You are here

Home

KJC3_007894-T1, KJC3_007894-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007894-T1
Unique NameKJC3_007894-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:381829..382899-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007894-T1 ID=KJC3_007894-T1|Name=KJC3_007894-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1071bp|location=Sequence derived from alignment at ch6:381829..382899- (Aspergillus niger KJC3)
ATGTCCGAAGCACCTAATCCTCCTGTTCAAGGCCGCCTTATTAGCCATTT
TGCCGACCGGTACGCTGGGAATTTTTGCTCGCATTAAAGGCCCGGACCGA
ACCTAGCTAACTCATACCAGGAGAGCGGAGGACCAAGGCTCAGGCTGGTC
CGCACTCTGGGACTCCAACGAGAGCGATCTTTGGGATAGAGGGAGTCCTT
CAATCGCACTAGTCGATGTAGTAGAGCAGCAGCAGGATGTCTTCTTTCCA
TATACTCGCGATGGACGAAGGAAGAAAGCTCTCGTTCCGGTAATTCTCTC
CCCTTTCCACCAGCCAGTCAGCAGGCCGGAGGTTCGCGGAATCGCTATGA
AGAATCTTGTATAATATACTAACTAGCTATGATACTCTTGCAGGGCTGTG
GACGAGGCTATGATCCCGTCATGTTAGCTCTGCATGGCTTTGATGTCTAC
GGTCTCGATATATCCACCACTGGTGTTTCAGAGGCAACAAAGTACGCCAC
CTCTGAAATGCAGAGTCCACAAGGGTATAACTTCTCCGCAGGAGCCGTCA
CTACTAGCGATGTAGGGAGTGTAAAATTTATTGCGGGTGACTTTTTCAGC
TCCAAGTGGGAGAGTCAAGCTCTACAGGATGGTGACAAGTTCGATTTGAT
CTATGACTATACGGTATATTACCCCCGGACACCCGGCCTATGTGCTACAA
AACAACCTCCAAAAACAAGCAACGAAGCTCACAATCAACAGTTCCTCTGT
GCCCTCCACCCGGACCTCCGTCGAAAATGGGCTGAGCGGATGAGCCAGCT
CCTCCATCCCGGAGGCTTGCTCGTCTGTCTTGAGTTTCCCATGTACAAGG
ACACCTCCTTACCAGGCCCACCGTGGGGACTGAATGGAGTCCACTGGGAT
CTGCTGGCGCGCGGCGGGGACGGGATCACTAACATTACTAAAGAGGAAGA
AGACGAAGATTCTGGTATTCAGCTGTCAGGGCAGTTTCGGCGAGCACAAT
ACTTTAGGCCTATACGGTCGTATCCAAGCGGCAAAGGCACGGATATGCTG
AGTATTTATGTGAGAAGGTGA
back to top

Coding sequence (CDS) from alignment at ch6:381829..382899-

>KJC3_007894-T1 ID=KJC3_007894-T1|Name=KJC3_007894-T1|organism=Aspergillus niger KJC3|type=CDS|length=3312bp|location=Sequence derived from alignment at ch6:381829..382899- (Aspergillus niger KJC3)
TTCCTCTGTGCCCTCCACCCGGACCTCCGTCGAAAATGGGCTGAGCGGAT
GAGCCAGCTCCTCCATCCCGGAGGCTTGCTCGTCTGTCTTGAGTTTCCCA
TGTACAAGGACACCTCCTTACCAGGCCCACCGTGGGGACTGAATGGAGTC
CACTGGGATCTGCTGGCGCGCGGCGGGGACGGGATCACTAACATTACTAA
AGAGGAAGAAGACGAAGATTCTGGTATTCAGCTGTCAGGGCAGTTTCGGC
GAGCACAATACTTTAGGCCTATACGGTCGTATCCAAGCGGCAAAGGCACG
GATATGCTGAGTATTTATGTGAGAAGGTGAGGCTGTGGACGAGGCTATGA
TCCCGTCATGTTAGCTCTGCATGGCTTTGATGTCTACGGTCTCGATATAT
CCACCACTGGTGTTTCAGAGGCAACAAAGTACGCCACCTCTGAAATGCAG
AGTCCACAAGGGTATAACTTCTCCGCAGGAGCCGTCACTACTAGCGATGT
AGGGAGTGTAAAATTTATTGCGGGTGACTTTTTCAGCTCCAAGTGGGAGA
GTCAAGCTCTACAGGATGGTGACAAGTTCGATTTGATCTATGACTATACG
GAGAGCGGAGGACCAAGGCTCAGGCTGGTCCGCACTCTGGGACTCCAACG
AGAGCGATCTTTGGGATAGAGGGAGTCCTTCAATCGCACTAGTCGATGTA
GTAGAGCAGCAGCAGGATGTCTTCTTTCCATATACTCGCGATGGACGAAG
GAAGAAAGCTCTCGTTCCGATGTCCGAAGCACCTAATCCTCCTGTTCAAG
GCCGCCTTATTAGCCATTTTGCCGACCGTTCCTCTGTGCCCTCCACCCGG
ACCTCCGTCGAAAATGGGCTGAGCGGATGAGCCAGCTCCTCCATCCCGGA
GGCTTGCTCGTCTGTCTTGAGTTTCCCATGTACAAGGACACCTCCTTACC
AGGCCCACCGTGGGGACTGAATGGAGTCCACTGGGATCTGCTGGCGCGCG
GCGGGGACGGGATCACTAACATTACTAAAGAGGAAGAAGACGAAGATTCT
GGTATTCAGCTGTCAGGGCAGTTTCGGCGAGCACAATACTTTAGGCCTAT
ACGGTCGTATCCAAGCGGCAAAGGCACGGATATGCTGAGTATTTATGTGA
GAAGGTGAGGCTGTGGACGAGGCTATGATCCCGTCATGTTAGCTCTGCAT
GGCTTTGATGTCTACGGTCTCGATATATCCACCACTGGTGTTTCAGAGGC
AACAAAGTACGCCACCTCTGAAATGCAGAGTCCACAAGGGTATAACTTCT
CCGCAGGAGCCGTCACTACTAGCGATGTAGGGAGTGTAAAATTTATTGCG
GGTGACTTTTTCAGCTCCAAGTGGGAGAGTCAAGCTCTACAGGATGGTGA
CAAGTTCGATTTGATCTATGACTATACGGAGAGCGGAGGACCAAGGCTCA
GGCTGGTCCGCACTCTGGGACTCCAACGAGAGCGATCTTTGGGATAGAGG
GAGTCCTTCAATCGCACTAGTCGATGTAGTAGAGCAGCAGCAGGATGTCT
TCTTTCCATATACTCGCGATGGACGAAGGAAGAAAGCTCTCGTTCCGATG
TCCGAAGCACCTAATCCTCCTGTTCAAGGCCGCCTTATTAGCCATTTTGC
CGACCGTTCCTCTGTGCCCTCCACCCGGACCTCCGTCGAAAATGGGCTGA
GCGGATGAGCCAGCTCCTCCATCCCGGAGGCTTGCTCGTCTGTCTTGAGT
TTCCCATGTACAAGGACACCTCCTTACCAGGCCCACCGTGGGGACTGAAT
GGAGTCCACTGGGATCTGCTGGCGCGCGGCGGGGACGGGATCACTAACAT
TACTAAAGAGGAAGAAGACGAAGATTCTGGTATTCAGCTGTCAGGGCAGT
TTCGGCGAGCACAATACTTTAGGCCTATACGGTCGTATCCAAGCGGCAAA
GGCACGGATATGCTGAGTATTTATGTGAGAAGGTGAGGCTGTGGACGAGG
CTATGATCCCGTCATGTTAGCTCTGCATGGCTTTGATGTCTACGGTCTCG
ATATATCCACCACTGGTGTTTCAGAGGCAACAAAGTACGCCACCTCTGAA
ATGCAGAGTCCACAAGGGTATAACTTCTCCGCAGGAGCCGTCACTACTAG
CGATGTAGGGAGTGTAAAATTTATTGCGGGTGACTTTTTCAGCTCCAAGT
GGGAGAGTCAAGCTCTACAGGATGGTGACAAGTTCGATTTGATCTATGAC
TATACGGAGAGCGGAGGACCAAGGCTCAGGCTGGTCCGCACTCTGGGACT
CCAACGAGAGCGATCTTTGGGATAGAGGGAGTCCTTCAATCGCACTAGTC
GATGTAGTAGAGCAGCAGCAGGATGTCTTCTTTCCATATACTCGCGATGG
ACGAAGGAAGAAAGCTCTCGTTCCGATGTCCGAAGCACCTAATCCTCCTG
TTCAAGGCCGCCTTATTAGCCATTTTGCCGACCGTTCCTCTGTGCCCTCC
ACCCGGACCTCCGTCGAAAATGGGCTGAGCGGATGAGCCAGCTCCTCCAT
CCCGGAGGCTTGCTCGTCTGTCTTGAGTTTCCCATGTACAAGGACACCTC
CTTACCAGGCCCACCGTGGGGACTGAATGGAGTCCACTGGGATCTGCTGG
CGCGCGGCGGGGACGGGATCACTAACATTACTAAAGAGGAAGAAGACGAA
GATTCTGGTATTCAGCTGTCAGGGCAGTTTCGGCGAGCACAATACTTTAG
GCCTATACGGTCGTATCCAAGCGGCAAAGGCACGGATATGCTGAGTATTT
ATGTGAGAAGGTGAGGCTGTGGACGAGGCTATGATCCCGTCATGTTAGCT
CTGCATGGCTTTGATGTCTACGGTCTCGATATATCCACCACTGGTGTTTC
AGAGGCAACAAAGTACGCCACCTCTGAAATGCAGAGTCCACAAGGGTATA
ACTTCTCCGCAGGAGCCGTCACTACTAGCGATGTAGGGAGTGTAAAATTT
ATTGCGGGTGACTTTTTCAGCTCCAAGTGGGAGAGTCAAGCTCTACAGGA
TGGTGACAAGTTCGATTTGATCTATGACTATACGGAGAGCGGAGGACCAA
GGCTCAGGCTGGTCCGCACTCTGGGACTCCAACGAGAGCGATCTTTGGGA
TAGAGGGAGTCCTTCAATCGCACTAGTCGATGTAGTAGAGCAGCAGCAGG
ATGTCTTCTTTCCATATACTCGCGATGGACGAAGGAAGAAAGCTCTCGTT
CCGATGTCCGAAGCACCTAATCCTCCTGTTCAAGGCCGCCTTATTAGCCA
TTTTGCCGACCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008757S-adenosylmethionine-dependent methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007894KJC3_007894Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007894-T1KJC3_007894-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007894-T1.cdsKJC3_007894-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007894-T1.exon4KJC3_007894-T1.exon4Aspergillus niger KJC3exon
KJC3_007894-T1.exon3KJC3_007894-T1.exon3Aspergillus niger KJC3exon
KJC3_007894-T1.exon2KJC3_007894-T1.exon2Aspergillus niger KJC3exon
KJC3_007894-T1.exon1KJC3_007894-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR008854
DBxrefPFAM:PF05724
DBxrefPFAM:PF13847
DBxrefPFAM:PF13649
DBxrefPFAM:PF13489
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:381829..382899 -
Powered by Drupal