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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:402758..404560- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007899-T1 ID=KJC3_007899-T1|Name=KJC3_007899-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1803bp|location=Sequence derived from alignment at ch6:402758..404560- (Aspergillus niger KJC3)
ATGACCCTTGATGCTGAAGTCCAGATAGATCGCAAGGTTAAAAAATATGG
GGGACACGTTAGCAAGGGAGATGTCGAATCCACTGAGACTACTGGACCAG
ATAACCTGGAATCGGATTGGAAACCGACTAAAGAGGTTTTCTTGATCCTA
CTGTGCTTGTCAATCATTGCAATCATGGCTTCGTTGGACATGACTATATT
TTTATCAATCCTTCCAGCGAGTGTCCTCCTCATTGCTCAAACCACCCCTC
AAACCATTGATAACTTCTAATTGCTGAAACAGAGTATTGCCAAGGACTTG
AACGGTGATGCCACCAGCACTTTTTGGGTGGGCAGCGCATACTTGGTGCC
TAGTGCAGGGTTTCAGCCCATTATGGCTTCTTTTTCCGACGTTTATGGGA
GAAGAAGAGTACTGGCCATGGCATTGGCCCTCTTCGTGATTGGCTCAATT
GTGGGATGTCTCGCCCATAATATGGCTACACTTCTCGCCGGGCGTGTCAT
TCAAGGAATCGGAGGAGGCGGACTCATTCCGCTTGCGACGATTATAATTA
CAGATGTAGTGCCTCTACGTCCCAGGCCAAAATACGCTGCCTTGGTTCAG
GCATCCATGGCACTCGGTACTATCCTTGGGCCTCTAATAGGCGGTGCCTT
TTTGGAACATACCAGTAGCTCAACGGGCTGGCGCTGGGTGTTTTACATCA
ACTTCCCCCTATCCACCGCTGCCGGAATTTTGCTTTTCTTTTCGGTCAGG
TTCAAAAGGGGCGGGGCTCAGCTTCGTGCCGTTGATTGGTTTGGCCAAGC
TTTGTTCCTGGCCAGTATCTCCATATTCCTGATCGGCCTCTCGTGGGGTG
GAGTGCAGTACACATGGGAAAGCTATCACACTTTGGTTCCATTGTGTCTT
GGGGTTGGAGGTATTGTCGCGACGGTGTGTTGGGAAATCCTGGGGACTGA
GCATCCTTTTGTGAGGATTTCTGTGCTTCAAGATCGATCTGCTTTGGCTG
TGTATGCGGGGTCTATTGTCCAAGGAATTCTAGTAAGTTCTTGTATTGGC
GCAATTTGGCACTTTGTATAATAGGCCCTTACTGACCCTCAACTAATTTC
TTAGATGTATGGCGAGCTTTATTATATTTCTGTGTATCTGCAGGCTGTGA
AAAGCATGTCCGCGGTCATGACTGGTGTTGGCCTCCTCCCAGTATCGGTT
GCGCTCATGCCCACAAGTATAGTCGTGGCTATTTTCATTTCGAAAACTGG
ACGCTACCGCTGGGCGCTATGGTTTGGTTGGGCCGCTACCATTGCAGCAA
CGGGTGTGACCATTATTCTGGACAGTGATACCAACACAGCCAGCTGGATC
TTCATTTTTGCCTTCGTTGGTTTTGGGCATGGAGTGCTATTCAATGCGCT
TTTAATCTCAGCACAAGCCTCGTGTGCAGCAGCCGACGCAGCATATGCAG
CTTCGATGTATACCTTCTTCCGCACGCTAGGCTTTGCTATTGGAGTGATA
ATCGGCTCTACTGTCTTACAGAACTTCATGTCCATGAAACTCCACGAATT
GGACCTTCCGACTGCGATCGCTCAAAATGCGGAAGGCTTCATTGAAACTC
TTAAAACACTAGCCAGCGGGTCAGCTCTGCGTGAAGGTGTTCTAACCGCC
TATGTGTATGCCTTGGACTCAATATTTGAGGTTCTGACAGGTATTGGAGT
TCTGGGCCTTTTAGCCACTGCATTCGTTGCGGCAAAAACTATGAACAAGC
CGATTGAGTCTGACCATGTTTTACACGACACTTGTGACTCGGCCAAGAAT
TGA back to topCoding sequence (CDS) from alignment at ch6:402758..404560- >KJC3_007899-T1 ID=KJC3_007899-T1|Name=KJC3_007899-T1|organism=Aspergillus niger KJC3|type=CDS|length=4752bp|location=Sequence derived from alignment at ch6:402758..404560- (Aspergillus niger KJC3)
ATGTATGGCGAGCTTTATTATATTTCTGTGTATCTGCAGGCTGTGAAAAG
CATGTCCGCGGTCATGACTGGTGTTGGCCTCCTCCCAGTATCGGTTGCGC
TCATGCCCACAAGTATAGTCGTGGCTATTTTCATTTCGAAAACTGGACGC
TACCGCTGGGCGCTATGGTTTGGTTGGGCCGCTACCATTGCAGCAACGGG
TGTGACCATTATTCTGGACAGTGATACCAACACAGCCAGCTGGATCTTCA
TTTTTGCCTTCGTTGGTTTTGGGCATGGAGTGCTATTCAATGCGCTTTTA
ATCTCAGCACAAGCCTCGTGTGCAGCAGCCGACGCAGCATATGCAGCTTC
GATGTATACCTTCTTCCGCACGCTAGGCTTTGCTATTGGAGTGATAATCG
GCTCTACTGTCTTACAGAACTTCATGTCCATGAAACTCCACGAATTGGAC
CTTCCGACTGCGATCGCTCAAAATGCGGAAGGCTTCATTGAAACTCTTAA
AACACTAGCCAGCGGGTCAGCTCTGCGTGAAGGTGTTCTAACCGCCTATG
TGTATGCCTTGGACTCAATATTTGAGGTTCTGACAGGTATTGGAGTTCTG
GGCCTTTTAGCCACTGCATTCGTTGCGGCAAAAACTATGAACAAGCCGAT
TGAGTCTGACCATGTTTTACACGACACTTGTGACTCGGCCAAGAATTGAA
GTATTGCCAAGGACTTGAACGGTGATGCCACCAGCACTTTTTGGGTGGGC
AGCGCATACTTGGTGCCTAGTGCAGGGTTTCAGCCCATTATGGCTTCTTT
TTCCGACGTTTATGGGAGAAGAAGAGTACTGGCCATGGCATTGGCCCTCT
TCGTGATTGGCTCAATTGTGGGATGTCTCGCCCATAATATGGCTACACTT
CTCGCCGGGCGTGTCATTCAAGGAATCGGAGGAGGCGGACTCATTCCGCT
TGCGACGATTATAATTACAGATGTAGTGCCTCTACGTCCCAGGCCAAAAT
ACGCTGCCTTGGTTCAGGCATCCATGGCACTCGGTACTATCCTTGGGCCT
CTAATAGGCGGTGCCTTTTTGGAACATACCAGTAGCTCAACGGGCTGGCG
CTGGGTGTTTTACATCAACTTCCCCCTATCCACCGCTGCCGGAATTTTGC
TTTTCTTTTCGGTCAGGTTCAAAAGGGGCGGGGCTCAGCTTCGTGCCGTT
GATTGGTTTGGCCAAGCTTTGTTCCTGGCCAGTATCTCCATATTCCTGAT
CGGCCTCTCGTGGGGTGGAGTGCAGTACACATGGGAAAGCTATCACACTT
TGGTTCCATTGTGTCTTGGGGTTGGAGGTATTGTCGCGACGGTGTGTTGG
GAAATCCTGGGGACTGAGCATCCTTTTGTGAGGATTTCTGTGCTTCAAGA
TCGATCTGCTTTGGCTGTGTATGCGGGGTCTATTGTCCAAGGAATTCTAA
TGACCCTTGATGCTGAAGTCCAGATAGATCGCAAGGTTAAAAAATATGGG
GGACACGTTAGCAAGGGAGATGTCGAATCCACTGAGACTACTGGACCAGA
TAACCTGGAATCGGATTGGAAACCGACTAAAGAGATGTATGGCGAGCTTT
ATTATATTTCTGTGTATCTGCAGGCTGTGAAAAGCATGTCCGCGGTCATG
ACTGGTGTTGGCCTCCTCCCAGTATCGGTTGCGCTCATGCCCACAAGTAT
AGTCGTGGCTATTTTCATTTCGAAAACTGGACGCTACCGCTGGGCGCTAT
GGTTTGGTTGGGCCGCTACCATTGCAGCAACGGGTGTGACCATTATTCTG
GACAGTGATACCAACACAGCCAGCTGGATCTTCATTTTTGCCTTCGTTGG
TTTTGGGCATGGAGTGCTATTCAATGCGCTTTTAATCTCAGCACAAGCCT
CGTGTGCAGCAGCCGACGCAGCATATGCAGCTTCGATGTATACCTTCTTC
CGCACGCTAGGCTTTGCTATTGGAGTGATAATCGGCTCTACTGTCTTACA
GAACTTCATGTCCATGAAACTCCACGAATTGGACCTTCCGACTGCGATCG
CTCAAAATGCGGAAGGCTTCATTGAAACTCTTAAAACACTAGCCAGCGGG
TCAGCTCTGCGTGAAGGTGTTCTAACCGCCTATGTGTATGCCTTGGACTC
AATATTTGAGGTTCTGACAGGTATTGGAGTTCTGGGCCTTTTAGCCACTG
CATTCGTTGCGGCAAAAACTATGAACAAGCCGATTGAGTCTGACCATGTT
TTACACGACACTTGTGACTCGGCCAAGAATTGAAGTATTGCCAAGGACTT
GAACGGTGATGCCACCAGCACTTTTTGGGTGGGCAGCGCATACTTGGTGC
CTAGTGCAGGGTTTCAGCCCATTATGGCTTCTTTTTCCGACGTTTATGGG
AGAAGAAGAGTACTGGCCATGGCATTGGCCCTCTTCGTGATTGGCTCAAT
TGTGGGATGTCTCGCCCATAATATGGCTACACTTCTCGCCGGGCGTGTCA
TTCAAGGAATCGGAGGAGGCGGACTCATTCCGCTTGCGACGATTATAATT
ACAGATGTAGTGCCTCTACGTCCCAGGCCAAAATACGCTGCCTTGGTTCA
GGCATCCATGGCACTCGGTACTATCCTTGGGCCTCTAATAGGCGGTGCCT
TTTTGGAACATACCAGTAGCTCAACGGGCTGGCGCTGGGTGTTTTACATC
AACTTCCCCCTATCCACCGCTGCCGGAATTTTGCTTTTCTTTTCGGTCAG
GTTCAAAAGGGGCGGGGCTCAGCTTCGTGCCGTTGATTGGTTTGGCCAAG
CTTTGTTCCTGGCCAGTATCTCCATATTCCTGATCGGCCTCTCGTGGGGT
GGAGTGCAGTACACATGGGAAAGCTATCACACTTTGGTTCCATTGTGTCT
TGGGGTTGGAGGTATTGTCGCGACGGTGTGTTGGGAAATCCTGGGGACTG
AGCATCCTTTTGTGAGGATTTCTGTGCTTCAAGATCGATCTGCTTTGGCT
GTGTATGCGGGGTCTATTGTCCAAGGAATTCTAATGACCCTTGATGCTGA
AGTCCAGATAGATCGCAAGGTTAAAAAATATGGGGGACACGTTAGCAAGG
GAGATGTCGAATCCACTGAGACTACTGGACCAGATAACCTGGAATCGGAT
TGGAAACCGACTAAAGAGATGTATGGCGAGCTTTATTATATTTCTGTGTA
TCTGCAGGCTGTGAAAAGCATGTCCGCGGTCATGACTGGTGTTGGCCTCC
TCCCAGTATCGGTTGCGCTCATGCCCACAAGTATAGTCGTGGCTATTTTC
ATTTCGAAAACTGGACGCTACCGCTGGGCGCTATGGTTTGGTTGGGCCGC
TACCATTGCAGCAACGGGTGTGACCATTATTCTGGACAGTGATACCAACA
CAGCCAGCTGGATCTTCATTTTTGCCTTCGTTGGTTTTGGGCATGGAGTG
CTATTCAATGCGCTTTTAATCTCAGCACAAGCCTCGTGTGCAGCAGCCGA
CGCAGCATATGCAGCTTCGATGTATACCTTCTTCCGCACGCTAGGCTTTG
CTATTGGAGTGATAATCGGCTCTACTGTCTTACAGAACTTCATGTCCATG
AAACTCCACGAATTGGACCTTCCGACTGCGATCGCTCAAAATGCGGAAGG
CTTCATTGAAACTCTTAAAACACTAGCCAGCGGGTCAGCTCTGCGTGAAG
GTGTTCTAACCGCCTATGTGTATGCCTTGGACTCAATATTTGAGGTTCTG
ACAGGTATTGGAGTTCTGGGCCTTTTAGCCACTGCATTCGTTGCGGCAAA
AACTATGAACAAGCCGATTGAGTCTGACCATGTTTTACACGACACTTGTG
ACTCGGCCAAGAATTGAAGTATTGCCAAGGACTTGAACGGTGATGCCACC
AGCACTTTTTGGGTGGGCAGCGCATACTTGGTGCCTAGTGCAGGGTTTCA
GCCCATTATGGCTTCTTTTTCCGACGTTTATGGGAGAAGAAGAGTACTGG
CCATGGCATTGGCCCTCTTCGTGATTGGCTCAATTGTGGGATGTCTCGCC
CATAATATGGCTACACTTCTCGCCGGGCGTGTCATTCAAGGAATCGGAGG
AGGCGGACTCATTCCGCTTGCGACGATTATAATTACAGATGTAGTGCCTC
TACGTCCCAGGCCAAAATACGCTGCCTTGGTTCAGGCATCCATGGCACTC
GGTACTATCCTTGGGCCTCTAATAGGCGGTGCCTTTTTGGAACATACCAG
TAGCTCAACGGGCTGGCGCTGGGTGTTTTACATCAACTTCCCCCTATCCA
CCGCTGCCGGAATTTTGCTTTTCTTTTCGGTCAGGTTCAAAAGGGGCGGG
GCTCAGCTTCGTGCCGTTGATTGGTTTGGCCAAGCTTTGTTCCTGGCCAG
TATCTCCATATTCCTGATCGGCCTCTCGTGGGGTGGAGTGCAGTACACAT
GGGAAAGCTATCACACTTTGGTTCCATTGTGTCTTGGGGTTGGAGGTATT
GTCGCGACGGTGTGTTGGGAAATCCTGGGGACTGAGCATCCTTTTGTGAG
GATTTCTGTGCTTCAAGATCGATCTGCTTTGGCTGTGTATGCGGGGTCTA
TTGTCCAAGGAATTCTAATGACCCTTGATGCTGAAGTCCAGATAGATCGC
AAGGTTAAAAAATATGGGGGACACGTTAGCAAGGGAGATGTCGAATCCAC
TGAGACTACTGGACCAGATAACCTGGAATCGGATTGGAAACCGACTAAAG
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.5 |
| Note | SMCOG1005: EmrB/QacA |
| Note | SMCOG1005:Drug resistance transporter |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:402758..404560 - |
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