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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:282193..283295+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007854-T2 ID=KJC3_007854-T2|Name=KJC3_007854-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1103bp|location=Sequence derived from alignment at ch6:282193..283295+ (Aspergillus niger KJC3)
CTCCAACAATCCACCCTGATGATGATCCCAGTGGCAGTGCCAGCTAACCC
CGTTATTTCCGACGACCTGCCACTCCATATATCCCAAATAAAACCCCGAC
TCTACAATAATAAACACTTCAGGCCATTCTACACCCTCAAACTCGTTACA
TGATTATAATGAAAATAATCCTAACCGGCAGCACTGGCTTCATCGGCCAC
CAAATCCTCACCCAATGTCTCCAAAACCCACACATCACATCCATCATCGC
GCTCTCCCGGCGCCCAATCCCCACCAAGAACCCCAAGCTCACCGTCAAAC
TCGTAGAAGATTTCCTCATCTACCCTGAGAGTCTGTTACAAGAGTTGAGG
GGAGCGGTGGCGTGTATTTGGTATAATTCCCCCACCCATCTACCTTACAG
ATAGGAGTAAAGTATACCTGTGACATTAATGAAAGAATACCGGAACAGGG
CGATCGGAATCAACAGGACCCGAGATACCGAAACAGCTCGGAAAATCAAT
GTTGAGTACACGATGGCTGCGATGAGGGCCTTCGGCACACATCTGCCTTC
CTTGGCAGAGGGAGATGGGAAGAAGTTCCGCTTCGTTTATCTGAGCGGAG
GCATGTCGGAGAGGGATCAGAGTAGGTCGTTGTGGATGGCGGGGGAGATG
AGGAAAATCAGGGTACTACTCTACTATTCATTCTCTCTTTTATACATTCT
AGGTTCTATTATATATGTTGGGGAAGGTCTAAGGTGGAAAAGCATGATAC
TAACGGATACGGACAGGGTCAAGTTGAGAACGAGTTGACCGACTACGAAA
ACAACAACAACAGTGTAGAGGTGTATATTGCCCGACCGGGGATGGTGCTT
GCACGGGGGATGAGTCTAAGGTCATTGATATTTGGAATGGGACCGTCGAT
TTGGGTGGACGGTTTGGCGAAGGTGTTGGTAGATGTTGCTGTGAGGGGGG
ATGTAGATGGAGGGAGGGTGTTGGAGAATGAGGAAATGCTTCGGTGGGAT
CATTGATTAATTACTGTGCTGATTGTGGGAACTAATAATTGAATATCCCG
AGTATGTTTCTGGTCCGTGGATTTAATTATTATTTGGCTAGTAAAAATTT
CCG back to topCoding sequence (CDS) from alignment at ch6:282193..283295+ >KJC3_007854-T2 ID=KJC3_007854-T2|Name=KJC3_007854-T2|organism=Aspergillus niger KJC3|type=CDS|length=1122bp|location=Sequence derived from alignment at ch6:282193..283295+ (Aspergillus niger KJC3)
ATGATTATAATGAAAATAATCCTAACCGGCAGCACTGGCTTCATCGGCCA
CCAAATCCTCACCCAATGTCTCCAAAACCCACACATCACATCCATCATCG
CGCTCTCCCGGCGCCCAATCCCCACCAAGAACCCCAAGCTCACCGTCAAA
CTCGTAGAAGATTTCCTCATCTACCCTGAGAGTCTGTTACAAGAGTTGAG
GGGAGCGGTGGCGTGTATTTGGGCGATCGGAATCAACAGGACCCGAGATA
CCGAAACAGCTCGGAAAATCAATGTTGAGTACACGATGGCTGCGATGAGG
GCCTTCGGCACACATCTGCCTTCCTTGGCAGAGGGAGATGGGAAGAAGTT
CCGCTTCGTTTATCTGAGCGGAGGCATGTCGGAGAGGGATCAGAGTAGGT
CGTTGTGGATGGCGGGGGAGATGAGGAAAATCAGGGTACTACTCTACTAT
TCATTCTCTCTTTTATACATTCTAGGTTCTATTATATATGTTGGGGAAGG
TCTAAGGTGGAAAAGCATGATACTAACGGATACGGACAGGGTCAAGTTGA
GAACGAGTTGAATGATTATAATGAAAATAATCCTAACCGGCAGCACTGGC
TTCATCGGCCACCAAATCCTCACCCAATGTCTCCAAAACCCACACATCAC
ATCCATCATCGCGCTCTCCCGGCGCCCAATCCCCACCAAGAACCCCAAGC
TCACCGTCAAACTCGTAGAAGATTTCCTCATCTACCCTGAGAGTCTGTTA
CAAGAGTTGAGGGGAGCGGTGGCGTGTATTTGGGCGATCGGAATCAACAG
GACCCGAGATACCGAAACAGCTCGGAAAATCAATGTTGAGTACACGATGG
CTGCGATGAGGGCCTTCGGCACACATCTGCCTTCCTTGGCAGAGGGAGAT
GGGAAGAAGTTCCGCTTCGTTTATCTGAGCGGAGGCATGTCGGAGAGGGA
TCAGAGTAGGTCGTTGTGGATGGCGGGGGAGATGAGGAAAATCAGGGTAC
TACTCTACTATTCATTCTCTCTTTTATACATTCTAGGTTCTATTATATAT
GTTGGGGAAGGTCTAAGGTGGAAAAGCATGATACTAACGGATACGGACAG
GGTCAAGTTGAGAACGAGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007854-T2.utr5p1 | KJC3_007854-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007854-T2.utr3p1 | KJC3_007854-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:282193..283295 + |
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