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KJC3_007861-T1, KJC3_007861-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007861-T1
Unique NameKJC3_007861-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:299048..300200+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007861-T1 ID=KJC3_007861-T1|Name=KJC3_007861-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1153bp|location=Sequence derived from alignment at ch6:299048..300200+ (Aspergillus niger KJC3)
CTGGTGGATTAGGACCAAAGGGACTATATCATTGCTTGTCCAGACGCTCA
GTGACGACCAATATCAGTGAGACGGGCATGAAGACGGTTTATGGTAAGAA
ATCTCTGCGATATCCTTTCGAGAAGTGGTGACCCGACATTATGGCTTATG
TGAAAGTGTATTCGCATGCGTAGTATTCCTACACTGCACATTGATCTCCC
TATTCATGTTTTACGCCAGTCACCGCATATCTTTGTTGCCAACACTGTCC
CGCTCGTCCTTGAAGCTGCGAACTTATCATCCAGGCCGATTTTCGACGAA
CCCAGCGGCAACTCCCATCATGGCCAACGCCGAGCAGCAAAATGAGCCGC
CCCTTTCGGCCAAGGACTTCAAGATCTACAATCGAGCAGCAGAGCAAATG
GAGTACTATGTAAGTTATTATGTCAATCTCAGACAAGCAACTCTTTCATT
CAGGATTAATCATTTCCCCATCCAGCATGGACTCCTCCGCCTATCATGGA
ACATGCTCTGGGAGGCCTCAACCAGCGGCCGACTACCCCCATATATGAAA
ATGCGGCAATTCATCACCGAGGGGCTGCGCTTTGCTCAGCATCTTGAGAT
TCATCATAGTATTGAAGAAAATCATGTCTTCCCTCATTTGGCGAAAAAGA
TGCCCGAGTTTCGCACGGGGCGTGGTCGCCAAGCTGCTGAACTCTTGCGG
CAGCATCGGCAAATTCATAAGGGGCTGGAAGAGTTTCAGAAGTATTTAGA
AGAATGTCAGGAGGGAAAGCAAGAGTTAGAATTTGATGTTTTACGGGGAA
AGATGGAGGGCTGGAGAGAGGTTCTTTGGACCCATTTGGACCAGGAGGTC
AAGACCTTGGGAGCCGAGAATATGAGACGGTACTGGACGAAGGAGGAAAT
GCCGCGGATACCCATGTAAGTCATCGTTGATAGTAAGTAGACAACATTGT
CGAGTCTAGTCAATGCTTCAAGATACAACGATATGATGAATAAAGAAACC
TTGGGCGACTCAGCTGTTGTCGCTGTGCACCTTAGGATTCTAATGGAAGG
CTGGATGCGCAACTTAACAGTAGGGATCTACAGGCTAAGCATTCCAGAGA
ATGAAGAGCCTTTCAGTCACAGCCAGTTTGGAATCCTCGCCTGAGATACT
GCC
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Coding sequence (CDS) from alignment at ch6:299048..300200+

>KJC3_007861-T1 ID=KJC3_007861-T1|Name=KJC3_007861-T1|organism=Aspergillus niger KJC3|type=CDS|length=2088bp|location=Sequence derived from alignment at ch6:299048..300200+ (Aspergillus niger KJC3)
ATGAAGACGGTTTATGTATTCCTACACTGCACATTGATCTCCCTATTCAT
GTTTTACGCCAGTCACCGCATATCTTTGTTGCCAACACTGTCCCGCTCGT
CCTTGAAGCTGCGAACTTATCATCCAGGCCGATTTTCGACGAACCCAGCG
GCAACTCCCATCATGGCCAACGCCGAGCAGCAAAATGAGCCGCCCCTTTC
GGCCAAGGACTTCAAGATCTACAATCGAGCAGCAGAGCAAATGGAGTACT
ATCATGGACTCCTCCGCCTATCATGGAACATGCTCTGGGAGGCCTCAACC
AGCGGCCGACTACCCCCATATATGAAAATGCGGCAATTCATCACCGAGGG
GCTGCGCTTTGCTCAGCATCTTGAGATTCATCATAGTATTGAAGAAAATC
ATGTCTTCCCTCATTTGGCGAAAAAGATGCCCGAGTTTCGCACGGGGCGT
GGTCGCCAAGCTGCTGAACTCTTGCGGCAGCATCGGCAAATTCATAAGGG
GCTGGAAGAGTTTCAGAAGTATTTAGAAGAATGTCAGGAGGGAAAGCAAG
AGTTAGAATTTGATGTTTTACGGGGAAAGATGGAGGGCTGGAGAGAGGTT
CTTTGGACCCATTTGGACCAGGAGGTCAAGACCTTGGGAGCCGAGAATAT
GAGACGGTACTGGACGAAGGAGGAAATGCCGCGGATACCCATGTAAATGA
AGACGGTTTATGTATTCCTACACTGCACATTGATCTCCCTATTCATGTTT
TACGCCAGTCACCGCATATCTTTGTTGCCAACACTGTCCCGCTCGTCCTT
GAAGCTGCGAACTTATCATCCAGGCCGATTTTCGACGAACCCAGCGGCAA
CTCCCATCATGGCCAACGCCGAGCAGCAAAATGAGCCGCCCCTTTCGGCC
AAGGACTTCAAGATCTACAATCGAGCAGCAGAGCAAATGGAGTACTATCA
TGGACTCCTCCGCCTATCATGGAACATGCTCTGGGAGGCCTCAACCAGCG
GCCGACTACCCCCATATATGAAAATGCGGCAATTCATCACCGAGGGGCTG
CGCTTTGCTCAGCATCTTGAGATTCATCATAGTATTGAAGAAAATCATGT
CTTCCCTCATTTGGCGAAAAAGATGCCCGAGTTTCGCACGGGGCGTGGTC
GCCAAGCTGCTGAACTCTTGCGGCAGCATCGGCAAATTCATAAGGGGCTG
GAAGAGTTTCAGAAGTATTTAGAAGAATGTCAGGAGGGAAAGCAAGAGTT
AGAATTTGATGTTTTACGGGGAAAGATGGAGGGCTGGAGAGAGGTTCTTT
GGACCCATTTGGACCAGGAGGTCAAGACCTTGGGAGCCGAGAATATGAGA
CGGTACTGGACGAAGGAGGAAATGCCGCGGATACCCATGTAAATGAAGAC
GGTTTATGTATTCCTACACTGCACATTGATCTCCCTATTCATGTTTTACG
CCAGTCACCGCATATCTTTGTTGCCAACACTGTCCCGCTCGTCCTTGAAG
CTGCGAACTTATCATCCAGGCCGATTTTCGACGAACCCAGCGGCAACTCC
CATCATGGCCAACGCCGAGCAGCAAAATGAGCCGCCCCTTTCGGCCAAGG
ACTTCAAGATCTACAATCGAGCAGCAGAGCAAATGGAGTACTATCATGGA
CTCCTCCGCCTATCATGGAACATGCTCTGGGAGGCCTCAACCAGCGGCCG
ACTACCCCCATATATGAAAATGCGGCAATTCATCACCGAGGGGCTGCGCT
TTGCTCAGCATCTTGAGATTCATCATAGTATTGAAGAAAATCATGTCTTC
CCTCATTTGGCGAAAAAGATGCCCGAGTTTCGCACGGGGCGTGGTCGCCA
AGCTGCTGAACTCTTGCGGCAGCATCGGCAAATTCATAAGGGGCTGGAAG
AGTTTCAGAAGTATTTAGAAGAATGTCAGGAGGGAAAGCAAGAGTTAGAA
TTTGATGTTTTACGGGGAAAGATGGAGGGCTGGAGAGAGGTTCTTTGGAC
CCATTTGGACCAGGAGGTCAAGACCTTGGGAGCCGAGAATATGAGACGGT
ACTGGACGAAGGAGGAAATGCCGCGGATACCCATGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007861KJC3_007861Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007861-T1KJC3_007861-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007861-T1.utr5p1KJC3_007861-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007861-T1.exon1KJC3_007861-T1.exon1Aspergillus niger KJC3exon
KJC3_007861-T1.exon2KJC3_007861-T1.exon2Aspergillus niger KJC3exon
KJC3_007861-T1.exon3KJC3_007861-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007861-T1.cdsKJC3_007861-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007861-T1.utr3p1KJC3_007861-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012312
DBxrefPFAM:PF01814
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:299048..300200 +
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