You are here

Home

KJC3_007922-T1, KJC3_007922-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007922-T1
Unique NameKJC3_007922-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:455323..456565-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007922-T1 ID=KJC3_007922-T1|Name=KJC3_007922-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1243bp|location=Sequence derived from alignment at ch6:455323..456565- (Aspergillus niger KJC3)
CTTTCTCGGCTTCTCTAAGTGGACATATGCGTCGCAGGGAACGCCGAAGC
AGCAGCGATGTCAACCATGTCGAACGAGAAACTCCCGACATACTTTATCG
GCCATGGTGGGAGTCTCATGTCTTGAATTTGTACAGCAAGTTTACTAAAC
ATTAGCAGGAGGAGTGAGCATCCTCTTCAAACCCGGCTACGGGCCCGTCC
AACAAGACCTCCGCGAGATCGGCAAGGAAATCAAGGCCCTGAAACCGGAA
GCAATTGTCATCACCTGCGGCCATTTTCAAGGCGAAGGTGATGCTATTGA
AGGTAAACGATTTAAAAAGTAGGACCCACTACTGGAACTCTCTAAAACAT
TATGCCACAGTGAACCTAAAAGAACCCACCAAAGTGTGGCATGACTTGGG
CCCTTCCTGGCACACGACATTCCCCCACGTCTTCGAGTATCAGTACGCAC
ACAAATCGTCTAGAGCCTTAGGAGAGAAGGTATTGCAGCATCTTCTTGAT
CAGGGGATTAAAGCGAGGGGAGTGGAGCGTGATCTTGATCATGGAATGTC
AGTTCTTCCCCTGCGCTTTTGAGAAGCCGAGACAATCTCGATCTACCTAG
ACAAGTGGCCTAATCGAAACCAGATGGGTGCCTTTCAAACTCATGTTTCC
AGAAGGAGAAGACGAACTGGATATTCCCATCCTGCAGATTTCCACCTACG
CAGGAAATGATCTGAATGCACACGTTCGGCTGGGTGAAGCACTTGCGTCA
TTGTATGTTTTCACATTCAACTCATGCATTCAGCATTGAAATTTCCGTAT
GCTGAAAGAAAAGCTGATCGATCGTCAGACCCGGGCGCATTCTCCTCATT
GGATCAGGCATGATCGTCCACAACCTCCGAGCTACGCGTGAAGGAACAAC
AGACACAACAGTAGCTAGATCAATAGAAGATGCGGCTCTGAAGGCCTTAT
CTGCCCCGACCCCCAGCGAAAGAGACGCACAGTTTCTAGCCTTCCAAGAA
CGTGAGGATTGGATATTGACGCTCATCCGACCGAGGAACATGTCCTGCCA
TTATACATGACACTGGGTGTCGGGCGCAATTGGTCGGAATATAAGGTCTG
GAATCAGGATCGGTATATTGTAGGACAGTCGTATCTGTCGTTTCGTCTTG
GAAAGCTGCCTTTGACAGGTGATCGCTTGAATGGGCATCTTTAATGGTTA
ATGCTCTAAATAATGCCCTCGGACGGCAGGTGATCTTGAATAA
back to top

Coding sequence (CDS) from alignment at ch6:455323..456565-

>KJC3_007922-T1 ID=KJC3_007922-T1|Name=KJC3_007922-T1|organism=Aspergillus niger KJC3|type=CDS|length=3705bp|location=Sequence derived from alignment at ch6:455323..456565- (Aspergillus niger KJC3)
ACCCGGGCGCATTCTCCTCATTGGATCAGGCATGATCGTCCACAACCTCC
GAGCTACGCGTGAAGGAACAACAGACACAACAGTAGCTAGATCAATAGAA
GATGCGGCTCTGAAGGCCTTATCTGCCCCGACCCCCAGCGAAAGAGACGC
ACAGTTTCTAGCCTTCCAAGAACGTGAGGATTGGATATTGACGCTCATCC
GACCGAGGAACATGTCCTGCCATTATACATGAATGGGTGCCTTTCAAACT
CATGTTTCCAGAAGGAGAAGACGAACTGGATATTCCCATCCTGCAGATTT
CCACCTACGCAGGAAATGATCTGAATGCACACGTTCGGCTGGGTGAAGCA
CTTGCGTCATTTGAACCTAAAAGAACCCACCAAAGTGTGGCATGACTTGG
GCCCTTCCTGGCACACGACATTCCCCCACGTCTTCGAGTATCAGTACGCA
CACAAATCGTCTAGAGCCTTAGGAGAGAAGGTATTGCAGCATCTTCTTGA
TCAGGGGATTAAAGCGAGGGGAGTGGAGCGTGATCTTGATCATGGAATGA
GGAGTGAGCATCCTCTTCAAACCCGGCTACGGGCCCGTCCAACAAGACCT
CCGCGAGATCGGCAAGGAAATCAAGGCCCTGAAACCGGAAGCAATTGTCA
TCACCTGCGGCCATTTTCAAGGCGAAGGTGATGCTATTGAAGATGTCAAC
CATGTCGAACGAGAAACTCCCGACATACTTTATCGGCCATGACCCGGGCG
CATTCTCCTCATTGGATCAGGCATGATCGTCCACAACCTCCGAGCTACGC
GTGAAGGAACAACAGACACAACAGTAGCTAGATCAATAGAAGATGCGGCT
CTGAAGGCCTTATCTGCCCCGACCCCCAGCGAAAGAGACGCACAGTTTCT
AGCCTTCCAAGAACGTGAGGATTGGATATTGACGCTCATCCGACCGAGGA
ACATGTCCTGCCATTATACATGAATGGGTGCCTTTCAAACTCATGTTTCC
AGAAGGAGAAGACGAACTGGATATTCCCATCCTGCAGATTTCCACCTACG
CAGGAAATGATCTGAATGCACACGTTCGGCTGGGTGAAGCACTTGCGTCA
TTTGAACCTAAAAGAACCCACCAAAGTGTGGCATGACTTGGGCCCTTCCT
GGCACACGACATTCCCCCACGTCTTCGAGTATCAGTACGCACACAAATCG
TCTAGAGCCTTAGGAGAGAAGGTATTGCAGCATCTTCTTGATCAGGGGAT
TAAAGCGAGGGGAGTGGAGCGTGATCTTGATCATGGAATGAGGAGTGAGC
ATCCTCTTCAAACCCGGCTACGGGCCCGTCCAACAAGACCTCCGCGAGAT
CGGCAAGGAAATCAAGGCCCTGAAACCGGAAGCAATTGTCATCACCTGCG
GCCATTTTCAAGGCGAAGGTGATGCTATTGAAGATGTCAACCATGTCGAA
CGAGAAACTCCCGACATACTTTATCGGCCATGACCCGGGCGCATTCTCCT
CATTGGATCAGGCATGATCGTCCACAACCTCCGAGCTACGCGTGAAGGAA
CAACAGACACAACAGTAGCTAGATCAATAGAAGATGCGGCTCTGAAGGCC
TTATCTGCCCCGACCCCCAGCGAAAGAGACGCACAGTTTCTAGCCTTCCA
AGAACGTGAGGATTGGATATTGACGCTCATCCGACCGAGGAACATGTCCT
GCCATTATACATGAATGGGTGCCTTTCAAACTCATGTTTCCAGAAGGAGA
AGACGAACTGGATATTCCCATCCTGCAGATTTCCACCTACGCAGGAAATG
ATCTGAATGCACACGTTCGGCTGGGTGAAGCACTTGCGTCATTTGAACCT
AAAAGAACCCACCAAAGTGTGGCATGACTTGGGCCCTTCCTGGCACACGA
CATTCCCCCACGTCTTCGAGTATCAGTACGCACACAAATCGTCTAGAGCC
TTAGGAGAGAAGGTATTGCAGCATCTTCTTGATCAGGGGATTAAAGCGAG
GGGAGTGGAGCGTGATCTTGATCATGGAATGAGGAGTGAGCATCCTCTTC
AAACCCGGCTACGGGCCCGTCCAACAAGACCTCCGCGAGATCGGCAAGGA
AATCAAGGCCCTGAAACCGGAAGCAATTGTCATCACCTGCGGCCATTTTC
AAGGCGAAGGTGATGCTATTGAAGATGTCAACCATGTCGAACGAGAAACT
CCCGACATACTTTATCGGCCATGACCCGGGCGCATTCTCCTCATTGGATC
AGGCATGATCGTCCACAACCTCCGAGCTACGCGTGAAGGAACAACAGACA
CAACAGTAGCTAGATCAATAGAAGATGCGGCTCTGAAGGCCTTATCTGCC
CCGACCCCCAGCGAAAGAGACGCACAGTTTCTAGCCTTCCAAGAACGTGA
GGATTGGATATTGACGCTCATCCGACCGAGGAACATGTCCTGCCATTATA
CATGAATGGGTGCCTTTCAAACTCATGTTTCCAGAAGGAGAAGACGAACT
GGATATTCCCATCCTGCAGATTTCCACCTACGCAGGAAATGATCTGAATG
CACACGTTCGGCTGGGTGAAGCACTTGCGTCATTTGAACCTAAAAGAACC
CACCAAAGTGTGGCATGACTTGGGCCCTTCCTGGCACACGACATTCCCCC
ACGTCTTCGAGTATCAGTACGCACACAAATCGTCTAGAGCCTTAGGAGAG
AAGGTATTGCAGCATCTTCTTGATCAGGGGATTAAAGCGAGGGGAGTGGA
GCGTGATCTTGATCATGGAATGAGGAGTGAGCATCCTCTTCAAACCCGGC
TACGGGCCCGTCCAACAAGACCTCCGCGAGATCGGCAAGGAAATCAAGGC
CCTGAAACCGGAAGCAATTGTCATCACCTGCGGCCATTTTCAAGGCGAAG
GTGATGCTATTGAAGATGTCAACCATGTCGAACGAGAAACTCCCGACATA
CTTTATCGGCCATGACCCGGGCGCATTCTCCTCATTGGATCAGGCATGAT
CGTCCACAACCTCCGAGCTACGCGTGAAGGAACAACAGACACAACAGTAG
CTAGATCAATAGAAGATGCGGCTCTGAAGGCCTTATCTGCCCCGACCCCC
AGCGAAAGAGACGCACAGTTTCTAGCCTTCCAAGAACGTGAGGATTGGAT
ATTGACGCTCATCCGACCGAGGAACATGTCCTGCCATTATACATGAATGG
GTGCCTTTCAAACTCATGTTTCCAGAAGGAGAAGACGAACTGGATATTCC
CATCCTGCAGATTTCCACCTACGCAGGAAATGATCTGAATGCACACGTTC
GGCTGGGTGAAGCACTTGCGTCATTTGAACCTAAAAGAACCCACCAAAGT
GTGGCATGACTTGGGCCCTTCCTGGCACACGACATTCCCCCACGTCTTCG
AGTATCAGTACGCACACAAATCGTCTAGAGCCTTAGGAGAGAAGGTATTG
CAGCATCTTCTTGATCAGGGGATTAAAGCGAGGGGAGTGGAGCGTGATCT
TGATCATGGAATGAGGAGTGAGCATCCTCTTCAAACCCGGCTACGGGCCC
GTCCAACAAGACCTCCGCGAGATCGGCAAGGAAATCAAGGCCCTGAAACC
GGAAGCAATTGTCATCACCTGCGGCCATTTTCAAGGCGAAGGTGATGCTA
TTGAAGATGTCAACCATGTCGAACGAGAAACTCCCGACATACTTTATCGG
CCATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008198ferrous iron binding
GO:0016491oxidoreductase activity
GO:0008270zinc ion binding
GO:0016701oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
Vocabulary: Biological Process
TermDefinition
GO:0006725cellular aromatic compound metabolic process
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007922KJC3_007922Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007922-T1KJC3_007922-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007922-T1.cdsKJC3_007922-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007922-T1.utr3p1KJC3_007922-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007922-T1.exon5KJC3_007922-T1.exon5Aspergillus niger KJC3exon
KJC3_007922-T1.exon4KJC3_007922-T1.exon4Aspergillus niger KJC3exon
KJC3_007922-T1.exon3KJC3_007922-T1.exon3Aspergillus niger KJC3exon
KJC3_007922-T1.exon2KJC3_007922-T1.exon2Aspergillus niger KJC3exon
KJC3_007922-T1.exon1KJC3_007922-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007922-T1.utr5p1KJC3_007922-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR004183
DBxrefInterPro:IPR014436
DBxrefPFAM:PF02900
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:455323..456565 -
Powered by Drupal