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KJC3_007885-T2, KJC3_007885-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007885-T2
Unique NameKJC3_007885-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:362008..364079+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007885-T2 ID=KJC3_007885-T2|Name=KJC3_007885-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2072bp|location=Sequence derived from alignment at ch6:362008..364079+ (Aspergillus niger KJC3)
GTTGAAGCCGTACCGGCGCGATGCAGCTTCGGCAGCTAGTCACGAAGTGC
TCTATAAATGTAGCCCGGGTCCCGGGTTGCTTCTCCGCATTCCACCCCGG
TTGCAGTCCACTCGTCGTGAACAGCTCGGTGAGACCGTTGGACATCATGT
ATCGCATTTCGAATATCTACGGTATGGCTTAAGTATCTGACGGCGGCCGC
GTTGCTAAAGCTAACGGAGTCACAGTCCTGGCTGGCTTCGGCACCATTGG
CGGTGCCTTGTTCGGCTTCGATGTCAGCTCCATGAGTGCCTGGATTGGCA
CGGATCAGTATCTGGAATACTTCAACCACCCAGATTCCGACTTGCAAGGT
GGTGTAAGTAACCAAGCCACTTCCCCAGAGCAGCAGTATGGATACGAAGT
ACTGATGGTAGGATGGGGCACTCCTAGATTACCGCTTCCATGTCTGCTGG
CTCCTTTGCCGGTGCACTCGCTGCCGGCTTCATATCAGACCGAATTGGTC
GTCGTTACTCCCTTATGCTAGCGTGTTGCATCTGGGTCATCGGCGCTGCG
ATTCAATGTAGCGCCCAAAATGTCGCCCACCTGGTCGCCGGGAGAGTTAT
CAGCGGCCTGTCCGGTATGAATCCTCAGCTGTATATCTGGAGTCCTGCAC
GTGCTAAACAACTCTTCTAGTCGGTATTACATCCTCACAGGTCTGCGTTT
ATCTCGCTGAACTAGCTCCGGCTCGGATTCGTGGTCGTATCGTCGGCATT
CAGCAATGGGCCATCGAATGGGGTATGCTCATCATGTATCTGATCTCGTA
CGGATGCGGCCAAGGTCTGGCTGGAGCAGCTTCTTTCCGAGTATCATGGG
GTGTTCAGGGTATCCCGGCCCTCATCCTACTTGCCGCATTACCCTTCTTC
CCCGAATCTCCTCGTTGGCTGGCAAGTAAAGAGCGCTGGGAGGAGGCTTT
GGATACTTTAGCGCTGCTGCATGCCAAGGGCGACCGCAACGATCCCGTGG
TCCAAGTGGAATACGAAGAAGTGCAGGAAGCAGCACGCATTGCCCAGGAG
GCCAAGGACATTTCTTTCTTTTCACTGTTCGGACCAAAGATTTGGAAGCG
AACCCTTTGCGGTGTCAGCGCCCAGGTCTGGCAGCAGTTGCTCGGAGGCA
ATGTTGCGATGTACTACGTCGTGTACATCTTCAACATGGCTGGCATGGTA
AGTCTATTTCTACTTCAAGAGGCAGGCCATGAAGCTCAACTGACGCTCTT
TCTTAGTCTGGAAACACCACCCTGTACTCGTCAGCCATCCAGTACGTCAT
CTTCTTAGTCACAACGGGTACTATTCTGCCATTTGTTGATCGTATCGGTC
GACGGCTTTTGCTCCTCACTGGATCCGTCCTCTGCATGGCTTGCCACTTT
GCTATTGCTGGTCTTATGGCTTCACGTGGTCATCATGTTGACTCGGTCGA
TGGCAATGCGAACCTGAAGTGGTCAATTACGGGACCACCCGGCAAAGGTG
TCATCGCCTGCTCGTACATCTTCGTTGCCGTTTATGGTTTCACCTGGGTA
CGTTGTTGTTTTCAATCCCTCGCGACGATTCAAGGTCAGCCTCAGCTAAC
GTGACATGAAATAGGCCCCAGTAGCATGGATCTATGCTTCTGAAGTCTTC
CCCCTTAAGTACCGTGCAAAGGGTGTCGGTCTCTCAGCTGCGGGTAACTG
GATTTTCAACTTCGCGTTGGCGTACTTTGTGGCTCCTGCTTTCACCAACA
TTCAGTGGAAGACTTATATCATCTTCGGTGTCTTTTGCACTGTGATGACG
TTCCATGTGTTCTTTTTCTACCCGGAGACTGCTCGACGATCGCTTGAAGA
CATTGACTTGATGTTTGAGACGGACATGAAGCCCTGGAAGACGCACCAGA
TTCATGACCGCTTCGGCGAAGAAGTTGAGCGACACAAGCACAAGGACATG
GCTGACCAAGAAAAGGGAGTTGTGTCGACCCATGACGAAATGGCGTGATG
GGCTATATTTGTTCGAATGAGTTAGCGACCCTACATGAGCACACAGAACG
AATATATGGAATCTTAATGGAA
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Coding sequence (CDS) from alignment at ch6:362008..364079+

>KJC3_007885-T2 ID=KJC3_007885-T2|Name=KJC3_007885-T2|organism=Aspergillus niger KJC3|type=CDS|length=5508bp|location=Sequence derived from alignment at ch6:362008..364079+ (Aspergillus niger KJC3)
ATGTCTGCTGGCTCCTTTGCCGGTGCACTCGCTGCCGGCTTCATATCAGA
CCGAATTGGTCGTCGTTACTCCCTTATGCTAGCGTGTTGCATCTGGGTCA
TCGGCGCTGCGATTCAATGTAGCGCCCAAAATGTCGCCCACCTGGTCGCC
GGGAGAGTTATCAGCGGCCTGTCCGTCGGTATTACATCCTCACAGGTCTG
CGTTTATCTCGCTGAACTAGCTCCGGCTCGGATTCGTGGTCGTATCGTCG
GCATTCAGCAATGGGCCATCGAATGGGGTATGCTCATCATGTATCTGATC
TCGTACGGATGCGGCCAAGGTCTGGCTGGAGCAGCTTCTTTCCGAGTATC
ATGGGGTGTTCAGGGTATCCCGGCCCTCATCCTACTTGCCGCATTACCCT
TCTTCCCCGAATCTCCTCGTTGGCTGGCAAGTAAAGAGCGCTGGGAGGAG
GCTTTGGATACTTTAGCGCTGCTGCATGCCAAGGGCGACCGCAACGATCC
CGTGGTCCAAGTGGAATACGAAGAAGTGCAGGAAGCAGCACGCATTGCCC
AGGAGGCCAAGGACATTTCTTTCTTTTCACTGTTCGGACCAAAGATTTGG
AAGCGAACCCTTTGCGGTGTCAGCGCCCAGGTCTGGCAGCAGTTGCTCGG
AGGCAATGTTGCGATGTACTACGTCGTGTACATCTTCAACATGGCTGGCA
TGTCTGGAAACACCACCCTGTACTCGTCAGCCATCCAGTACGTCATCTTC
TTAGTCACAACGGGTACTATTCTGCCATTTGTTGATCGTATCGGTCGACG
GCTTTTGCTCCTCACTGGATCCGTCCTCTGCATGGCTTGCCACTTTGCTA
TTGCTGGTCTTATGGCTTCACGTGGTCATCATGTTGACTCGGTCGATGGC
AATGCGAACCTGAAGTGGTCAATTACGGGACCACCCGGCAAAGGTGTCAT
CGCCTGCTCGTACATCTTCGTTGCCGTTTATGGTTTCACCTGGGCCCCAG
TAGCATGGATCTATGCTTCTGAAGTCTTCCCCCTTAAGTACCGTGCAAAG
GGTGTCGGTCTCTCAGCTGCGGGTAACTGGATTTTCAACTTCGCGTTGGC
GTACTTTGTGGCTCCTGCTTTCACCAACATTCAGTGGAAGACTTATATCA
TCTTCGGTGTCTTTTGCACTGTGATGACGTTCCATGTGTTCTTTTTCTAC
CCGGAGACTGCTCGACGATCGCTTGAAGACATTGACTTGATGTTTGAGAC
GGACATGAAGCCCTGGAAGACGCACCAGATTCATGACCGCTTCGGCGAAG
AAGTTGAGCGACACAAGCACAAGGACATGGCTGACCAAGAAAAGGGAGTT
GTGTCGACCCATGACGAAATGGCGTGAATGTCTGCTGGCTCCTTTGCCGG
TGCACTCGCTGCCGGCTTCATATCAGACCGAATTGGTCGTCGTTACTCCC
TTATGCTAGCGTGTTGCATCTGGGTCATCGGCGCTGCGATTCAATGTAGC
GCCCAAAATGTCGCCCACCTGGTCGCCGGGAGAGTTATCAGCGGCCTGTC
CGTCGGTATTACATCCTCACAGGTCTGCGTTTATCTCGCTGAACTAGCTC
CGGCTCGGATTCGTGGTCGTATCGTCGGCATTCAGCAATGGGCCATCGAA
TGGGGTATGCTCATCATGTATCTGATCTCGTACGGATGCGGCCAAGGTCT
GGCTGGAGCAGCTTCTTTCCGAGTATCATGGGGTGTTCAGGGTATCCCGG
CCCTCATCCTACTTGCCGCATTACCCTTCTTCCCCGAATCTCCTCGTTGG
CTGGCAAGTAAAGAGCGCTGGGAGGAGGCTTTGGATACTTTAGCGCTGCT
GCATGCCAAGGGCGACCGCAACGATCCCGTGGTCCAAGTGGAATACGAAG
AAGTGCAGGAAGCAGCACGCATTGCCCAGGAGGCCAAGGACATTTCTTTC
TTTTCACTGTTCGGACCAAAGATTTGGAAGCGAACCCTTTGCGGTGTCAG
CGCCCAGGTCTGGCAGCAGTTGCTCGGAGGCAATGTTGCGATGTACTACG
TCGTGTACATCTTCAACATGGCTGGCATGTCTGGAAACACCACCCTGTAC
TCGTCAGCCATCCAGTACGTCATCTTCTTAGTCACAACGGGTACTATTCT
GCCATTTGTTGATCGTATCGGTCGACGGCTTTTGCTCCTCACTGGATCCG
TCCTCTGCATGGCTTGCCACTTTGCTATTGCTGGTCTTATGGCTTCACGT
GGTCATCATGTTGACTCGGTCGATGGCAATGCGAACCTGAAGTGGTCAAT
TACGGGACCACCCGGCAAAGGTGTCATCGCCTGCTCGTACATCTTCGTTG
CCGTTTATGGTTTCACCTGGGCCCCAGTAGCATGGATCTATGCTTCTGAA
GTCTTCCCCCTTAAGTACCGTGCAAAGGGTGTCGGTCTCTCAGCTGCGGG
TAACTGGATTTTCAACTTCGCGTTGGCGTACTTTGTGGCTCCTGCTTTCA
CCAACATTCAGTGGAAGACTTATATCATCTTCGGTGTCTTTTGCACTGTG
ATGACGTTCCATGTGTTCTTTTTCTACCCGGAGACTGCTCGACGATCGCT
TGAAGACATTGACTTGATGTTTGAGACGGACATGAAGCCCTGGAAGACGC
ACCAGATTCATGACCGCTTCGGCGAAGAAGTTGAGCGACACAAGCACAAG
GACATGGCTGACCAAGAAAAGGGAGTTGTGTCGACCCATGACGAAATGGC
GTGAATGTCTGCTGGCTCCTTTGCCGGTGCACTCGCTGCCGGCTTCATAT
CAGACCGAATTGGTCGTCGTTACTCCCTTATGCTAGCGTGTTGCATCTGG
GTCATCGGCGCTGCGATTCAATGTAGCGCCCAAAATGTCGCCCACCTGGT
CGCCGGGAGAGTTATCAGCGGCCTGTCCGTCGGTATTACATCCTCACAGG
TCTGCGTTTATCTCGCTGAACTAGCTCCGGCTCGGATTCGTGGTCGTATC
GTCGGCATTCAGCAATGGGCCATCGAATGGGGTATGCTCATCATGTATCT
GATCTCGTACGGATGCGGCCAAGGTCTGGCTGGAGCAGCTTCTTTCCGAG
TATCATGGGGTGTTCAGGGTATCCCGGCCCTCATCCTACTTGCCGCATTA
CCCTTCTTCCCCGAATCTCCTCGTTGGCTGGCAAGTAAAGAGCGCTGGGA
GGAGGCTTTGGATACTTTAGCGCTGCTGCATGCCAAGGGCGACCGCAACG
ATCCCGTGGTCCAAGTGGAATACGAAGAAGTGCAGGAAGCAGCACGCATT
GCCCAGGAGGCCAAGGACATTTCTTTCTTTTCACTGTTCGGACCAAAGAT
TTGGAAGCGAACCCTTTGCGGTGTCAGCGCCCAGGTCTGGCAGCAGTTGC
TCGGAGGCAATGTTGCGATGTACTACGTCGTGTACATCTTCAACATGGCT
GGCATGTCTGGAAACACCACCCTGTACTCGTCAGCCATCCAGTACGTCAT
CTTCTTAGTCACAACGGGTACTATTCTGCCATTTGTTGATCGTATCGGTC
GACGGCTTTTGCTCCTCACTGGATCCGTCCTCTGCATGGCTTGCCACTTT
GCTATTGCTGGTCTTATGGCTTCACGTGGTCATCATGTTGACTCGGTCGA
TGGCAATGCGAACCTGAAGTGGTCAATTACGGGACCACCCGGCAAAGGTG
TCATCGCCTGCTCGTACATCTTCGTTGCCGTTTATGGTTTCACCTGGGCC
CCAGTAGCATGGATCTATGCTTCTGAAGTCTTCCCCCTTAAGTACCGTGC
AAAGGGTGTCGGTCTCTCAGCTGCGGGTAACTGGATTTTCAACTTCGCGT
TGGCGTACTTTGTGGCTCCTGCTTTCACCAACATTCAGTGGAAGACTTAT
ATCATCTTCGGTGTCTTTTGCACTGTGATGACGTTCCATGTGTTCTTTTT
CTACCCGGAGACTGCTCGACGATCGCTTGAAGACATTGACTTGATGTTTG
AGACGGACATGAAGCCCTGGAAGACGCACCAGATTCATGACCGCTTCGGC
GAAGAAGTTGAGCGACACAAGCACAAGGACATGGCTGACCAAGAAAAGGG
AGTTGTGTCGACCCATGACGAAATGGCGTGAATGTCTGCTGGCTCCTTTG
CCGGTGCACTCGCTGCCGGCTTCATATCAGACCGAATTGGTCGTCGTTAC
TCCCTTATGCTAGCGTGTTGCATCTGGGTCATCGGCGCTGCGATTCAATG
TAGCGCCCAAAATGTCGCCCACCTGGTCGCCGGGAGAGTTATCAGCGGCC
TGTCCGTCGGTATTACATCCTCACAGGTCTGCGTTTATCTCGCTGAACTA
GCTCCGGCTCGGATTCGTGGTCGTATCGTCGGCATTCAGCAATGGGCCAT
CGAATGGGGTATGCTCATCATGTATCTGATCTCGTACGGATGCGGCCAAG
GTCTGGCTGGAGCAGCTTCTTTCCGAGTATCATGGGGTGTTCAGGGTATC
CCGGCCCTCATCCTACTTGCCGCATTACCCTTCTTCCCCGAATCTCCTCG
TTGGCTGGCAAGTAAAGAGCGCTGGGAGGAGGCTTTGGATACTTTAGCGC
TGCTGCATGCCAAGGGCGACCGCAACGATCCCGTGGTCCAAGTGGAATAC
GAAGAAGTGCAGGAAGCAGCACGCATTGCCCAGGAGGCCAAGGACATTTC
TTTCTTTTCACTGTTCGGACCAAAGATTTGGAAGCGAACCCTTTGCGGTG
TCAGCGCCCAGGTCTGGCAGCAGTTGCTCGGAGGCAATGTTGCGATGTAC
TACGTCGTGTACATCTTCAACATGGCTGGCATGTCTGGAAACACCACCCT
GTACTCGTCAGCCATCCAGTACGTCATCTTCTTAGTCACAACGGGTACTA
TTCTGCCATTTGTTGATCGTATCGGTCGACGGCTTTTGCTCCTCACTGGA
TCCGTCCTCTGCATGGCTTGCCACTTTGCTATTGCTGGTCTTATGGCTTC
ACGTGGTCATCATGTTGACTCGGTCGATGGCAATGCGAACCTGAAGTGGT
CAATTACGGGACCACCCGGCAAAGGTGTCATCGCCTGCTCGTACATCTTC
GTTGCCGTTTATGGTTTCACCTGGGCCCCAGTAGCATGGATCTATGCTTC
TGAAGTCTTCCCCCTTAAGTACCGTGCAAAGGGTGTCGGTCTCTCAGCTG
CGGGTAACTGGATTTTCAACTTCGCGTTGGCGTACTTTGTGGCTCCTGCT
TTCACCAACATTCAGTGGAAGACTTATATCATCTTCGGTGTCTTTTGCAC
TGTGATGACGTTCCATGTGTTCTTTTTCTACCCGGAGACTGCTCGACGAT
CGCTTGAAGACATTGACTTGATGTTTGAGACGGACATGAAGCCCTGGAAG
ACGCACCAGATTCATGACCGCTTCGGCGAAGAAGTTGAGCGACACAAGCA
CAAGGACATGGCTGACCAAGAAAAGGGAGTTGTGTCGACCCATGACGAAA
TGGCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007885KJC3_007885Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007885-T2KJC3_007885-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007885-T2.utr5p1KJC3_007885-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_007885-T2.utr5p2KJC3_007885-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_007885-T2.utr5p3KJC3_007885-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007885-T2.exon1KJC3_007885-T2.exon1Aspergillus niger KJC3exon
KJC3_007885-T2.exon2KJC3_007885-T2.exon2Aspergillus niger KJC3exon
KJC3_007885-T2.exon3KJC3_007885-T2.exon3Aspergillus niger KJC3exon
KJC3_007885-T2.exon4KJC3_007885-T2.exon4Aspergillus niger KJC3exon
KJC3_007885-T2.exon5KJC3_007885-T2.exon5Aspergillus niger KJC3exon
KJC3_007885-T2.exon6KJC3_007885-T2.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007885-T2.cdsKJC3_007885-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007885-T2.utr3p1KJC3_007885-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:362008..364079 +
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