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KJC3_007921-T1, KJC3_007921-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007921-T1
Unique NameKJC3_007921-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:454083..454982+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007921-T1 ID=KJC3_007921-T1|Name=KJC3_007921-T1|organism=Aspergillus niger KJC3|type=mRNA|length=900bp|location=Sequence derived from alignment at ch6:454083..454982+ (Aspergillus niger KJC3)
ATGATTTTCCACTCGACCCTCATGTCAGTATAACCCTCGCTGATCGGCCA
TTGTATTAGCTCATGCCAGCCAGGATCGACGACATTGAGGATGACTCAAT
GCTCCGTCGTGGGAAGCTAGCCGTATATGTAGTGTTTGGTAAAGCTCAGA
CTGTCAATAGCGCAACCTATTTATACGCGAAAGCGACTCGTGACCTAGAC
CAGCTACAACAGGACGCGTGCAAAGCAGCCTTTCTCGGTCAGTAACCAAG
AAAGCCTACTTCAAACCCTTTCTAAACGTTTGCAGACGAACTGGAGACGC
TTGCCCTTGGGCAAGCTCTTGATCTTCACTGGAAATTTCAGAAGACGTGT
CCGACAACGGGCGAATATCTTACTATGGTCGATAACAAAACTGGGGGGCT
CTTCAGGATGACACTACGCCTTCTGGAGATTGAGTCGAAGGCGGAGCCGT
GCCCTGATCTTATGCAACTCATAACGCTGATGGGAAGATACTACCAAATC
CGAGATGACTACTTGAATCTGACGTCAGATGAGGTATGTACCTAGTAGGA
TACATTGAGTGAAAGACAGTTCTGACATGACATAGTATACCGGAACAAAA
GGTTACTGCGAGGATCTCTCGGAGGGCAAATTGTCCTTCCCTCTTATCCA
TGCTTTGCAAAACAGTCCCGAGGCGGATATGCTGCGGGGGCTGTTGTTCC
ATCGAGAGAATGGCCATGAGCTGTCGCTAGATATGAAGAGCTATATTGTC
GCTGAGATGAGAAAGGTCGGTAGTCTTGCACATGCTCGAGAAACTGCATT
GCAGCTGTTCGATGCAATGATGGGTACGTTGGAACGAGTTGAGGCTACCC
TTGGTCCCAATAAAAGATTGAAGGCCTTATTGCTATGGTTAAAGCTGTGA
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Coding sequence (CDS) from alignment at ch6:454083..454982+

>KJC3_007921-T1 ID=KJC3_007921-T1|Name=KJC3_007921-T1|organism=Aspergillus niger KJC3|type=CDS|length=3000bp|location=Sequence derived from alignment at ch6:454083..454982+ (Aspergillus niger KJC3)
ATGATTTTCCACTCGACCCTCATGATCGACGACATTGAGGATGACTCAAT
GCTCCGTCGTGGGAAGCTAGCCGTATATGTAGTGTTTGGTAAAGCTCAGA
CTGTCAATAGCGCAACCTATTTATACGCGAAAGCGACTCGTGACCTAGAC
CAGCTACAACAGGACGCGTGCAAAGCAGCCTTTCTCGACGAACTGGAGAC
GCTTGCCCTTGGGCAAGCTCTTGATCTTCACTGGAAATTTCAGAAGACGT
GTCCGACAACGGGCGAATATCTTACTATGGTCGATAACAAAACTGGGGGG
CTCTTCAGGATGACACTACGCCTTCTGGAGATTGAGTCGAAGGCGGAGCC
GTGCCCTGATCTTATGCAACTCATAACGCTGATGGGAAGATACTACCAAA
TCCGAGATGACTACTTGAATCTGACGTCAGATGAGTATACCGGAACAAAA
GGTTACTGCGAGGATCTCTCGGAGGGCAAATTGTCCTTCCCTCTTATCCA
TGCTTTGCAAAACAGTCCCGAGGCGGATATGCTGCGGGGGCTGTTGTTCC
ATCGAGAGAATGGCCATGAGCTGTCGCTAGATATGAAGAGCTATATTGTC
GCTGAGATGAGAAAGGTCGGTAGTCTTGCACATGCTCGAGAAACTGCATT
GCAGCTGTTCGATGCAATGATGGGTACGTTGGAACGAGTTGAGGCTACCC
TTGGTCCCAATAAAAGATTGAAGGCCTTATTGCTATGGTTAAAGCTGTGA
ATGATTTTCCACTCGACCCTCATGATCGACGACATTGAGGATGACTCAAT
GCTCCGTCGTGGGAAGCTAGCCGTATATGTAGTGTTTGGTAAAGCTCAGA
CTGTCAATAGCGCAACCTATTTATACGCGAAAGCGACTCGTGACCTAGAC
CAGCTACAACAGGACGCGTGCAAAGCAGCCTTTCTCGACGAACTGGAGAC
GCTTGCCCTTGGGCAAGCTCTTGATCTTCACTGGAAATTTCAGAAGACGT
GTCCGACAACGGGCGAATATCTTACTATGGTCGATAACAAAACTGGGGGG
CTCTTCAGGATGACACTACGCCTTCTGGAGATTGAGTCGAAGGCGGAGCC
GTGCCCTGATCTTATGCAACTCATAACGCTGATGGGAAGATACTACCAAA
TCCGAGATGACTACTTGAATCTGACGTCAGATGAGTATACCGGAACAAAA
GGTTACTGCGAGGATCTCTCGGAGGGCAAATTGTCCTTCCCTCTTATCCA
TGCTTTGCAAAACAGTCCCGAGGCGGATATGCTGCGGGGGCTGTTGTTCC
ATCGAGAGAATGGCCATGAGCTGTCGCTAGATATGAAGAGCTATATTGTC
GCTGAGATGAGAAAGGTCGGTAGTCTTGCACATGCTCGAGAAACTGCATT
GCAGCTGTTCGATGCAATGATGGGTACGTTGGAACGAGTTGAGGCTACCC
TTGGTCCCAATAAAAGATTGAAGGCCTTATTGCTATGGTTAAAGCTGTGA
ATGATTTTCCACTCGACCCTCATGATCGACGACATTGAGGATGACTCAAT
GCTCCGTCGTGGGAAGCTAGCCGTATATGTAGTGTTTGGTAAAGCTCAGA
CTGTCAATAGCGCAACCTATTTATACGCGAAAGCGACTCGTGACCTAGAC
CAGCTACAACAGGACGCGTGCAAAGCAGCCTTTCTCGACGAACTGGAGAC
GCTTGCCCTTGGGCAAGCTCTTGATCTTCACTGGAAATTTCAGAAGACGT
GTCCGACAACGGGCGAATATCTTACTATGGTCGATAACAAAACTGGGGGG
CTCTTCAGGATGACACTACGCCTTCTGGAGATTGAGTCGAAGGCGGAGCC
GTGCCCTGATCTTATGCAACTCATAACGCTGATGGGAAGATACTACCAAA
TCCGAGATGACTACTTGAATCTGACGTCAGATGAGTATACCGGAACAAAA
GGTTACTGCGAGGATCTCTCGGAGGGCAAATTGTCCTTCCCTCTTATCCA
TGCTTTGCAAAACAGTCCCGAGGCGGATATGCTGCGGGGGCTGTTGTTCC
ATCGAGAGAATGGCCATGAGCTGTCGCTAGATATGAAGAGCTATATTGTC
GCTGAGATGAGAAAGGTCGGTAGTCTTGCACATGCTCGAGAAACTGCATT
GCAGCTGTTCGATGCAATGATGGGTACGTTGGAACGAGTTGAGGCTACCC
TTGGTCCCAATAAAAGATTGAAGGCCTTATTGCTATGGTTAAAGCTGTGA
ATGATTTTCCACTCGACCCTCATGATCGACGACATTGAGGATGACTCAAT
GCTCCGTCGTGGGAAGCTAGCCGTATATGTAGTGTTTGGTAAAGCTCAGA
CTGTCAATAGCGCAACCTATTTATACGCGAAAGCGACTCGTGACCTAGAC
CAGCTACAACAGGACGCGTGCAAAGCAGCCTTTCTCGACGAACTGGAGAC
GCTTGCCCTTGGGCAAGCTCTTGATCTTCACTGGAAATTTCAGAAGACGT
GTCCGACAACGGGCGAATATCTTACTATGGTCGATAACAAAACTGGGGGG
CTCTTCAGGATGACACTACGCCTTCTGGAGATTGAGTCGAAGGCGGAGCC
GTGCCCTGATCTTATGCAACTCATAACGCTGATGGGAAGATACTACCAAA
TCCGAGATGACTACTTGAATCTGACGTCAGATGAGTATACCGGAACAAAA
GGTTACTGCGAGGATCTCTCGGAGGGCAAATTGTCCTTCCCTCTTATCCA
TGCTTTGCAAAACAGTCCCGAGGCGGATATGCTGCGGGGGCTGTTGTTCC
ATCGAGAGAATGGCCATGAGCTGTCGCTAGATATGAAGAGCTATATTGTC
GCTGAGATGAGAAAGGTCGGTAGTCTTGCACATGCTCGAGAAACTGCATT
GCAGCTGTTCGATGCAATGATGGGTACGTTGGAACGAGTTGAGGCTACCC
TTGGTCCCAATAAAAGATTGAAGGCCTTATTGCTATGGTTAAAGCTGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007921KJC3_007921Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007921-T1.exon1KJC3_007921-T1.exon1Aspergillus niger KJC3exon
KJC3_007921-T1.exon2KJC3_007921-T1.exon2Aspergillus niger KJC3exon
KJC3_007921-T1.exon3KJC3_007921-T1.exon3Aspergillus niger KJC3exon
KJC3_007921-T1.exon4KJC3_007921-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007921-T1.cdsKJC3_007921-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007921-T1KJC3_007921-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR033749
DBxrefInterPro:IPR000092
DBxrefInterPro:IPR008949
DBxrefPFAM:PF00348
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:454083..454982 +
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