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KJC3_007912-T1, KJC3_007912-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007912-T1
Unique NameKJC3_007912-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:434039..435658-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007912-T1 ID=KJC3_007912-T1|Name=KJC3_007912-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1620bp|location=Sequence derived from alignment at ch6:434039..435658- (Aspergillus niger KJC3)
ATCGGAACACGATCTCTCAAACTATCATAAACTTTTAGCTTTTTCTATTC
TTCAATTCAATATGCCTACCATCGGCCAAGTTTACCAGCTTTCCAAGACT
GAAGAAGATACTTCAACGATTGGTACTGCGTACGGAGATATCAGGTATAT
TCAAGATATTCTTTCATATATCCTTAGGGGACTAGCTGTAATTTGGGAAC
AGCCATGACGATTGAATCCCTGCCTTCTTATTGCATCACAACTAGTCAAG
CCATACTAACCTCTACAGCATTCTCGGCCAGAAGGTCCGCAAGACCCAGT
TTGCCAATCCTTTGAATCAAGCCATCCTTTTTCTCCATCCACACTTGACC
CAAACCTACAACCCACTCAAAGGCCGAACTCTGAGCACCAATGGCCCTAT
CCGCGCTGGAGAGCTCCTCATGGCCGACCTCCCCTATGCCGTGCTGCCAA
CCGTGGCCGTTGGGGGTGGCGACGACTCCATTTGCAGCAACCTGGGCTGC
AGTCGACGCGTTTCCCGGCATGCAGCAAATAGCGTTACATGCGAGACTGG
TTGCTCTCTCGATATCTGGTGGTGTAACGAGTCCTGCAAAGATGAAGACC
AGGCCCGTCACGACGTCGAGTGCGCCTGGCTGAAGAAGTACAGCCCCGTT
CTCCGCCAGGAACTCGGCGATCACGATTATTACATGCTTTGGATCATCAT
CCGACTCCTTGCAGCCCGGTACCTCGAGCTCCAAGGCACAACGCCAACCA
ACGTTCACCAGCAACTCACATTCCAAGATCGCTTCGTTAGCGGCTGGAAA
GGCGTCCAGCTCCTCCGAAGCAACCGTGACTCCTGGCCTACATCTCAGCT
TCAACACTGGTCCGCTCTAGCCGAAAAATATTTGCTACAATCTTCGCTCC
TCCCGGAAACCCTCGACCTCGATACCCTCGTCGACCTGATCTGCGCCGAG
GAAACCAACGTTTTCGAACTTTGCCCCGGCCCGACGGAGATCATCCCACA
CCAATCTCCGGGCGTCGAGCGCGGCACGCAGTACGGCCTAGCTGTGTTTC
TGCGCATCACGCTCGCAAATCACTCTTGCGCGCCCAATGTAAGTACACAT
CCCACTTCCCGCCCAACTGCGTGTCCCCAAGTTGACCTGTCGCTCACTAA
CTCAACCCACCACGTAGGTGACACACCAAGCCGACGACCGTGGTCGAATG
ATGGTGACTGCACTGCGGGACATCGCGCCAGGCGAGGAGTGTTGTACCTC
CTACTTCGACCTGTCTGAATACGTTGACCTGCAGGCACGTCGAAAGAAAA
CTCAGGAGTTGTTCACATTCACGTGTACGTGCCCGAGGTGTTTGCAGGAG
GAACGGGCCCAGAATTAGTATGTGATGGATGTTATTGGAGGAAGAAAAGT
CCTCATGCAGGTGGGATACGTTTTGTGATACGTCGTTTTTGCGGGCTTAA
TTTTGGCTTGGCTCTGATTTGCCCAGTGGCGCTACTCCGTAGAACATGTG
TGGCCCGTGCTTGTGCGGGATTTGAGACATCATGTTTTAGCAGATTGCTC
GTTGTACCTCGTTGCCTCTGGTATATTGAACTAGTAGCACCTAGAAATAT
ATTACGGGGAAGAGTGGTCA
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Coding sequence (CDS) from alignment at ch6:434039..435658-

>KJC3_007912-T1 ID=KJC3_007912-T1|Name=KJC3_007912-T1|organism=Aspergillus niger KJC3|type=CDS|length=3312bp|location=Sequence derived from alignment at ch6:434039..435658- (Aspergillus niger KJC3)
GTGACACACCAAGCCGACGACCGTGGTCGAATGATGGTGACTGCACTGCG
GGACATCGCGCCAGGCGAGGAGTGTTGTACCTCCTACTTCGACCTGTCTG
AATACGTTGACCTGCAGGCACGTCGAAAGAAAACTCAGGAGTTGTTCACA
TTCACGTGTACGTGCCCGAGGTGTTTGCAGGAGGAACGGGCCCAGAATTA
GCATTCTCGGCCAGAAGGTCCGCAAGACCCAGTTTGCCAATCCTTTGAAT
CAAGCCATCCTTTTTCTCCATCCACACTTGACCCAAACCTACAACCCACT
CAAAGGCCGAACTCTGAGCACCAATGGCCCTATCCGCGCTGGAGAGCTCC
TCATGGCCGACCTCCCCTATGCCGTGCTGCCAACCGTGGCCGTTGGGGGT
GGCGACGACTCCATTTGCAGCAACCTGGGCTGCAGTCGACGCGTTTCCCG
GCATGCAGCAAATAGCGTTACATGCGAGACTGGTTGCTCTCTCGATATCT
GGTGGTGTAACGAGTCCTGCAAAGATGAAGACCAGGCCCGTCACGACGTC
GAGTGCGCCTGGCTGAAGAAGTACAGCCCCGTTCTCCGCCAGGAACTCGG
CGATCACGATTATTACATGCTTTGGATCATCATCCGACTCCTTGCAGCCC
GGTACCTCGAGCTCCAAGGCACAACGCCAACCAACGTTCACCAGCAACTC
ACATTCCAAGATCGCTTCGTTAGCGGCTGGAAAGGCGTCCAGCTCCTCCG
AAGCAACCGTGACTCCTGGCCTACATCTCAGCTTCAACACTGGTCCGCTC
TAGCCGAAAAATATTTGCTACAATCTTCGCTCCTCCCGGAAACCCTCGAC
CTCGATACCCTCGTCGACCTGATCTGCGCCGAGGAAACCAACGTTTTCGA
ACTTTGCCCCGGCCCGACGGAGATCATCCCACACCAATCTCCGGGCGTCG
AGCGCGGCACGCAGTACGGCCTAGCTGTGTTTCTGCGCATCACGCTCGCA
AATCACTCTTGCGCGCCCAATATGCCTACCATCGGCCAAGTTTACCAGCT
TTCCAAGACTGAAGAAGATACTTCAACGATTGGTACTGCGTACGGAGATA
TCAGGTGACACACCAAGCCGACGACCGTGGTCGAATGATGGTGACTGCAC
TGCGGGACATCGCGCCAGGCGAGGAGTGTTGTACCTCCTACTTCGACCTG
TCTGAATACGTTGACCTGCAGGCACGTCGAAAGAAAACTCAGGAGTTGTT
CACATTCACGTGTACGTGCCCGAGGTGTTTGCAGGAGGAACGGGCCCAGA
ATTAGCATTCTCGGCCAGAAGGTCCGCAAGACCCAGTTTGCCAATCCTTT
GAATCAAGCCATCCTTTTTCTCCATCCACACTTGACCCAAACCTACAACC
CACTCAAAGGCCGAACTCTGAGCACCAATGGCCCTATCCGCGCTGGAGAG
CTCCTCATGGCCGACCTCCCCTATGCCGTGCTGCCAACCGTGGCCGTTGG
GGGTGGCGACGACTCCATTTGCAGCAACCTGGGCTGCAGTCGACGCGTTT
CCCGGCATGCAGCAAATAGCGTTACATGCGAGACTGGTTGCTCTCTCGAT
ATCTGGTGGTGTAACGAGTCCTGCAAAGATGAAGACCAGGCCCGTCACGA
CGTCGAGTGCGCCTGGCTGAAGAAGTACAGCCCCGTTCTCCGCCAGGAAC
TCGGCGATCACGATTATTACATGCTTTGGATCATCATCCGACTCCTTGCA
GCCCGGTACCTCGAGCTCCAAGGCACAACGCCAACCAACGTTCACCAGCA
ACTCACATTCCAAGATCGCTTCGTTAGCGGCTGGAAAGGCGTCCAGCTCC
TCCGAAGCAACCGTGACTCCTGGCCTACATCTCAGCTTCAACACTGGTCC
GCTCTAGCCGAAAAATATTTGCTACAATCTTCGCTCCTCCCGGAAACCCT
CGACCTCGATACCCTCGTCGACCTGATCTGCGCCGAGGAAACCAACGTTT
TCGAACTTTGCCCCGGCCCGACGGAGATCATCCCACACCAATCTCCGGGC
GTCGAGCGCGGCACGCAGTACGGCCTAGCTGTGTTTCTGCGCATCACGCT
CGCAAATCACTCTTGCGCGCCCAATATGCCTACCATCGGCCAAGTTTACC
AGCTTTCCAAGACTGAAGAAGATACTTCAACGATTGGTACTGCGTACGGA
GATATCAGGTGACACACCAAGCCGACGACCGTGGTCGAATGATGGTGACT
GCACTGCGGGACATCGCGCCAGGCGAGGAGTGTTGTACCTCCTACTTCGA
CCTGTCTGAATACGTTGACCTGCAGGCACGTCGAAAGAAAACTCAGGAGT
TGTTCACATTCACGTGTACGTGCCCGAGGTGTTTGCAGGAGGAACGGGCC
CAGAATTAGCATTCTCGGCCAGAAGGTCCGCAAGACCCAGTTTGCCAATC
CTTTGAATCAAGCCATCCTTTTTCTCCATCCACACTTGACCCAAACCTAC
AACCCACTCAAAGGCCGAACTCTGAGCACCAATGGCCCTATCCGCGCTGG
AGAGCTCCTCATGGCCGACCTCCCCTATGCCGTGCTGCCAACCGTGGCCG
TTGGGGGTGGCGACGACTCCATTTGCAGCAACCTGGGCTGCAGTCGACGC
GTTTCCCGGCATGCAGCAAATAGCGTTACATGCGAGACTGGTTGCTCTCT
CGATATCTGGTGGTGTAACGAGTCCTGCAAAGATGAAGACCAGGCCCGTC
ACGACGTCGAGTGCGCCTGGCTGAAGAAGTACAGCCCCGTTCTCCGCCAG
GAACTCGGCGATCACGATTATTACATGCTTTGGATCATCATCCGACTCCT
TGCAGCCCGGTACCTCGAGCTCCAAGGCACAACGCCAACCAACGTTCACC
AGCAACTCACATTCCAAGATCGCTTCGTTAGCGGCTGGAAAGGCGTCCAG
CTCCTCCGAAGCAACCGTGACTCCTGGCCTACATCTCAGCTTCAACACTG
GTCCGCTCTAGCCGAAAAATATTTGCTACAATCTTCGCTCCTCCCGGAAA
CCCTCGACCTCGATACCCTCGTCGACCTGATCTGCGCCGAGGAAACCAAC
GTTTTCGAACTTTGCCCCGGCCCGACGGAGATCATCCCACACCAATCTCC
GGGCGTCGAGCGCGGCACGCAGTACGGCCTAGCTGTGTTTCTGCGCATCA
CGCTCGCAAATCACTCTTGCGCGCCCAATATGCCTACCATCGGCCAAGTT
TACCAGCTTTCCAAGACTGAAGAAGATACTTCAACGATTGGTACTGCGTA
CGGAGATATCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007912KJC3_007912Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007912-T1KJC3_007912-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007912-T1.cdsKJC3_007912-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007912-T1.utr3p1KJC3_007912-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007912-T1.exon3KJC3_007912-T1.exon3Aspergillus niger KJC3exon
KJC3_007912-T1.exon2KJC3_007912-T1.exon2Aspergillus niger KJC3exon
KJC3_007912-T1.exon1KJC3_007912-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007912-T1.utr5p1KJC3_007912-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_6.5
DBxrefInterPro:IPR001214
DBxrefPFAM:PF00856
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:434039..435658 -
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