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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:303022..305869+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007863-T3 ID=KJC3_007863-T3|Name=KJC3_007863-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2848bp|location=Sequence derived from alignment at ch6:303022..305869+ (Aspergillus niger KJC3)
CTCCCGATTCTTCAGGGCCGTCGGCTCCGACCGACGTGACATCGGGGGTG
TCTTGGCTGCATCGGATGTCTCAAACGTGGGTGTTTTCATGGACTGTCAG
TGGCTGCCAGCATCCTTATCTTAATTAACCGTAATTTCCCATCCTCGCCC
TCGATACGGTTGTCTGGTTGAATATCTACACCACTACTGCTATACCCTGT
GACGTGACGGAGAAAGGCATTTTGATAAGGGAATGCATTCACTCATATGG
AAACGGTCGCGATTTCACAAAGTTATAAGAACCCAGCGTTCTTTTCACAA
TGCCAGTATTCGCTTTCGAACAACAGTTCGCTGAGCAGCTGCAGATCGCT
CGCCCACCATGCGCATGATCCCCTCGCTGTGTGCGGCAGCACTGCTCTTC
CGGAGCGCGCTGGCCGTGACCATCCCCGAGATCAATGGCGACCGATACGT
TTCTTCCTACCAAGGCAAACGAGTCTCCGGTCTCAAGGGCCTCGTCACAG
CCAAAGGTTCCAGCGGGTTCTATCTTCGCGCCACGGATGCCGATTCGGAC
TCCCGCACCTCCAACTCCATCTACGTGTATGGAAGCAGTGGAGTGTCTCA
AGTCACGGTCGGCGATATTGTCACTCTAAGTGGCAAGGCCACAGAATACC
GATCCTCGTCCAGCTACGTCTATAGTACTGAGATCGAGTCGCCATCCGAC
ATCCAGGTGCTCTCCAGCGATAATACCGTAACCCCCGTCGTCATTGGAAA
GGATAATCTGGATCCTCCTACCGAGCAGTACTCTTCCCTGGACAATGGCG
ATGTCTTCAGCCTGCCCGGCAACTCCAGTCGGCTCGCCACTGCGAATCCT
GTTTTGGAGCCGACCGAGTATGGCATGGACTTCTGGCAGAGCCTGAGTGG
TGAACTGGCGACCTTGACCGGACTCACAGCCATCAGCAAGGCCAATTCAT
ACGGGGATACCTGGGTGATTGGTGACTGGCCAGTGACGGGGAAGAATGAC
CGGGGCGGGCTGACCATGCGTGCAAATGGTTTGATTGCCTGACTCTGTTA
TCGCGCCAACTACTGACTTGGCATTCGACTGCAGACTCAAACCCGGAATC
CATCGTCATCGGCTCTCCGTTGGATGGGACTAAGAACCCAACTGATACTA
AGCTGGGTGATACCCTCGAGGATATAACTGGAATCATCACGCAGGCATAT
GGATTCTACACGCTGCTGCCTCTGACGGCCTTGACGAAGACCGGGTCCAA
CACCACGGAGGCGACAGCAACAACCCTCCAGGCAGATGGAACCTGTAGTT
CAATCACCATCGGAGATTACAATGTTGACAATTTCTCTCCACAGTCGAGC
ACCATGAGCGGGATTGGGGAGCACATCGCCAAGTATTTGAACAGTCCGAC
CGTCTTGTTCTTGCAGGAGATCCAGGACAACAGCGGAGCAACCGACGACG
GTGGTAATTTCAACCCTCTCCCCACAACATCATGATAAGATCATGTCACT
GACATCCTTGACACCAGTCGTTTCCGCCAACGAGACACTGTCCAAGCTCG
CTAGCGCAGTCAAAGAGCACGGCGGAGTCGCGTACAACTACACTGACATC
GATCCGGAGAATGACACGAACGGCGGAGAACGCGGCGGTAATATCCGGCC
AGCCTACCTCTACGACCCATCGGTGGTCCGATTGCGAAACTAAAATCCCG
GGTCCAGCACCGACTCCACCTCCGTCCTTTCCGACGGCAGTCTAAGCTAC
AACCCAGGTCTGATTGATCCCTCTAACGAGGCCTGGGATGACAGTCGCAA
GCCATTGGTAGCCCAATGGGAGACCCTGGACGGCAAGAACACATTCTACA
CGATCAACGTGCACTTCACCTTCAAATATGACAGCACTTCGCTGGAGGGC
GATCCGCGACCCCCCGTAAACGGATGGGTGGAGAACCGCGTGGACCAGGC
TAAAGTGGTTGCTGTGAGTGCTTTTTTTTTTCCGCGCTAACGTTCTCTCT
CATCTTGGTTGTGTCTGGAACCGAACAGCGTCTGACCGTGGTTGGTATAG
AAATTTGTTACCTCCATTCTGGATGTCAATTCCGACGCGAAGATTATTAC
TGCCGGTGACTTTAACGAGTATGCATTTGTCGAGCCTCTAGAAGTGTTTG
TCTCCGAGTCCAAGTTGCAGGACCTTGAGGAGGTCACTGGCATCCCTGCG
ACCGAGAGGTATACCTATCTGTATAACCAGAACTGCGAATCACTGGACCA
CATGTATGTGAGTTCTGCGTTGACGTCCGGGGCCAAGATGGAGCATATTC
ATGTCAACTCGTGGGTGTCGACGGATGATGAGTTGTCGGATCATGACCCT
ACAGTCGCGTTGTTCAATATGTGCGAGTAAGCACCAGCCCCTGGTTCTCT
TTCCCCATGCCCCGAAGCTTCTATTTAGAAGCAAGCGGTTGCATGCCCAT
GCTTAATAGAGAAGGGTCCGCAAACCCCGATCTAATCGAGCTGGGACTCA
CATGACAGCACGATAAAATCTTTCATCAGTGGAGCCACAAACCCATCGGA
CAAGCAATACTTGAATAATTGAGTTTTGCTTGTCTCCAAATATTTATTAA
TCTCGTATTTGCCGCGTAGCGATGTGTGCCTGGCATGGTCCGTTTCATTT
TCATTGCTTCATCTGTGCTGCTCCACTCACTGCCGCATCCGGAGTTCATG
ACTCGAGCGGGACTATTAATGCCTGAGGCAGAAAGTAAAGACAATGAATG
TATGTTGCCATGTTATGTGAAAGCTATCCAATCCATCAAGAAGCTTACGT
AGACTTCAGAAGAGGATTTGTGGTTTACTCGTACTGATTAATTTTGGC back to topCoding sequence (CDS) from alignment at ch6:303022..305869+ >KJC3_007863-T3 ID=KJC3_007863-T3|Name=KJC3_007863-T3|organism=Aspergillus niger KJC3|type=CDS|length=3330bp|location=Sequence derived from alignment at ch6:303022..305869+ (Aspergillus niger KJC3)
ATGGAAACGGTCGCGATTTCACAAAATCGCTCGCCCACCATGCGCATGAT
CCCCTCGCTGTGTGCGGCAGCACTGCTCTTCCGGAGCGCGCTGGCCGTGA
CCATCCCCGAGATCAATGGCGACCGATACGTTTCTTCCTACCAAGGCAAA
CGAGTCTCCGGTCTCAAGGGCCTCGTCACAGCCAAAGGTTCCAGCGGGTT
CTATCTTCGCGCCACGGATGCCGATTCGGACTCCCGCACCTCCAACTCCA
TCTACGTGTATGGAAGCAGTGGAGTGTCTCAAGTCACGGTCGGCGATATT
GTCACTCTAAGTGGCAAGGCCACAGAATACCGATCCTCGTCCAGCTACGT
CTATAGTACTGAGATCGAGTCGCCATCCGACATCCAGGTGCTCTCCAGCG
ATAATACCGTAACCCCCGTCGTCATTGGAAAGGATAATCTGGATCCTCCT
ACCGAGCAGTACTCTTCCCTGGACAATGGCGATGTCTTCAGCCTGCCCGG
CAACTCCAGTCGGCTCGCCACTGCGAATCCTGTTTTGGAGCCGACCGAGT
ATGGCATGGACTTCTGGCAGAGCCTGAGTGGTGAACTGGCGACCTTGACC
GGACTCACAGCCATCAGCAAGGCCAATTCATACGGGGATACCTGGGTGAT
TGGTGACTGGCCAGTGACGGGGAAGAATGACCGGGGCGGGCTGACCATGC
GTGCAAATGACTCAAACCCGGAATCCATCGTCATCGGCTCTCCGTTGGAT
GGGACTAAGAACCCAACTGATACTAAGCTGGGTGATACCCTCGAGGATAT
AACTGGAATCATCACGCAGGCATATGGATTCTACACGCTGCTGCCTCTGA
CGGCCTTGACGAAGACCGGGTCCAACACCACGGAGGCGACAGCAACAACC
CTCCAGGCAGATGGAACCTGTAGTTCAATCACCATCGGAGATTACAATGT
TGACAATTTCTCTCCACAGTCGAGCACCATGAGCGGGATTGGGGAGCACA
TCGCCAAGTATTTGAACAGTCCGACCGTCTTGTTCTTGCAGGAGATCCAG
GACAACAGCGGAGCAACCGACGACGGTGGTAATTTCAACCCTCTCCCCAC
AACATCATGAATGGAAACGGTCGCGATTTCACAAAATCGCTCGCCCACCA
TGCGCATGATCCCCTCGCTGTGTGCGGCAGCACTGCTCTTCCGGAGCGCG
CTGGCCGTGACCATCCCCGAGATCAATGGCGACCGATACGTTTCTTCCTA
CCAAGGCAAACGAGTCTCCGGTCTCAAGGGCCTCGTCACAGCCAAAGGTT
CCAGCGGGTTCTATCTTCGCGCCACGGATGCCGATTCGGACTCCCGCACC
TCCAACTCCATCTACGTGTATGGAAGCAGTGGAGTGTCTCAAGTCACGGT
CGGCGATATTGTCACTCTAAGTGGCAAGGCCACAGAATACCGATCCTCGT
CCAGCTACGTCTATAGTACTGAGATCGAGTCGCCATCCGACATCCAGGTG
CTCTCCAGCGATAATACCGTAACCCCCGTCGTCATTGGAAAGGATAATCT
GGATCCTCCTACCGAGCAGTACTCTTCCCTGGACAATGGCGATGTCTTCA
GCCTGCCCGGCAACTCCAGTCGGCTCGCCACTGCGAATCCTGTTTTGGAG
CCGACCGAGTATGGCATGGACTTCTGGCAGAGCCTGAGTGGTGAACTGGC
GACCTTGACCGGACTCACAGCCATCAGCAAGGCCAATTCATACGGGGATA
CCTGGGTGATTGGTGACTGGCCAGTGACGGGGAAGAATGACCGGGGCGGG
CTGACCATGCGTGCAAATGACTCAAACCCGGAATCCATCGTCATCGGCTC
TCCGTTGGATGGGACTAAGAACCCAACTGATACTAAGCTGGGTGATACCC
TCGAGGATATAACTGGAATCATCACGCAGGCATATGGATTCTACACGCTG
CTGCCTCTGACGGCCTTGACGAAGACCGGGTCCAACACCACGGAGGCGAC
AGCAACAACCCTCCAGGCAGATGGAACCTGTAGTTCAATCACCATCGGAG
ATTACAATGTTGACAATTTCTCTCCACAGTCGAGCACCATGAGCGGGATT
GGGGAGCACATCGCCAAGTATTTGAACAGTCCGACCGTCTTGTTCTTGCA
GGAGATCCAGGACAACAGCGGAGCAACCGACGACGGTGGTAATTTCAACC
CTCTCCCCACAACATCATGAATGGAAACGGTCGCGATTTCACAAAATCGC
TCGCCCACCATGCGCATGATCCCCTCGCTGTGTGCGGCAGCACTGCTCTT
CCGGAGCGCGCTGGCCGTGACCATCCCCGAGATCAATGGCGACCGATACG
TTTCTTCCTACCAAGGCAAACGAGTCTCCGGTCTCAAGGGCCTCGTCACA
GCCAAAGGTTCCAGCGGGTTCTATCTTCGCGCCACGGATGCCGATTCGGA
CTCCCGCACCTCCAACTCCATCTACGTGTATGGAAGCAGTGGAGTGTCTC
AAGTCACGGTCGGCGATATTGTCACTCTAAGTGGCAAGGCCACAGAATAC
CGATCCTCGTCCAGCTACGTCTATAGTACTGAGATCGAGTCGCCATCCGA
CATCCAGGTGCTCTCCAGCGATAATACCGTAACCCCCGTCGTCATTGGAA
AGGATAATCTGGATCCTCCTACCGAGCAGTACTCTTCCCTGGACAATGGC
GATGTCTTCAGCCTGCCCGGCAACTCCAGTCGGCTCGCCACTGCGAATCC
TGTTTTGGAGCCGACCGAGTATGGCATGGACTTCTGGCAGAGCCTGAGTG
GTGAACTGGCGACCTTGACCGGACTCACAGCCATCAGCAAGGCCAATTCA
TACGGGGATACCTGGGTGATTGGTGACTGGCCAGTGACGGGGAAGAATGA
CCGGGGCGGGCTGACCATGCGTGCAAATGACTCAAACCCGGAATCCATCG
TCATCGGCTCTCCGTTGGATGGGACTAAGAACCCAACTGATACTAAGCTG
GGTGATACCCTCGAGGATATAACTGGAATCATCACGCAGGCATATGGATT
CTACACGCTGCTGCCTCTGACGGCCTTGACGAAGACCGGGTCCAACACCA
CGGAGGCGACAGCAACAACCCTCCAGGCAGATGGAACCTGTAGTTCAATC
ACCATCGGAGATTACAATGTTGACAATTTCTCTCCACAGTCGAGCACCAT
GAGCGGGATTGGGGAGCACATCGCCAAGTATTTGAACAGTCCGACCGTCT
TGTTCTTGCAGGAGATCCAGGACAACAGCGGAGCAACCGACGACGGTGGT
AATTTCAACCCTCTCCCCACAACATCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007863-T3.utr5p1 | KJC3_007863-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:303022..305869 + |
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