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KJC3_007884-T1, KJC3_007884-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007884-T1
Unique NameKJC3_007884-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:355416..357513-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007884-T1 ID=KJC3_007884-T1|Name=KJC3_007884-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2098bp|location=Sequence derived from alignment at ch6:355416..357513- (Aspergillus niger KJC3)
GGCTGTGGTGGCAATGTTATAATTCTCCTTATCCCCCGGCCGCGGTCGAC
GAGGCTTGCTGATTTTTGTCTCTTTCATCGTCTTGAATTTTGACCTGTTC
TTTTTCTTCCTCTTGTATCGACCATCCCTTAATGATGGCCGATCACTCTA
CCATGGCGGCCTACGAAACGTCGAGTAATCGGAGCCCGCAGGATGCTGAG
AAGAAAGGCGAGCCCATGGAGCGCTGGGCATCTGTGGATGTTGACTACGG
TGCTGAAACCGATCTCAAGCGGAGCTTGTCCACGCGGCATCTGACTATGA
TTGCGCTGGGGTCATCGATTGGTATGGGATTATGGCTGGGAAGTGGTGAA
TCGCTGGAGAATGGTGGTCCCGCAGCCATCTTCATTGGCTACCTGCTGAG
TGGCACGATGATATGGTCCGTCAGCCACTCCATCGGTGAGATGGCCGTTA
TGTATCCTCTGCCATCCGCATTCACTCAGTGGACGGAGATCTTCATCGAC
AGATCGGCGGCCTTCGCGCTGGGCTGGGCGTATTGGTTCTCCTACTTTAT
CACGATCGCAAACGAACTTCAGGTAGGACCTATGTATCTGGGTAGCTGAG
AGTTCTGTGCTGACTGCTTAGGGTATCGTCACGGTCCTCAATTTTTGGAC
AGATAAGGTGCCCATTGCGGCCTGGATCACAATCTTCTGGGTAGTGATCA
TCTTCATTAATGTTTTTGCGGTCCGGTTCTTTGGCGAGGTGGAGGTCATT
GCCTCCTCTATCAAGTTTGGATGGATCTTCGTGGTCATTATCTCTCTGAT
CGGTTAGTCGCGTGCGCATGATCTCCTTTTCATCGAATCCTCCAACTGAC
GCAAACCCATCTCGTGTTTGATAGTGATTTCCGCCGGCGGCGCGCCCGAC
GAAGGACCGATCGGCTTCCGTTACTGGAACTCGATGCCATTTACCAACGG
CTTCAAAGGCTTCCTGTCCGTCATGCCCACCTGCATCTTCGCCATGTCCG
GTTCGGAGAACTCGGCGCTGGTCGCAGCAGAGACAGATAACCCGCGCAAG
GCGGTGCCACGCGCCGTGAGCTCGATCTGGTTGCGTCTATCGCTGTTCTA
CGTCTTGGGATCGCTGATGATCACCATCACGGTGTCACCGAAGGATCCTA
ACCTTTTCGGTGGCAGCGGCGTCAACGCATCGCCATTTGTCATTGCCTAT
CGCAACGCGGGTCTTGCTCCATTGGCACACATCATGAATGCGGTGATCTT
CATCTCTGTGTTGTCCACGGGAAGTATTTCTGCCTATGGTGGTTCGCGGA
CACTGATGGGGTTGACACACTTGAATCTTGCGCCGAAGGTTGGTCTTCGC
TCCCTCTCAATAGTATCCAGTTCATCAATTACCTGTCTAAGTCTTGTCAC
TAACTCCTCTGCCTACAAACCTAGATCTTCGGCAAGGCCGACAAATCCGG
TCGCCCCGTCGCCGGACTGGTCATCACGCTTGTCATTGGCGGCGGCTTGG
CCTACCTCAACGTCAACAACAAGGGTTCGACGGTCTTCACCTGGTTCTCG
AACCTGACCTCCCTCTTCACGCTCTTCGGATGGGGCACCATCTGCCTCTC
TCACCTCCGTATGCGCTACGCCTGGAAGATCCAAGGGCGCTCCGTCGAAG
ACCTCCCCTGGCGGTCCTGGACCTACCCCTACGGGGCCATCTGGGGCTTG
ACCTGGTGCATTCTGCTGATCATCGCCGAGTTCTATCTCAGTTTGTGGCC
ACTGGGCGGCAATCCCACGGCCAAGGGCTTCTTCGCGAACTATGTCTCGG
TGGTAGCGATCGTGGTGCTGTATATCGGGGCGCGCTGCTACTACCGCGGA
CGGTGGTGGGTGGATGCGAGCACGATTGACCTCGATGGCCCTCGGCGGTT
CTATGCCGATGTGGCGGATGTCGAGGCGAGGCCGGCCAAGACGGGGGTGA
AGAAGTATGCGTCGATGGTGGTGTCGGCTATTCTTGAGTAGACACTCAGT
TGTGATGTAGGTAGTAACTTGTAGGGTATATGGTAGGTTTAGGTTAGGCG
TATATATTGGTTGGCTTTGTCAATGTATATTGTTCATGGGAAGTTATG
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Coding sequence (CDS) from alignment at ch6:355416..357513-

>KJC3_007884-T1 ID=KJC3_007884-T1|Name=KJC3_007884-T1|organism=Aspergillus niger KJC3|type=CDS|length=6612bp|location=Sequence derived from alignment at ch6:355416..357513- (Aspergillus niger KJC3)
ATCTTCGGCAAGGCCGACAAATCCGGTCGCCCCGTCGCCGGACTGGTCAT
CACGCTTGTCATTGGCGGCGGCTTGGCCTACCTCAACGTCAACAACAAGG
GTTCGACGGTCTTCACCTGGTTCTCGAACCTGACCTCCCTCTTCACGCTC
TTCGGATGGGGCACCATCTGCCTCTCTCACCTCCGTATGCGCTACGCCTG
GAAGATCCAAGGGCGCTCCGTCGAAGACCTCCCCTGGCGGTCCTGGACCT
ACCCCTACGGGGCCATCTGGGGCTTGACCTGGTGCATTCTGCTGATCATC
GCCGAGTTCTATCTCAGTTTGTGGCCACTGGGCGGCAATCCCACGGCCAA
GGGCTTCTTCGCGAACTATGTCTCGGTGGTAGCGATCGTGGTGCTGTATA
TCGGGGCGCGCTGCTACTACCGCGGACGGTGGTGGGTGGATGCGAGCACG
ATTGACCTCGATGGCCCTCGGCGGTTCTATGCCGATGTGGCGGATGTCGA
GGCGAGGCCGGCCAAGACGGGGGTGAAGAAGTATGCGTCGATGGTGGTGT
CGGCTATTCTTGAGTAGTGATTTCCGCCGGCGGCGCGCCCGACGAAGGAC
CGATCGGCTTCCGTTACTGGAACTCGATGCCATTTACCAACGGCTTCAAA
GGCTTCCTGTCCGTCATGCCCACCTGCATCTTCGCCATGTCCGGTTCGGA
GAACTCGGCGCTGGTCGCAGCAGAGACAGATAACCCGCGCAAGGCGGTGC
CACGCGCCGTGAGCTCGATCTGGTTGCGTCTATCGCTGTTCTACGTCTTG
GGATCGCTGATGATCACCATCACGGTGTCACCGAAGGATCCTAACCTTTT
CGGTGGCAGCGGCGTCAACGCATCGCCATTTGTCATTGCCTATCGCAACG
CGGGTCTTGCTCCATTGGCACACATCATGAATGCGGTGATCTTCATCTCT
GTGTTGTCCACGGGAAGTATTTCTGCCTATGGTGGTTCGCGGACACTGAT
GGGGTTGACACACTTGAATCTTGCGCCGAAGGGTATCGTCACGGTCCTCA
ATTTTTGGACAGATAAGGTGCCCATTGCGGCCTGGATCACAATCTTCTGG
GTAGTGATCATCTTCATTAATGTTTTTGCGGTCCGGTTCTTTGGCGAGGT
GGAGGTCATTGCCTCCTCTATCAAGTTTGGATGGATCTTCGTGGTCATTA
TCTCTCTGATCGATGATGGCCGATCACTCTACCATGGCGGCCTACGAAAC
GTCGAGTAATCGGAGCCCGCAGGATGCTGAGAAGAAAGGCGAGCCCATGG
AGCGCTGGGCATCTGTGGATGTTGACTACGGTGCTGAAACCGATCTCAAG
CGGAGCTTGTCCACGCGGCATCTGACTATGATTGCGCTGGGGTCATCGAT
TGGTATGGGATTATGGCTGGGAAGTGGTGAATCGCTGGAGAATGGTGGTC
CCGCAGCCATCTTCATTGGCTACCTGCTGAGTGGCACGATGATATGGTCC
GTCAGCCACTCCATCGGTGAGATGGCCGTTATGTATCCTCTGCCATCCGC
ATTCACTCAGTGGACGGAGATCTTCATCGACAGATCGGCGGCCTTCGCGC
TGGGCTGGGCGTATTGGTTCTCCTACTTTATCACGATCGCAAACGAACTT
CAGATCTTCGGCAAGGCCGACAAATCCGGTCGCCCCGTCGCCGGACTGGT
CATCACGCTTGTCATTGGCGGCGGCTTGGCCTACCTCAACGTCAACAACA
AGGGTTCGACGGTCTTCACCTGGTTCTCGAACCTGACCTCCCTCTTCACG
CTCTTCGGATGGGGCACCATCTGCCTCTCTCACCTCCGTATGCGCTACGC
CTGGAAGATCCAAGGGCGCTCCGTCGAAGACCTCCCCTGGCGGTCCTGGA
CCTACCCCTACGGGGCCATCTGGGGCTTGACCTGGTGCATTCTGCTGATC
ATCGCCGAGTTCTATCTCAGTTTGTGGCCACTGGGCGGCAATCCCACGGC
CAAGGGCTTCTTCGCGAACTATGTCTCGGTGGTAGCGATCGTGGTGCTGT
ATATCGGGGCGCGCTGCTACTACCGCGGACGGTGGTGGGTGGATGCGAGC
ACGATTGACCTCGATGGCCCTCGGCGGTTCTATGCCGATGTGGCGGATGT
CGAGGCGAGGCCGGCCAAGACGGGGGTGAAGAAGTATGCGTCGATGGTGG
TGTCGGCTATTCTTGAGTAGTGATTTCCGCCGGCGGCGCGCCCGACGAAG
GACCGATCGGCTTCCGTTACTGGAACTCGATGCCATTTACCAACGGCTTC
AAAGGCTTCCTGTCCGTCATGCCCACCTGCATCTTCGCCATGTCCGGTTC
GGAGAACTCGGCGCTGGTCGCAGCAGAGACAGATAACCCGCGCAAGGCGG
TGCCACGCGCCGTGAGCTCGATCTGGTTGCGTCTATCGCTGTTCTACGTC
TTGGGATCGCTGATGATCACCATCACGGTGTCACCGAAGGATCCTAACCT
TTTCGGTGGCAGCGGCGTCAACGCATCGCCATTTGTCATTGCCTATCGCA
ACGCGGGTCTTGCTCCATTGGCACACATCATGAATGCGGTGATCTTCATC
TCTGTGTTGTCCACGGGAAGTATTTCTGCCTATGGTGGTTCGCGGACACT
GATGGGGTTGACACACTTGAATCTTGCGCCGAAGGGTATCGTCACGGTCC
TCAATTTTTGGACAGATAAGGTGCCCATTGCGGCCTGGATCACAATCTTC
TGGGTAGTGATCATCTTCATTAATGTTTTTGCGGTCCGGTTCTTTGGCGA
GGTGGAGGTCATTGCCTCCTCTATCAAGTTTGGATGGATCTTCGTGGTCA
TTATCTCTCTGATCGATGATGGCCGATCACTCTACCATGGCGGCCTACGA
AACGTCGAGTAATCGGAGCCCGCAGGATGCTGAGAAGAAAGGCGAGCCCA
TGGAGCGCTGGGCATCTGTGGATGTTGACTACGGTGCTGAAACCGATCTC
AAGCGGAGCTTGTCCACGCGGCATCTGACTATGATTGCGCTGGGGTCATC
GATTGGTATGGGATTATGGCTGGGAAGTGGTGAATCGCTGGAGAATGGTG
GTCCCGCAGCCATCTTCATTGGCTACCTGCTGAGTGGCACGATGATATGG
TCCGTCAGCCACTCCATCGGTGAGATGGCCGTTATGTATCCTCTGCCATC
CGCATTCACTCAGTGGACGGAGATCTTCATCGACAGATCGGCGGCCTTCG
CGCTGGGCTGGGCGTATTGGTTCTCCTACTTTATCACGATCGCAAACGAA
CTTCAGATCTTCGGCAAGGCCGACAAATCCGGTCGCCCCGTCGCCGGACT
GGTCATCACGCTTGTCATTGGCGGCGGCTTGGCCTACCTCAACGTCAACA
ACAAGGGTTCGACGGTCTTCACCTGGTTCTCGAACCTGACCTCCCTCTTC
ACGCTCTTCGGATGGGGCACCATCTGCCTCTCTCACCTCCGTATGCGCTA
CGCCTGGAAGATCCAAGGGCGCTCCGTCGAAGACCTCCCCTGGCGGTCCT
GGACCTACCCCTACGGGGCCATCTGGGGCTTGACCTGGTGCATTCTGCTG
ATCATCGCCGAGTTCTATCTCAGTTTGTGGCCACTGGGCGGCAATCCCAC
GGCCAAGGGCTTCTTCGCGAACTATGTCTCGGTGGTAGCGATCGTGGTGC
TGTATATCGGGGCGCGCTGCTACTACCGCGGACGGTGGTGGGTGGATGCG
AGCACGATTGACCTCGATGGCCCTCGGCGGTTCTATGCCGATGTGGCGGA
TGTCGAGGCGAGGCCGGCCAAGACGGGGGTGAAGAAGTATGCGTCGATGG
TGGTGTCGGCTATTCTTGAGTAGTGATTTCCGCCGGCGGCGCGCCCGACG
AAGGACCGATCGGCTTCCGTTACTGGAACTCGATGCCATTTACCAACGGC
TTCAAAGGCTTCCTGTCCGTCATGCCCACCTGCATCTTCGCCATGTCCGG
TTCGGAGAACTCGGCGCTGGTCGCAGCAGAGACAGATAACCCGCGCAAGG
CGGTGCCACGCGCCGTGAGCTCGATCTGGTTGCGTCTATCGCTGTTCTAC
GTCTTGGGATCGCTGATGATCACCATCACGGTGTCACCGAAGGATCCTAA
CCTTTTCGGTGGCAGCGGCGTCAACGCATCGCCATTTGTCATTGCCTATC
GCAACGCGGGTCTTGCTCCATTGGCACACATCATGAATGCGGTGATCTTC
ATCTCTGTGTTGTCCACGGGAAGTATTTCTGCCTATGGTGGTTCGCGGAC
ACTGATGGGGTTGACACACTTGAATCTTGCGCCGAAGGGTATCGTCACGG
TCCTCAATTTTTGGACAGATAAGGTGCCCATTGCGGCCTGGATCACAATC
TTCTGGGTAGTGATCATCTTCATTAATGTTTTTGCGGTCCGGTTCTTTGG
CGAGGTGGAGGTCATTGCCTCCTCTATCAAGTTTGGATGGATCTTCGTGG
TCATTATCTCTCTGATCGATGATGGCCGATCACTCTACCATGGCGGCCTA
CGAAACGTCGAGTAATCGGAGCCCGCAGGATGCTGAGAAGAAAGGCGAGC
CCATGGAGCGCTGGGCATCTGTGGATGTTGACTACGGTGCTGAAACCGAT
CTCAAGCGGAGCTTGTCCACGCGGCATCTGACTATGATTGCGCTGGGGTC
ATCGATTGGTATGGGATTATGGCTGGGAAGTGGTGAATCGCTGGAGAATG
GTGGTCCCGCAGCCATCTTCATTGGCTACCTGCTGAGTGGCACGATGATA
TGGTCCGTCAGCCACTCCATCGGTGAGATGGCCGTTATGTATCCTCTGCC
ATCCGCATTCACTCAGTGGACGGAGATCTTCATCGACAGATCGGCGGCCT
TCGCGCTGGGCTGGGCGTATTGGTTCTCCTACTTTATCACGATCGCAAAC
GAACTTCAGATCTTCGGCAAGGCCGACAAATCCGGTCGCCCCGTCGCCGG
ACTGGTCATCACGCTTGTCATTGGCGGCGGCTTGGCCTACCTCAACGTCA
ACAACAAGGGTTCGACGGTCTTCACCTGGTTCTCGAACCTGACCTCCCTC
TTCACGCTCTTCGGATGGGGCACCATCTGCCTCTCTCACCTCCGTATGCG
CTACGCCTGGAAGATCCAAGGGCGCTCCGTCGAAGACCTCCCCTGGCGGT
CCTGGACCTACCCCTACGGGGCCATCTGGGGCTTGACCTGGTGCATTCTG
CTGATCATCGCCGAGTTCTATCTCAGTTTGTGGCCACTGGGCGGCAATCC
CACGGCCAAGGGCTTCTTCGCGAACTATGTCTCGGTGGTAGCGATCGTGG
TGCTGTATATCGGGGCGCGCTGCTACTACCGCGGACGGTGGTGGGTGGAT
GCGAGCACGATTGACCTCGATGGCCCTCGGCGGTTCTATGCCGATGTGGC
GGATGTCGAGGCGAGGCCGGCCAAGACGGGGGTGAAGAAGTATGCGTCGA
TGGTGGTGTCGGCTATTCTTGAGTAGTGATTTCCGCCGGCGGCGCGCCCG
ACGAAGGACCGATCGGCTTCCGTTACTGGAACTCGATGCCATTTACCAAC
GGCTTCAAAGGCTTCCTGTCCGTCATGCCCACCTGCATCTTCGCCATGTC
CGGTTCGGAGAACTCGGCGCTGGTCGCAGCAGAGACAGATAACCCGCGCA
AGGCGGTGCCACGCGCCGTGAGCTCGATCTGGTTGCGTCTATCGCTGTTC
TACGTCTTGGGATCGCTGATGATCACCATCACGGTGTCACCGAAGGATCC
TAACCTTTTCGGTGGCAGCGGCGTCAACGCATCGCCATTTGTCATTGCCT
ATCGCAACGCGGGTCTTGCTCCATTGGCACACATCATGAATGCGGTGATC
TTCATCTCTGTGTTGTCCACGGGAAGTATTTCTGCCTATGGTGGTTCGCG
GACACTGATGGGGTTGACACACTTGAATCTTGCGCCGAAGGGTATCGTCA
CGGTCCTCAATTTTTGGACAGATAAGGTGCCCATTGCGGCCTGGATCACA
ATCTTCTGGGTAGTGATCATCTTCATTAATGTTTTTGCGGTCCGGTTCTT
TGGCGAGGTGGAGGTCATTGCCTCCTCTATCAAGTTTGGATGGATCTTCG
TGGTCATTATCTCTCTGATCGATGATGGCCGATCACTCTACCATGGCGGC
CTACGAAACGTCGAGTAATCGGAGCCCGCAGGATGCTGAGAAGAAAGGCG
AGCCCATGGAGCGCTGGGCATCTGTGGATGTTGACTACGGTGCTGAAACC
GATCTCAAGCGGAGCTTGTCCACGCGGCATCTGACTATGATTGCGCTGGG
GTCATCGATTGGTATGGGATTATGGCTGGGAAGTGGTGAATCGCTGGAGA
ATGGTGGTCCCGCAGCCATCTTCATTGGCTACCTGCTGAGTGGCACGATG
ATATGGTCCGTCAGCCACTCCATCGGTGAGATGGCCGTTATGTATCCTCT
GCCATCCGCATTCACTCAGTGGACGGAGATCTTCATCGACAGATCGGCGG
CCTTCGCGCTGGGCTGGGCGTATTGGTTCTCCTACTTTATCACGATCGCA
AACGAACTTCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006865amino acid transport
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007884KJC3_007884Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007884-T1KJC3_007884-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007884-T1.cdsKJC3_007884-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007884-T1.utr3p1KJC3_007884-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007884-T1.exon4KJC3_007884-T1.exon4Aspergillus niger KJC3exon
KJC3_007884-T1.exon3KJC3_007884-T1.exon3Aspergillus niger KJC3exon
KJC3_007884-T1.exon2KJC3_007884-T1.exon2Aspergillus niger KJC3exon
KJC3_007884-T1.exon1KJC3_007884-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007884-T1.utr5p1KJC3_007884-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR004840
DBxrefInterPro:IPR004841
DBxrefPFAM:PF13520
DBxrefPFAM:PF00324
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:355416..357513 -
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