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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:448493..449500+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007918-T1 ID=KJC3_007918-T1|Name=KJC3_007918-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1008bp|location=Sequence derived from alignment at ch6:448493..449500+ (Aspergillus niger KJC3)
AAACATCGTGCTTGGATATCATTGAAGCTTGGAGTGCCGCGCAAGTGCTC
TGATAACAGTGGTAGACATAGATCTCAATTTTCGCCCCTGTCAATCGCTT
TGGGGGCGTAATACTTACCTGCAATATTTTGCCAGAGTCAGAGATGTTGT
CAATGGGAGCTAGGAGAAAGGCGCCTTTGAAGACACACCCTGAGAGGTTA
CCCTACTTCGCGAATGGGAGATAAAAGGATGCATTCTCCCCAAGACTGAA
ATCAATTATCAACAGCAACAATAACGAGAACAAGCAATCATTCGCATTCA
TCTCTCATCCAAACTCTCCAAAACAACAGTGTACATCCTCTCTACTTCAA
CAAAAATGCAGTTTCCTCCTTCGCTCATCGCAACTGCTGCTCTCCTACTC
ACAGCTGCCCCCCAGCTAGCATCAGCCCTCTGGGAATGCGACAGCGGACT
CAGTGACCTAGGAGTTGAGCCCGCCGATGGCACTTTCTGGGTTCACTACA
CCTCCGTCCGCGATAGCAACTACCAGCCTAATGGTGAAGGTTCCGTTGAG
CCATGGGTAAGTTCTCACTATTGCCCTTAAAACGCTTCGTGTGACAAAGG
AATCTAACAGCTCTACTCGGACAGATCCGCGTCTGCAACTCCAAGGACGG
ATCTTGGGAATCCGCCAAGTTTGCAGTGGTCTGCACCAATTTCGAGGGCG
GGAGTTCACAACAGACATTCGATGCCTCCAGCATTGGTCTTACTCAAGAT
ATTGCCGTTTACAACGGTGAAGGATGTGATTATGAGGCCAGTGACCTGAA
GGGCGGGTACATCAAGTACGGCACCACTACCAAGTCTTTGCAGGATGGTT
GTGGTGAGAGGGACCATGGAGTTACTTGCGAGTTCACCTATTAAGGAGGC
CAGATAAGTGAATTGGAATTTGATGTATGGGGTTGGGAATCATGTACTAT
AGACTATTAATCCAGACCTCAAAATGGATTAGAGATCAAGAATTTGATCA
AATTGCAC back to topCoding sequence (CDS) from alignment at ch6:448493..449500+ >KJC3_007918-T1 ID=KJC3_007918-T1|Name=KJC3_007918-T1|organism=Aspergillus niger KJC3|type=CDS|length=942bp|location=Sequence derived from alignment at ch6:448493..449500+ (Aspergillus niger KJC3)
ATGCAGTTTCCTCCTTCGCTCATCGCAACTGCTGCTCTCCTACTCACAGC
TGCCCCCCAGCTAGCATCAGCCCTCTGGGAATGCGACAGCGGACTCAGTG
ACCTAGGAGTTGAGCCCGCCGATGGCACTTTCTGGGTTCACTACACCTCC
GTCCGCGATAGCAACTACCAGCCTAATGGTGAAGGTTCCGTTGAGCCATG
GATCCGCGTCTGCAACTCCAAGGACGGATCTTGGGAATCCGCCAAGTTTG
CAGTGGTCTGCACCAATTTCGAGGGCGGGAGTTCACAACAGACATTCGAT
GCCTCCAGCATTGGTCTTACTCAAGATATTGCCGTTTACAACGGTGAAGG
ATGTGATTATGAGGCCAGTGACCTGAAGGGCGGGTACATCAAGTACGGCA
CCACTACCAAGTCTTTGCAGGATGGTTGTGGTGAGAGGGACCATGGAGTT
ACTTGCGAGTTCACCTATTAAATGCAGTTTCCTCCTTCGCTCATCGCAAC
TGCTGCTCTCCTACTCACAGCTGCCCCCCAGCTAGCATCAGCCCTCTGGG
AATGCGACAGCGGACTCAGTGACCTAGGAGTTGAGCCCGCCGATGGCACT
TTCTGGGTTCACTACACCTCCGTCCGCGATAGCAACTACCAGCCTAATGG
TGAAGGTTCCGTTGAGCCATGGATCCGCGTCTGCAACTCCAAGGACGGAT
CTTGGGAATCCGCCAAGTTTGCAGTGGTCTGCACCAATTTCGAGGGCGGG
AGTTCACAACAGACATTCGATGCCTCCAGCATTGGTCTTACTCAAGATAT
TGCCGTTTACAACGGTGAAGGATGTGATTATGAGGCCAGTGACCTGAAGG
GCGGGTACATCAAGTACGGCACCACTACCAAGTCTTTGCAGGATGGTTGT
GGTGAGAGGGACCATGGAGTTACTTGCGAGTTCACCTATTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007918-T1.utr5p1 | KJC3_007918-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007918-T1.utr3p1 | KJC3_007918-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-24) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:448493..449500 + |
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