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KJC3_007861-T2, KJC3_007861-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007861-T2
Unique NameKJC3_007861-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:299048..300200+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007861-T2 ID=KJC3_007861-T2|Name=KJC3_007861-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1153bp|location=Sequence derived from alignment at ch6:299048..300200+ (Aspergillus niger KJC3)
CTGGTGGATTAGGACCAAAGGGACTATATCATTGCTTGTCCAGACGCTCA
GTGACGACCAATATCAGTGAGACGGGCATGAAGACGGTTTATGGTAAGAA
ATCTCTGCGATATCCTTTCGAGAAGTGGTGACCCGACATTATGGCTTATG
TGAAAGTGTATTCGCATGCGTAGTATTCCTACACTGCACATTGATCTCCC
TATTCATGTTTTACGCCAGTCACCGCATATCTTTGTTGCCAACACTGTCC
CGCTCGTCCTTGAAGCTGCGAACTTATCATCCAGGCCGATTTTCGACGAA
CCCAGCGGCAACTCCCATCATGGCCAACGCCGAGCAGCAAAATGAGCCGC
CCCTTTCGGCCAAGGACTTCAAGATCTACAATCGAGCAGCAGAGCAAATG
GAGTACTATGTAAGTTATTATGTCAATCTCAGACAAGCAACTCTTTCATT
CAGGATTAATCATTTCCCCATCCAGCATGGACTCCTCCGCCTATCATGGA
ACATGCTCTGGGAGGCCTCAACCAGCGGCCGACTACCCCCATATATGAAA
ATGCGGCAATTCATCACCGAGGGGCTGCGCTTTGCTCAGCATCTTGAGAT
TCATCATAGTATTGAAGAAAATCATGTCTTCCCTCATTTGGCGAAAAAGA
TGCCCGAGTTTCGCACGGGGCGTGGTCGCCAAGCTGCTGAACTCTTGCGG
CAGCATCGGCAAATTCATAAGGGGCTGGAAGAGTTTCAGAAGTATTTAGA
AGAATGTCAGGAGGGAAAGCAAGAGTTAGAATTTGATGTTTTACGGGGAA
AGATGGAGGGCTGGAGAGAGGTTCTTTGGACCCATTTGGACCAGGAGGTC
AAGACCTTGGGAGCCGAGAATATGAGACGGTACTGGACGAAGGAGGAAAT
GCCGCGGATACCCATGTAAGTCATCGTTGATAGTAAGTAGACAACATTGT
CGAGTCTAGTCAATGCTTCAAGATACAACGATATGATGAATAAAGAAACC
TTGGGCGACTCAGCTGTTGTCGCTGTGCACCTTAGGATTCTAATGGAAGG
CTGGATGCGCAACTTAACAGTAGGGATCTACAGGCTAAGCATTCCAGAGA
ATGAAGAGCCTTTCAGTCACAGCCAGTTTGGAATCCTCGCCTGAGATACT
GCC
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Coding sequence (CDS) from alignment at ch6:299048..300200+

>KJC3_007861-T2 ID=KJC3_007861-T2|Name=KJC3_007861-T2|organism=Aspergillus niger KJC3|type=CDS|length=1296bp|location=Sequence derived from alignment at ch6:299048..300200+ (Aspergillus niger KJC3)
ATGTTTTACGCCAGTCACCGCATATCTTTGTTGCCAACACTGTCCCGCTC
GTCCTTGAAGCTGCGAACTTATCATCCAGGCCGATTTTCGACGAACCCAG
CGGCAACTCCCATCATGGCCAACGCCGAGCAGCAAAATGAGCCGCCCCTT
TCGGCCAAGGACTTCAAGATCTACAATCGAGCAGCAGAGCAAATGGAGTA
CTATCATGGACTCCTCCGCCTATCATGGAACATGCTCTGGGAGGCCTCAA
CCAGCGGCCGACTACCCCCATATATGAAAATGCGGCAATTCATCACCGAG
GGGCTGCGCTTTGCTCAGCATCTTGAGATTCATCATAGTATTGAAGAAAA
TCATGTCTTCCCTCATTTGGCGAAAAAGATGCCCGAGTTTCGCACGGGGC
GTGGTCGCCAAGCTGCTGAACTCTTGCGGCAGCATCGGCAAATTCATAAG
GGGCTGGAAGAGTTTCAGAAGTATTTAGAAGAATGTCAGGAGGGAAAGCA
AGAGTTAGAATTTGATGTTTTACGGGGAAAGATGGAGGGCTGGAGAGAGG
TTCTTTGGACCCATTTGGACCAGGAGGTCAAGACCTTGGGAGCCGAGAAT
ATGAGACGGTACTGGACGAAGGAGGAAATGCCGCGGATACCCATGTAAAT
GTTTTACGCCAGTCACCGCATATCTTTGTTGCCAACACTGTCCCGCTCGT
CCTTGAAGCTGCGAACTTATCATCCAGGCCGATTTTCGACGAACCCAGCG
GCAACTCCCATCATGGCCAACGCCGAGCAGCAAAATGAGCCGCCCCTTTC
GGCCAAGGACTTCAAGATCTACAATCGAGCAGCAGAGCAAATGGAGTACT
ATCATGGACTCCTCCGCCTATCATGGAACATGCTCTGGGAGGCCTCAACC
AGCGGCCGACTACCCCCATATATGAAAATGCGGCAATTCATCACCGAGGG
GCTGCGCTTTGCTCAGCATCTTGAGATTCATCATAGTATTGAAGAAAATC
ATGTCTTCCCTCATTTGGCGAAAAAGATGCCCGAGTTTCGCACGGGGCGT
GGTCGCCAAGCTGCTGAACTCTTGCGGCAGCATCGGCAAATTCATAAGGG
GCTGGAAGAGTTTCAGAAGTATTTAGAAGAATGTCAGGAGGGAAAGCAAG
AGTTAGAATTTGATGTTTTACGGGGAAAGATGGAGGGCTGGAGAGAGGTT
CTTTGGACCCATTTGGACCAGGAGGTCAAGACCTTGGGAGCCGAGAATAT
GAGACGGTACTGGACGAAGGAGGAAATGCCGCGGATACCCATGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007861KJC3_007861Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007861-T2KJC3_007861-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007861-T2.utr5p1KJC3_007861-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_007861-T2.utr5p2KJC3_007861-T2.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007861-T2.exon1KJC3_007861-T2.exon1Aspergillus niger KJC3exon
KJC3_007861-T2.exon2KJC3_007861-T2.exon2Aspergillus niger KJC3exon
KJC3_007861-T2.exon3KJC3_007861-T2.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007861-T2.cdsKJC3_007861-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007861-T2.utr3p1KJC3_007861-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012312
DBxrefPFAM:PF01814
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:299048..300200 +
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