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KJC3_007872-T1, KJC3_007872-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007872-T1
Unique NameKJC3_007872-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:327734..329158-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007872-T1 ID=KJC3_007872-T1|Name=KJC3_007872-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1425bp|location=Sequence derived from alignment at ch6:327734..329158- (Aspergillus niger KJC3)
CCCCACTCTTGTTTATACCATCCCCGAAAATGGAGGGAATCAGCAAGCTG
ATCGGAATTTTGTCCGAGATTGTGCTCGTATTATGGATTGCTAAAGCCTA
CTGAGGCTGGATATATTCGCCTGAGATACCAGAACAGCATCAGCAGCAAG
CAGCAAGAACACCAACCGACACAATGGCTCCCAGCGCTCCCCCTATTCTC
GATTTCTCCGCCTTCTACGGAGGCGACAGTGAGGCCAAAACCCAACTGGT
TGAGGCTGTCCGCAACTGCTGCCTGTACAATGGCTTCTTTCAGATCACCG
GCCATCGCGTGCCACTCGACTTACAGCGCCGTGTGATGCGCTGTGCCGAG
CGCTTCTTCGAACTCCCGCTGGAAGAGAAGCTCAAGATCGATAAAAGTAA
CCACTTCATTTTGACTCTCGTCCTAAGTCCCACTAACAAAGAGTTTGAAT
TTAGACAACAATAGTTTCAACCGCGGCTATGAGCTCCTCCGCTCGCAGAT
GCTCGAAGTCGGCACCGGCCCCGAGCTCAAAGAAGGCTTGTACATCGGCC
AGGAAATCCCTGAAGACCATCCTTACTACATCCAGAAGAAGCTCAACAGC
GGTCCGAACCAGTGGCCACCGACCGTGCCCGATAAGGAAGAATTCCAACG
CACCTCGATGGAATACTACAATGCGGTGTTTGAGTTGGCCAAGGACGTCC
TGTCTCTTCTGGCCCTGACTCTCAATGTATCTGGGGATTATTTCGACCCA
CTCACCGATGGCGCGGTCGCAACTATGCGCATGCTGCATTACCCTGCGCA
ACCTAAGGATGCAGATGAAAAGCTAAACCGTGGTATTGGCGCACATACTG
ATTTCGGGTGCATTACGCTGCTTCTGCAGGATGAGGTGGATGGATTGCAG
GTCCTCGATGCACCTACTGGTCAGTGGCTTGATGTGAGCGCTACTTCCCT
GTTTTTCTTTATTAGAGGGGCGCAGTCTAACGAGGCTACAATGCAGGTTC
AACCAGTCCCCGGCGCCTACGTAGTCAATCTCGGCAACCTGTTCATGCGC
ATGGCCAACGACCGGTACAAATCCAACATCCACCGCGTCATTAACAAGTC
CGGTCGCGAGCGGTACTCAATTCCGTTCTTCTTCAGTGGAAACCCGGATT
ACCTGTGCGAGTGTCTGCCCAACTGCCGCGCAGAGGGAGAGGCACCCAAG
TATCCACCCATCACTGTTGAGGACATGGTGACGGCTTCGTACAAGGAGAG
CTACGGACGAGCGGAGCAGTATAAGAAGGAGATGGAGGAAAAGGCGAAGT
TGAAGATGGAAACGGCCCCAGCTACAGCGGCGGTGGGTGCCTAAACAATG
CATGTACTAGCTGTTGTATATTTGTCCATAGCTTTCTTGCTTCAATCCCA
ATGAATTGTGATCACCATCTTAACC
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Coding sequence (CDS) from alignment at ch6:327734..329158-

>KJC3_007872-T1 ID=KJC3_007872-T1|Name=KJC3_007872-T1|organism=Aspergillus niger KJC3|type=CDS|length=3150bp|location=Sequence derived from alignment at ch6:327734..329158- (Aspergillus niger KJC3)
GTTCAACCAGTCCCCGGCGCCTACGTAGTCAATCTCGGCAACCTGTTCAT
GCGCATGGCCAACGACCGGTACAAATCCAACATCCACCGCGTCATTAACA
AGTCCGGTCGCGAGCGGTACTCAATTCCGTTCTTCTTCAGTGGAAACCCG
GATTACCTGTGCGAGTGTCTGCCCAACTGCCGCGCAGAGGGAGAGGCACC
CAAGTATCCACCCATCACTGTTGAGGACATGGTGACGGCTTCGTACAAGG
AGAGCTACGGACGAGCGGAGCAGTATAAGAAGGAGATGGAGGAAAAGGCG
AAGTTGAAGATGGAAACGGCCCCAGCTACAGCGGCGGTGGGTGCCTAAAC
AACAATAGTTTCAACCGCGGCTATGAGCTCCTCCGCTCGCAGATGCTCGA
AGTCGGCACCGGCCCCGAGCTCAAAGAAGGCTTGTACATCGGCCAGGAAA
TCCCTGAAGACCATCCTTACTACATCCAGAAGAAGCTCAACAGCGGTCCG
AACCAGTGGCCACCGACCGTGCCCGATAAGGAAGAATTCCAACGCACCTC
GATGGAATACTACAATGCGGTGTTTGAGTTGGCCAAGGACGTCCTGTCTC
TTCTGGCCCTGACTCTCAATGTATCTGGGGATTATTTCGACCCACTCACC
GATGGCGCGGTCGCAACTATGCGCATGCTGCATTACCCTGCGCAACCTAA
GGATGCAGATGAAAAGCTAAACCGTGGTATTGGCGCACATACTGATTTCG
GGTGCATTACGCTGCTTCTGCAGGATGAGGTGGATGGATTGCAGGTCCTC
GATGCACCTACTGGTCAGTGGCTTGATATGGCTCCCAGCGCTCCCCCTAT
TCTCGATTTCTCCGCCTTCTACGGAGGCGACAGTGAGGCCAAAACCCAAC
TGGTTGAGGCTGTCCGCAACTGCTGCCTGTACAATGGCTTCTTTCAGATC
ACCGGCCATCGCGTGCCACTCGACTTACAGCGCCGTGTGATGCGCTGTGC
CGAGCGCTTCTTCGAACTCCCGCTGGAAGAGAAGCTCAAGATCGATAAAA
GTTCAACCAGTCCCCGGCGCCTACGTAGTCAATCTCGGCAACCTGTTCAT
GCGCATGGCCAACGACCGGTACAAATCCAACATCCACCGCGTCATTAACA
AGTCCGGTCGCGAGCGGTACTCAATTCCGTTCTTCTTCAGTGGAAACCCG
GATTACCTGTGCGAGTGTCTGCCCAACTGCCGCGCAGAGGGAGAGGCACC
CAAGTATCCACCCATCACTGTTGAGGACATGGTGACGGCTTCGTACAAGG
AGAGCTACGGACGAGCGGAGCAGTATAAGAAGGAGATGGAGGAAAAGGCG
AAGTTGAAGATGGAAACGGCCCCAGCTACAGCGGCGGTGGGTGCCTAAAC
AACAATAGTTTCAACCGCGGCTATGAGCTCCTCCGCTCGCAGATGCTCGA
AGTCGGCACCGGCCCCGAGCTCAAAGAAGGCTTGTACATCGGCCAGGAAA
TCCCTGAAGACCATCCTTACTACATCCAGAAGAAGCTCAACAGCGGTCCG
AACCAGTGGCCACCGACCGTGCCCGATAAGGAAGAATTCCAACGCACCTC
GATGGAATACTACAATGCGGTGTTTGAGTTGGCCAAGGACGTCCTGTCTC
TTCTGGCCCTGACTCTCAATGTATCTGGGGATTATTTCGACCCACTCACC
GATGGCGCGGTCGCAACTATGCGCATGCTGCATTACCCTGCGCAACCTAA
GGATGCAGATGAAAAGCTAAACCGTGGTATTGGCGCACATACTGATTTCG
GGTGCATTACGCTGCTTCTGCAGGATGAGGTGGATGGATTGCAGGTCCTC
GATGCACCTACTGGTCAGTGGCTTGATATGGCTCCCAGCGCTCCCCCTAT
TCTCGATTTCTCCGCCTTCTACGGAGGCGACAGTGAGGCCAAAACCCAAC
TGGTTGAGGCTGTCCGCAACTGCTGCCTGTACAATGGCTTCTTTCAGATC
ACCGGCCATCGCGTGCCACTCGACTTACAGCGCCGTGTGATGCGCTGTGC
CGAGCGCTTCTTCGAACTCCCGCTGGAAGAGAAGCTCAAGATCGATAAAA
GTTCAACCAGTCCCCGGCGCCTACGTAGTCAATCTCGGCAACCTGTTCAT
GCGCATGGCCAACGACCGGTACAAATCCAACATCCACCGCGTCATTAACA
AGTCCGGTCGCGAGCGGTACTCAATTCCGTTCTTCTTCAGTGGAAACCCG
GATTACCTGTGCGAGTGTCTGCCCAACTGCCGCGCAGAGGGAGAGGCACC
CAAGTATCCACCCATCACTGTTGAGGACATGGTGACGGCTTCGTACAAGG
AGAGCTACGGACGAGCGGAGCAGTATAAGAAGGAGATGGAGGAAAAGGCG
AAGTTGAAGATGGAAACGGCCCCAGCTACAGCGGCGGTGGGTGCCTAAAC
AACAATAGTTTCAACCGCGGCTATGAGCTCCTCCGCTCGCAGATGCTCGA
AGTCGGCACCGGCCCCGAGCTCAAAGAAGGCTTGTACATCGGCCAGGAAA
TCCCTGAAGACCATCCTTACTACATCCAGAAGAAGCTCAACAGCGGTCCG
AACCAGTGGCCACCGACCGTGCCCGATAAGGAAGAATTCCAACGCACCTC
GATGGAATACTACAATGCGGTGTTTGAGTTGGCCAAGGACGTCCTGTCTC
TTCTGGCCCTGACTCTCAATGTATCTGGGGATTATTTCGACCCACTCACC
GATGGCGCGGTCGCAACTATGCGCATGCTGCATTACCCTGCGCAACCTAA
GGATGCAGATGAAAAGCTAAACCGTGGTATTGGCGCACATACTGATTTCG
GGTGCATTACGCTGCTTCTGCAGGATGAGGTGGATGGATTGCAGGTCCTC
GATGCACCTACTGGTCAGTGGCTTGATATGGCTCCCAGCGCTCCCCCTAT
TCTCGATTTCTCCGCCTTCTACGGAGGCGACAGTGAGGCCAAAACCCAAC
TGGTTGAGGCTGTCCGCAACTGCTGCCTGTACAATGGCTTCTTTCAGATC
ACCGGCCATCGCGTGCCACTCGACTTACAGCGCCGTGTGATGCGCTGTGC
CGAGCGCTTCTTCGAACTCCCGCTGGAAGAGAAGCTCAAGATCGATAAAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007872KJC3_007872Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007872-T1KJC3_007872-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007872-T1.cdsKJC3_007872-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007872-T1.utr3p1KJC3_007872-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007872-T1.exon3KJC3_007872-T1.exon3Aspergillus niger KJC3exon
KJC3_007872-T1.exon2KJC3_007872-T1.exon2Aspergillus niger KJC3exon
KJC3_007872-T1.exon1KJC3_007872-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007872-T1.utr5p1KJC3_007872-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR026992
DBxrefInterPro:IPR005123
DBxrefInterPro:IPR027443
DBxrefPFAM:PF14226
DBxrefPFAM:PF03171
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:327734..329158 -
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