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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:331411..334202+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007874-T2 ID=KJC3_007874-T2|Name=KJC3_007874-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2792bp|location=Sequence derived from alignment at ch6:331411..334202+ (Aspergillus niger KJC3)
TTCTCCTCTTTTTCCCTTCAGCTTATCACCGGCTTCGGCCTACCCGACCG
GCAGATAAATGAGGTCTTATCCCCATCAGAAGAATCCCTGCATGTATTCT
TCTCCTCCCGTATCGCTATATCATGACCCCCCATGAAGTCCCACGTGTGC
CACTGGCCCAACTGCGGCAAGACCTTCACTCGCGCAGAGCATCTGCGTCG
CCATGCCCTCAATCATGACCAGGCAAGGCAAGGCTATACCTGTGAGCGGT
GCTCCGTGCATTTCCACCGCCCGGATCTACTAAGTAGGTGCTGTGCTACT
GCAAGCTATCTCGACTCCTTGTCTGACCCGCCAGATCGCCATCTGATGCG
CCATGCCAAACGGGACGAGGAAGCTGGAGGCCCTGGTCAAGGAGTGCTGG
AGACGAGGAAACGTACTCGCCGTGCGGGAGATGGCTCCATCATTACTCGC
CCTCCCAAGCGTCAGTCGCGCGCTCGTGCCAGCCACAGCTTGCCTCCATC
GTCGTCGGCCTCTTCCTCGTCGATTTCCGTGACCAGCGCCCAGGACTATG
GTGCTCCTGTGTCCCCACCGACGTCAGCGAGCGACCCATCGTCCATGACG
TTGGACGAGCCCGATCCGCTACTGGCTCCGATGATGCCCAGCGGACCATT
CGAGCCCTATGTCGAGCCTATCCCAGGGCAGTTTGATGCGGCAGATGGCT
CCTGGAGTTTGGGACTGGACGGGATGGGCGATTTCTTCAGCCTTGACACT
GGTAATTCCCCCCATTCATACTTAATCACACTCCAGCTGACCAAACAGCT
ACCGATTTCAACATGCCTTTTGCGGCCACTCATAATTACAACTGGCTGTT
CGACGTCGCCTCTCTGGACGACGCCTTTCCGCCCTTCGACCTCCCACTAG
GTCCAGACATGGTCACCTTCGCCGAGGATGCCCTCCCCGTCGATGATCCA
AAATCATTCCTCGACCGCGACGGCTCCTCGGTCCTCCTGCAGGCAGCCTC
TTTCGTAGAACGCAGCGACCCGCTCGTCTTCTCCGCGCCCATCCTGGATC
CCCAACCAGACACCATCAACCTCGACTGGATGGACGCGCCCTCCCTCCTC
CAAACTACCCCCCAGCCCCATCTTCCCATCCTGACAGAAGATTCTCGTCA
AGGCATCCTCAACCTCATTGCGCAAGCTCCACCCCTGGCCATCGACGGCC
AACCCACCCCGCTGGACTCCCCTCTCCTCTCCCTTCCCTCCCTCCAATCC
TACAGCGACCTTTTCTTCACGCGCTTCAACACAACCTACCCCCTCCTCCA
CCAACCCACCTTCGACCCATCATCCACCACCCCGGTCCTTCTCGCCGCCA
TCCTCTCCATGGGCGCCACCTACAGCAGCCGCGAAGCGCACCAACTCGCG
GTCGGCATCCATGACTCCCTCCGCAACCAACTCTTCTGCCACGCGGACTT
CTCCCCCCAGCCTGACCTGTGGGTCCTTCAGGCAATGCTCCTAATCGACT
GTTTCGGCAAGATGCGCGCGGGGCCGAAACAGCGCGAACGCGCCCAGCTC
TTCCACTGCGTGTTGATCAAGCTCATCCGGCGGAGCGATTGCTGCGCTAT
TCGCCACGTCCCAAACCCCACTACCACTACCGACACAGACATCGACGCCC
TCTGGCGCACCGCCATGCACGATGAGCAGAAGAAGCGCGTCGCATTGCAC
TGCTTCATGTGGGATACGCAACACGCCGTCCTCTTCTCCCAGTCCCTGTG
CATGTCAGCCTTTGAAATCAGATCCGCTCTGCCCTGTTCCCAGGGGACAT
GGGAAGCATGCACGGCCAGTGACTGGGCGCATCATGCATCTATGGAGCCT
CCACCGCGGATGTTTCTCTCCGTGCTGAAAGGGTATATTACCCCCTCTGC
GATGGCTCGACCCCGCGATCTGAATACCCTGGCGCGGATCGTCATCCTGC
ACGGGCTCATGTCCGTCTCAGCGGACTTGAAAAGACGGGACCAGACGACG
TTACGAGCGGAGACGCCCGAGCGGGTCGGTGCGTGGACGCGACGCATGGG
GAGATCATATGATCTATGGAAGGTGGATTTTGATGCGGATTGCTTGGCGA
TGAAGTTGAATTTCGGACAGCATCCTGGGGAGGATGTGGCTGGGTCGAGA
CGAGGGGGAGAGGTGTTCACGGGGCTGAAGATGGCGGCGTGTGCGCTGTA
CCGGGCAGCCTGGCTGGCGCTGCAGGTAGAGATACTGGATTTGCAGGTCG
CTGCCGGGGCGGGGAGGATACTGGGAAGGACAGTGACGGAGGGAGATCGG
GAGAGGTCGCGACGGGGATTGAAGAAGTGGTTACTTGGTGGCGGGGAGGG
GGCGTTAGGAGCTGCGAGACAGGCGGCGAAGCTGTTGGAGGAGGCGGTGC
TGAGTCTGCATGATTGGGAGCAGACGGATGCTTTTCATTTCCCGTGGTGT
TTGTATTTGGCGACGTTGACTTGCTGGGCGTTTCATGGTGGGGTGGGTGG
TGAGGGCCAGGGAGGTGGTGAACGTCCTGGGGAGAGGGTTACGACGGATC
TGGCGAGTTTGATCGTGGCCATGACGACGTGTGGGAGTTTGGGGGATATG
GCGGCGCTCGGGGGAAAGTATGATACGAGGGGGTTGGTGAGGACGATGGC
GCAGCAGTTGGCCACGGTAAGGTGGGCGGTGGTGCATGATGCGATGAAGG
TGTTGGTGAATTTGGGGAATTAACTGTAGTTCTCTATTCTATTACTGATC
CGAAGTATGTATGTGGGCTACCTACTTGAGCTTAAACCCTTG back to topCoding sequence (CDS) from alignment at ch6:331411..334202+ >KJC3_007874-T2 ID=KJC3_007874-T2|Name=KJC3_007874-T2|organism=Aspergillus niger KJC3|type=CDS|length=4662bp|location=Sequence derived from alignment at ch6:331411..334202+ (Aspergillus niger KJC3)
ATGCGCCATGCCAAACGGGACGAGGAAGCTGGAGGCCCTGGTCAAGGAGT
GCTGGAGACGAGGAAACGTACTCGCCGTGCGGGAGATGGCTCCATCATTA
CTCGCCCTCCCAAGCGTCAGTCGCGCGCTCGTGCCAGCCACAGCTTGCCT
CCATCGTCGTCGGCCTCTTCCTCGTCGATTTCCGTGACCAGCGCCCAGGA
CTATGGTGCTCCTGTGTCCCCACCGACGTCAGCGAGCGACCCATCGTCCA
TGACGTTGGACGAGCCCGATCCGCTACTGGCTCCGATGATGCCCAGCGGA
CCATTCGAGCCCTATGTCGAGCCTATCCCAGGGCAGTTTGATGCGGCAGA
TGGCTCCTGGAGTTTGGGACTGGACGGGATGGGCGATTTCTTCAGCCTTG
ACACTGCTACCGATTTCAACATGCCTTTTGCGGCCACTCATAATTACAAC
TGGCTGTTCGACGTCGCCTCTCTGGACGACGCCTTTCCGCCCTTCGACCT
CCCACTAGGTCCAGACATGGTCACCTTCGCCGAGGATGCCCTCCCCGTCG
ATGATCCAAAATCATTCCTCGACCGCGACGGCTCCTCGGTCCTCCTGCAG
GCAGCCTCTTTCGTAGAACGCAGCGACCCGCTCGTCTTCTCCGCGCCCAT
CCTGGATCCCCAACCAGACACCATCAACCTCGACTGGATGGACGCGCCCT
CCCTCCTCCAAACTACCCCCCAGCCCCATCTTCCCATCCTGACAGAAGAT
TCTCGTCAAGGCATCCTCAACCTCATTGCGCAAGCTCCACCCCTGGCCAT
CGACGGCCAACCCACCCCGCTGGACTCCCCTCTCCTCTCCCTTCCCTCCC
TCCAATCCTACAGCGACCTTTTCTTCACGCGCTTCAACACAACCTACCCC
CTCCTCCACCAACCCACCTTCGACCCATCATCCACCACCCCGGTCCTTCT
CGCCGCCATCCTCTCCATGGGCGCCACCTACAGCAGCCGCGAAGCGCACC
AACTCGCGGTCGGCATCCATGACTCCCTCCGCAACCAACTCTTCTGCCAC
GCGGACTTCTCCCCCCAGCCTGACCTGTGGGTCCTTCAGGCAATGCTCCT
AATCGACTGTTTCGGCAAGATGCGCGCGGGGCCGAAACAGCGCGAACGCG
CCCAGCTCTTCCACTGCGTGTTGATCAAGCTCATCCGGCGGAGCGATTGC
TGCGCTATTCGCCACGTCCCAAACCCCACTACCACTACCGACACAGACAT
CGACGCCCTCTGGCGCACCGCCATGCACGATGAGCAGAAGAAGCGCGTCG
CATTGCACTGCTTCATGTGGGATACGCAACACGCCGTCCTCTTCTCCCAG
TCCCTGTGCATGTCAGCCTTTGAAATCAGATCCGCTCTGCCCTGTTCCCA
GGGGACATGGGAAGCATGCACGGCCAGTGACTGGGCGCATCATGCATCTA
TGGAGCCTCCACCGCGGATGTTTCTCTCCGTGCTGAAAGGGTATATTACC
CCCTCTGCGATGGCTCGACCCCGCGATCTGAATACCCTGGCGCGGATCGT
CATCCTGCACGGGCTCATGTCCGTCTCAGCGGACTTGAAAAGACGGGACC
AGACGACGTTACGAGCGGAGACGCCCGAGCGGGTCGGTGCGTGGACGCGA
CGCATGGGGAGATCATATGATCTATGGAAGGTGGATTTTGATGCGGATTG
CTTGGCGATGAAGTTGAATTTCGGACAGCATCCTGGGGAGGATGTGGCTG
GGTCGAGACGAGGGGGAGAGGTGTTCACGGGGCTGAAGATGGCGGCGTGT
GCGCTGTACCGGGCAGCCTGGCTGGCGCTGCAGGTAGAGATACTGGATTT
GCAGGTCGCTGCCGGGGCGGGGAGGATACTGGGAAGGACAGTGACGGAGG
GAGATCGGGAGAGGTCGCGACGGGGATTGAAGAAGTGGTTACTTGGTGGC
GGGGAGGGGGCGTTAGGAGCTGCGAGACAGGCGGCGAAGCTGTTGGAGGA
GGCGGTGCTGAGTCTGCATGATTGGGAGCAGACGGATGCTTTTCATTTCC
CGTGGTGTTTGTATTTGGCGACGTTGACTTGCTGGGCGTTTCATGGTGGG
GTGGGTGGTGAGGGCCAGGGAGGTGGTGAACGTCCTGGGGAGAGGGTTAC
GACGGATCTGGCGAGTTTGATCGTGGCCATGACGACGTGTGGGAGTTTGG
GGGATATGGCGGCGCTCGGGGGAAAGTATGATACGAGGGGGTTGGTGAGG
ACGATGGCGCAGCAGTTGGCCACGGTAAGGTGGGCGGTGGTGCATGATGC
GATGAAGGTGTTGGTGAATTTGGGGAATTAAATGCGCCATGCCAAACGGG
ACGAGGAAGCTGGAGGCCCTGGTCAAGGAGTGCTGGAGACGAGGAAACGT
ACTCGCCGTGCGGGAGATGGCTCCATCATTACTCGCCCTCCCAAGCGTCA
GTCGCGCGCTCGTGCCAGCCACAGCTTGCCTCCATCGTCGTCGGCCTCTT
CCTCGTCGATTTCCGTGACCAGCGCCCAGGACTATGGTGCTCCTGTGTCC
CCACCGACGTCAGCGAGCGACCCATCGTCCATGACGTTGGACGAGCCCGA
TCCGCTACTGGCTCCGATGATGCCCAGCGGACCATTCGAGCCCTATGTCG
AGCCTATCCCAGGGCAGTTTGATGCGGCAGATGGCTCCTGGAGTTTGGGA
CTGGACGGGATGGGCGATTTCTTCAGCCTTGACACTGCTACCGATTTCAA
CATGCCTTTTGCGGCCACTCATAATTACAACTGGCTGTTCGACGTCGCCT
CTCTGGACGACGCCTTTCCGCCCTTCGACCTCCCACTAGGTCCAGACATG
GTCACCTTCGCCGAGGATGCCCTCCCCGTCGATGATCCAAAATCATTCCT
CGACCGCGACGGCTCCTCGGTCCTCCTGCAGGCAGCCTCTTTCGTAGAAC
GCAGCGACCCGCTCGTCTTCTCCGCGCCCATCCTGGATCCCCAACCAGAC
ACCATCAACCTCGACTGGATGGACGCGCCCTCCCTCCTCCAAACTACCCC
CCAGCCCCATCTTCCCATCCTGACAGAAGATTCTCGTCAAGGCATCCTCA
ACCTCATTGCGCAAGCTCCACCCCTGGCCATCGACGGCCAACCCACCCCG
CTGGACTCCCCTCTCCTCTCCCTTCCCTCCCTCCAATCCTACAGCGACCT
TTTCTTCACGCGCTTCAACACAACCTACCCCCTCCTCCACCAACCCACCT
TCGACCCATCATCCACCACCCCGGTCCTTCTCGCCGCCATCCTCTCCATG
GGCGCCACCTACAGCAGCCGCGAAGCGCACCAACTCGCGGTCGGCATCCA
TGACTCCCTCCGCAACCAACTCTTCTGCCACGCGGACTTCTCCCCCCAGC
CTGACCTGTGGGTCCTTCAGGCAATGCTCCTAATCGACTGTTTCGGCAAG
ATGCGCGCGGGGCCGAAACAGCGCGAACGCGCCCAGCTCTTCCACTGCGT
GTTGATCAAGCTCATCCGGCGGAGCGATTGCTGCGCTATTCGCCACGTCC
CAAACCCCACTACCACTACCGACACAGACATCGACGCCCTCTGGCGCACC
GCCATGCACGATGAGCAGAAGAAGCGCGTCGCATTGCACTGCTTCATGTG
GGATACGCAACACGCCGTCCTCTTCTCCCAGTCCCTGTGCATGTCAGCCT
TTGAAATCAGATCCGCTCTGCCCTGTTCCCAGGGGACATGGGAAGCATGC
ACGGCCAGTGACTGGGCGCATCATGCATCTATGGAGCCTCCACCGCGGAT
GTTTCTCTCCGTGCTGAAAGGGTATATTACCCCCTCTGCGATGGCTCGAC
CCCGCGATCTGAATACCCTGGCGCGGATCGTCATCCTGCACGGGCTCATG
TCCGTCTCAGCGGACTTGAAAAGACGGGACCAGACGACGTTACGAGCGGA
GACGCCCGAGCGGGTCGGTGCGTGGACGCGACGCATGGGGAGATCATATG
ATCTATGGAAGGTGGATTTTGATGCGGATTGCTTGGCGATGAAGTTGAAT
TTCGGACAGCATCCTGGGGAGGATGTGGCTGGGTCGAGACGAGGGGGAGA
GGTGTTCACGGGGCTGAAGATGGCGGCGTGTGCGCTGTACCGGGCAGCCT
GGCTGGCGCTGCAGGTAGAGATACTGGATTTGCAGGTCGCTGCCGGGGCG
GGGAGGATACTGGGAAGGACAGTGACGGAGGGAGATCGGGAGAGGTCGCG
ACGGGGATTGAAGAAGTGGTTACTTGGTGGCGGGGAGGGGGCGTTAGGAG
CTGCGAGACAGGCGGCGAAGCTGTTGGAGGAGGCGGTGCTGAGTCTGCAT
GATTGGGAGCAGACGGATGCTTTTCATTTCCCGTGGTGTTTGTATTTGGC
GACGTTGACTTGCTGGGCGTTTCATGGTGGGGTGGGTGGTGAGGGCCAGG
GAGGTGGTGAACGTCCTGGGGAGAGGGTTACGACGGATCTGGCGAGTTTG
ATCGTGGCCATGACGACGTGTGGGAGTTTGGGGGATATGGCGGCGCTCGG
GGGAAAGTATGATACGAGGGGGTTGGTGAGGACGATGGCGCAGCAGTTGG
CCACGGTAAGGTGGGCGGTGGTGCATGATGCGATGAAGGTGTTGGTGAAT
TTGGGGAATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:331411..334202 + |
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