGGTGCGGAA
GAGTCGCGAGCTGCTCGTTGAGCAGGGTCTGAATCATGAGTATCTTCCGA
TCTTGGGTCTTCAGGCGTTTCGCCAGGAGGCGAGTAAGATGGCATTAGGC
TCTGGACTATACGAGAGAATCCAATCTAGGTGCAATACCACATCTACATG
GCGGCCAGCTCGCGGGTCTCTATAGCCGGGCTCAACGACGGGAATGTGGA
TTACGTCGGTCGCTCGATTGCCGAGTGTCTGAAGAGCAACTAGGCGCTCC
TGGTAATTGGGACCATTTGGTCCGCCAGTCGGGTATGTTTGGGTTCTTGG
GTCTCGCTCCGGATGTGGTCCAGAATCTGAAGGGAGAGCGCACGGGCTGT
CTATTGTTCGTAGCTCGGACAGACAAAGCCGCGACAAACACACAGTCAGT
GCTCGAGATGCTGCAACGGTCTGAAGTCTCGAATCCGCCCGCTTATGGAG
CCAAAATTGCTACTACAATTTTGGCGGACCAGGAGCTTAAGGCGCTCTGG
TATAAAGACCTCGAGACCATGAGTGGTCGGATCCGGGCGATGCGGAGGGC
CCTGTACGATTCGTTGAACAGCAATGCTCGCAACCTGCCAAGGCCTCTCC
GGCACTGGGTCTCTGCATCTAGCAGGCCTACTTCTCCGAAGTTGCCGTGC
ACCGTTACCAAAGATATACATCCCCAGTCCCACATGGTCAAACCATCACC
AGGTCTTTTCCTCTCTCGGGTTTACCTGCGAATCTTTCGGATACTATGAT
GACGCTCAGAAGAACATAGATATCGACAGCTACTACTCTGCCCTTAAACG
GGCGGAACCAGGCTCTGTCGTCATCCTTCACGCGTGCGCGCATAACCCCA
CCGGCTGCGATCCTAGCAAAGAGCAATGGAAGGAAGTCGGTCGTATTGTC
AAAGAGAAGGGACTATTCCCTCTCTTTGATGCAGCATACCTTGGCTTCAA
TTCGGGGAATATCGATGATGACGCTTTTGCCATTCGGTATTTTGTTGATG
AATTGGACGTGGAAGCAGGTGTATGTTTGTCTTTTGCGAAGAATATGGGA
CTGTATGATGACAACACAAACCAACACCATCACGCAGACGGGAACAGTTC
CCTCTTCCTTCTTCGAGACAGCCCCATATATTGCTCCCGATGCTATCTTT
GCTCTCACAGCAGAGTACAATGCCGACACATTCCCCCAGAAAGTGAACCT
CGGGCAAGGGACCTACCGAGATGAGAATGGACAGCCATGGGTTCTGCCTT
CGGTGCGGAAGAGTCGCGAGCTGCTCGTTGAGCAGGGTCTGAATCATGAG
TATCTTCCGATCTTGGGTCTTCAGGCGTTTCGCCAGGAGGCGAGTAAGAT
GGCATTAGGCTCTGGACTATACGAGAGAATCCAATCTAGGTGCAATACCA
CATCTACATGGCGGCCAGCTCGCGGGTCTCTATAGCCGGGCTCAACGACG
GGAATGTGGATTACGTCGGTCGCTCGATTGCCGAGTGTCTGAAGAGCAAC
TAGGCGCTCCTGGTAATTGGGACCATTTGGTCCGCCAGTCGGGTATGTTT
GGGTTCTTGGGTCTCGCTCCGGATGTGGTCCAGAATCTGAAGGGAGAGCG
CACGGGCTGTCTATTGTTCGTAGCTCGGACAGACAAAGCCGCGACAAACA
CACAGTCAGTGCTCGAGATGCTGCAACGGTCTGAAGTCTCGAATCCGCCC
GCTTATGGAGCCAAAATTGCTACTACAATTTTGGCGGACCAGGAGCTTAA
GGCGCTCTGGTATAAAGACCTCGAGACCATGAGTGGTCGGATCCGGGCGA
TGCGGAGGGCCCTGTACGATTCGTTGAACAGCAATGCTCGCAACCTGCCA
AGGCCTCTCCGGCACTGGGTCTCTGCATCTAGCAGGCCTACTTCTCCGAA
GTTGCCGTGCACCGTTACCAAAGATATACATCCCCAGTCCCACATGGTCA
AACCATCACCAGGTCTTTTCCTCTCTCGGGTTTACCTGCGAATCTTTCGG
ATACTATGATGACGCTCAGAAGAACATAGATATCGACAGCTACTACTCTG
CCCTTAAACGGGCGGAACCAGGCTCTGTCGTCATCCTTCACGCGTGCGCG
CATAACCCCACCGGCTGCGATCCTAGCAAAGAGCAATGGAAGGAAGTCGG
TCGTATTGTCAAAGAGAAGGGACTATTCCCTCTCTTTGATGCAGCATACC
TTGGCTTCAATTCGGGGAATATCGATGATGACGCTTTTGCCATTCGGTAT
TTTGTTGATGAATTGGACGTGGAAGCAGGTGTATGTTTGTCTTTTGCGAA
GAATATGGGACTGTATGATGACAACACAAACCAACACCATCACGCAGACG
GGAACAGTTCCCTCTTCCTTCTTCGAGACAGCCCCATATATTGCTCCCGA
TGCTATCTTTGCTCTCACAGCAGAGTACAATGCCGACACATTCCCCCAGA
AAGTGAACCTCGGGCAAGGGACCTACCGAGATGAGAATGGACAGCCATGG
GTTCTGCCTTCGGTGCGGAAGAGTCGCGAGCTGCTCGTTGAGCAGGGTCT
GAATCATGAGTATCTTCCGATCTTGGGTCTTCAGGCGTTTCGCCAGGAGG
CGAGTAAGATGGCATTAGGCTCTGGACTATACGAGAGAATCCAATCTAGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
GO:0008483transaminase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006520cellular amino acid metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007849KJC3_007849Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007849-T1KJC3_007849-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007849-T1.cdsKJC3_007849-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007849-T1.utr3p1KJC3_007849-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007849-T1.exon5KJC3_007849-T1.exon5Aspergillus niger KJC3exon
KJC3_007849-T1.exon4KJC3_007849-T1.exon4Aspergillus niger KJC3exon
KJC3_007849-T1.exon3KJC3_007849-T1.exon3Aspergillus niger KJC3exon
KJC3_007849-T1.exon2KJC3_007849-T1.exon2Aspergillus niger KJC3exon
KJC3_007849-T1.exon1KJC3_007849-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007849-T1.utr5p1KJC3_007849-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR015421
DBxrefInterPro:IPR004839
DBxrefInterPro:IPR015422
DBxrefInterPro:IPR000796
DBxrefPFAM:PF00155
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:274103..275724 -
Powered by Drupal