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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:468514..470424- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007929-T1 ID=KJC3_007929-T1|Name=KJC3_007929-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1911bp|location=Sequence derived from alignment at ch6:468514..470424- (Aspergillus niger KJC3)
ATGGCTGCTTCTGGTCGCGTCTGCGCCCGGTGCGCAGTGATTGTAACTCC
TGACCTCTCATTCGAGGACTGATCACTATACTGACTTCGGATAGAAACAA
CGCTGTGACGGCGCCTCGCCCTGCTCTCGTTGCGCACGTATGCTTTACGC
TTCTACTTCTCTGGGTGGTAATATATGCTGACCAACTAGGTCTGGGCCAC
ATCTGTGAGCCTCAACAGCCCGGAAGACCTGCATCTGAGGTCCCTTCGCT
AGCTTATCGCAGACCTAGGGCTTCCCGATCGCGCGGTGGATGTACCTCCT
GCAAGGCGCGGTAAAGGACACCTATGAGACCCCCAATACTACTGCATTGC
ACCGTCTGACAGCTAATAGAAAGAAGAAGTGTGATGAGAGCCGACCTCGA
TGTAGTGACTGTCGTCGCTTAAACTTACCATGCCACTGGAATAATCCAAG
GGAGCGATCTCCATCGCCAGCCCTCGCCTCTCCGCAGCCGTCGCCTACGT
CTCCCTCTTCCGAACCTGCTCATGGAACTATCCTATCTTCCGTTTCGGAT
CTAGTCCCAGAGCCCGATCCGATATCCCCTTCCGAGAACATATTATCATC
CGTTAGTGATGATCCGCTATCTCCATTCTCGCCTCTTTGGCTCGATGTGG
AGATGATCCTCGGACCCATTCAGTCCCCAGATGGCGCTTTCAACCCCTAT
CTCCACAATGACGACGACCGTAGCCTATTCAATCACTATGTACATATCGT
TTCACGAGCTCTATCACGTTCCACGACTACTGAATCCAACAACCCATTTC
TAGCGACTCTGCTTCCCATGGCCGCCGCATCGGAGACGCTAACCAGCGTC
ATACTGGGCCTTAGTGGCTGCCACTGGCGGCGCATCTATCCTCAAATATG
GGACCGTGCCCTGGCGCGCCAGGGACGAGGTACGTAATTCAACAAGCGAC
ATAGCTTGACTAAACCCTGCTAACCCCAACAGCCTTGGCACAGGTGAGCA
ACCTACTCCGTCGGCCGAACCAAAGTCGCCAATCTTTCCTCGAGGCCTGC
GCCACAATTCTCCTCCTCTGCCTCACAGAGCTATTCGAGGGCACCTCTCG
TGTCTGGAAATGGCATCTCAAAGCCGCAGGAAATCTTCTCAGTACTGCGG
CAGGTACCACAGATCGCCACCGCCTCGCATCAACCCCTGAAGGGACCTTT
TGTCTCCAACTCTTCCACTACCTTGACGCCATGTCCACCATATCGAGATG
TAAACCCCCGTTGTTACGTGCAGGTGAGCGACTTACGGACCTTACCTCAT
CAACTTCCTGCTCTTCCCTCCCAGTACCCCTCGGCGACAATTCTATCTCC
GGGATCCCTCCACCCCTACTAGAATATCTCGGCTGGGTCAACCTCCTCGC
CGCCCACCGCAGCCGACGTGTCGACGACCTCTCCGAAATCGGGTTCCGAA
CAGCCGCTGCGCACGTGCGCGCACAACTTGATACCTGGCGCCTTGAGTAC
GAGGCAACCAGCACTGCTCTGACGAACAGTGATGTGGACAGAGCAACAAC
AGCTTTCGAATGGGCCGTCCGATTACGACTACATCAGATCGTGGACGGAT
ATGATCCGCACCATGCGGACGTCGAGAATGCCCTCTCTCGTATTGTGACG
GCCGTGTTGGCGATCCCTTATGGTAGTCCCGTGGAAGGTACTCTGTTGTT
TCCGTTGGTGATTGCTGGCGCCAGCTGTAGGGATAATATGGAGCGCAGGA
TGGTTGTTAAGGAACGGTTGATGGTGATGGAGAATACGTTGGGGTTTGGG
CATATTTCGCATGCGAGACGGTTGCTAGAGACGGTTTGGGCTGATGAAGG
AGGGGATGGGAATTGGGCGAGAATTAGGTATAGTATGTTTCCGGGGGTGG
TGTTTGTTTAG back to topCoding sequence (CDS) from alignment at ch6:468514..470424- >KJC3_007929-T1 ID=KJC3_007929-T1|Name=KJC3_007929-T1|organism=Aspergillus niger KJC3|type=CDS|length=8385bp|location=Sequence derived from alignment at ch6:468514..470424- (Aspergillus niger KJC3)
CCTTGGCACAGGTGAGCAACCTACTCCGTCGGCCGAACCAAAGTCGCCAA
TCTTTCCTCGAGGCCTGCGCCACAATTCTCCTCCTCTGCCTCACAGAGCT
ATTCGAGGGCACCTCTCGTGTCTGGAAATGGCATCTCAAAGCCGCAGGAA
ATCTTCTCAGTACTGCGGCAGGTACCACAGATCGCCACCGCCTCGCATCA
ACCCCTGAAGGGACCTTTTGTCTCCAACTCTTCCACTACCTTGACGCCAT
GTCCACCATATCGAGATGTAAACCCCCGTTGTTACGTGCAGGTGAGCGAC
TTACGGACCTTACCTCATCAACTTCCTGCTCTTCCCTCCCAGTACCCCTC
GGCGACAATTCTATCTCCGGGATCCCTCCACCCCTACTAGAATATCTCGG
CTGGGTCAACCTCCTCGCCGCCCACCGCAGCCGACGTGTCGACGACCTCT
CCGAAATCGGGTTCCGAACAGCCGCTGCGCACGTGCGCGCACAACTTGAT
ACCTGGCGCCTTGAGTACGAGGCAACCAGCACTGCTCTGACGAACAGTGA
TGTGGACAGAGCAACAACAGCTTTCGAATGGGCCGTCCGATTACGACTAC
ATCAGATCGTGGACGGATATGATCCGCACCATGCGGACGTCGAGAATGCC
CTCTCTCGTATTGTGACGGCCGTGTTGGCGATCCCTTATGGTAGTCCCGT
GGAAGGTACTCTGTTGTTTCCGTTGGTGATTGCTGGCGCCAGCTGTAGGG
ATAATATGGAGCGCAGGATGGTTGTTAAGGAACGGTTGATGGTGATGGAG
AATACGTTGGGGTTTGGGCATATTTCGCATGCGAGACGGTTGCTAGAGAC
GGTTTGGGCTGATGAAGGAGGGGATGGGAATTGGGCGAGAATTAGGTATA
GTATGTTTCCGGGGGTGGTGTTTGTTTAGGGCTTCCCGATCGCGCGGTGG
ATGTACCTCCTGCAAGGCGCGGTAAAGGACACCTATGAGACCCCCAATAC
TACTGCATTGCACCGTCTGACAGCTAATAGAAAGAAGAAGTGTGATGAGA
GCCGACCTCGATGTAGTGACTGTCGTCGCTTAAACTTACCATGCCACTGG
AATAATCCAAGGGAGCGATCTCCATCGCCAGCCCTCGCCTCTCCGCAGCC
GTCGCCTACGTCTCCCTCTTCCGAACCTGCTCATGGAACTATCCTATCTT
CCGTTTCGGATCTAGTCCCAGAGCCCGATCCGATATCCCCTTCCGAGAAC
ATATTATCATCCGTTAGTGATGATCCGCTATCTCCATTCTCGCCTCTTTG
GCTCGATGTGGAGATGATCCTCGGACCCATTCAGTCCCCAGATGGCGCTT
TCAACCCCTATCTCCACAATGACGACGACCGTAGCCTATTCAATCACTAT
GTACATATCGTTTCACGAGCTCTATCACGTTCCACGACTACTGAATCCAA
CAACCCATTTCTAGCGACTCTGCTTCCCATGGCCGCCGCATCGGAGACGC
TAACCAGCGTCATACTGGGCCTTAGTGGCTGCCACTGGCGGCGCATCTAT
CCTCAAATATGGGACCGTGCCCTGGCGCGCCAGGGACGAGGTCTGGGCCA
CATCTAAACAACGCTGTGACGGCGCCTCGCCCTGCTCTCGTTGCGCACAT
GGCTGCTTCTGGTCGCGTCTGCGCCCGCCTTGGCACAGGTGAGCAACCTA
CTCCGTCGGCCGAACCAAAGTCGCCAATCTTTCCTCGAGGCCTGCGCCAC
AATTCTCCTCCTCTGCCTCACAGAGCTATTCGAGGGCACCTCTCGTGTCT
GGAAATGGCATCTCAAAGCCGCAGGAAATCTTCTCAGTACTGCGGCAGGT
ACCACAGATCGCCACCGCCTCGCATCAACCCCTGAAGGGACCTTTTGTCT
CCAACTCTTCCACTACCTTGACGCCATGTCCACCATATCGAGATGTAAAC
CCCCGTTGTTACGTGCAGGTGAGCGACTTACGGACCTTACCTCATCAACT
TCCTGCTCTTCCCTCCCAGTACCCCTCGGCGACAATTCTATCTCCGGGAT
CCCTCCACCCCTACTAGAATATCTCGGCTGGGTCAACCTCCTCGCCGCCC
ACCGCAGCCGACGTGTCGACGACCTCTCCGAAATCGGGTTCCGAACAGCC
GCTGCGCACGTGCGCGCACAACTTGATACCTGGCGCCTTGAGTACGAGGC
AACCAGCACTGCTCTGACGAACAGTGATGTGGACAGAGCAACAACAGCTT
TCGAATGGGCCGTCCGATTACGACTACATCAGATCGTGGACGGATATGAT
CCGCACCATGCGGACGTCGAGAATGCCCTCTCTCGTATTGTGACGGCCGT
GTTGGCGATCCCTTATGGTAGTCCCGTGGAAGGTACTCTGTTGTTTCCGT
TGGTGATTGCTGGCGCCAGCTGTAGGGATAATATGGAGCGCAGGATGGTT
GTTAAGGAACGGTTGATGGTGATGGAGAATACGTTGGGGTTTGGGCATAT
TTCGCATGCGAGACGGTTGCTAGAGACGGTTTGGGCTGATGAAGGAGGGG
ATGGGAATTGGGCGAGAATTAGGTATAGTATGTTTCCGGGGGTGGTGTTT
GTTTAGGGCTTCCCGATCGCGCGGTGGATGTACCTCCTGCAAGGCGCGGT
AAAGGACACCTATGAGACCCCCAATACTACTGCATTGCACCGTCTGACAG
CTAATAGAAAGAAGAAGTGTGATGAGAGCCGACCTCGATGTAGTGACTGT
CGTCGCTTAAACTTACCATGCCACTGGAATAATCCAAGGGAGCGATCTCC
ATCGCCAGCCCTCGCCTCTCCGCAGCCGTCGCCTACGTCTCCCTCTTCCG
AACCTGCTCATGGAACTATCCTATCTTCCGTTTCGGATCTAGTCCCAGAG
CCCGATCCGATATCCCCTTCCGAGAACATATTATCATCCGTTAGTGATGA
TCCGCTATCTCCATTCTCGCCTCTTTGGCTCGATGTGGAGATGATCCTCG
GACCCATTCAGTCCCCAGATGGCGCTTTCAACCCCTATCTCCACAATGAC
GACGACCGTAGCCTATTCAATCACTATGTACATATCGTTTCACGAGCTCT
ATCACGTTCCACGACTACTGAATCCAACAACCCATTTCTAGCGACTCTGC
TTCCCATGGCCGCCGCATCGGAGACGCTAACCAGCGTCATACTGGGCCTT
AGTGGCTGCCACTGGCGGCGCATCTATCCTCAAATATGGGACCGTGCCCT
GGCGCGCCAGGGACGAGGTCTGGGCCACATCTAAACAACGCTGTGACGGC
GCCTCGCCCTGCTCTCGTTGCGCACATGGCTGCTTCTGGTCGCGTCTGCG
CCCGCCTTGGCACAGGTGAGCAACCTACTCCGTCGGCCGAACCAAAGTCG
CCAATCTTTCCTCGAGGCCTGCGCCACAATTCTCCTCCTCTGCCTCACAG
AGCTATTCGAGGGCACCTCTCGTGTCTGGAAATGGCATCTCAAAGCCGCA
GGAAATCTTCTCAGTACTGCGGCAGGTACCACAGATCGCCACCGCCTCGC
ATCAACCCCTGAAGGGACCTTTTGTCTCCAACTCTTCCACTACCTTGACG
CCATGTCCACCATATCGAGATGTAAACCCCCGTTGTTACGTGCAGGTGAG
CGACTTACGGACCTTACCTCATCAACTTCCTGCTCTTCCCTCCCAGTACC
CCTCGGCGACAATTCTATCTCCGGGATCCCTCCACCCCTACTAGAATATC
TCGGCTGGGTCAACCTCCTCGCCGCCCACCGCAGCCGACGTGTCGACGAC
CTCTCCGAAATCGGGTTCCGAACAGCCGCTGCGCACGTGCGCGCACAACT
TGATACCTGGCGCCTTGAGTACGAGGCAACCAGCACTGCTCTGACGAACA
GTGATGTGGACAGAGCAACAACAGCTTTCGAATGGGCCGTCCGATTACGA
CTACATCAGATCGTGGACGGATATGATCCGCACCATGCGGACGTCGAGAA
TGCCCTCTCTCGTATTGTGACGGCCGTGTTGGCGATCCCTTATGGTAGTC
CCGTGGAAGGTACTCTGTTGTTTCCGTTGGTGATTGCTGGCGCCAGCTGT
AGGGATAATATGGAGCGCAGGATGGTTGTTAAGGAACGGTTGATGGTGAT
GGAGAATACGTTGGGGTTTGGGCATATTTCGCATGCGAGACGGTTGCTAG
AGACGGTTTGGGCTGATGAAGGAGGGGATGGGAATTGGGCGAGAATTAGG
TATAGTATGTTTCCGGGGGTGGTGTTTGTTTAGGGCTTCCCGATCGCGCG
GTGGATGTACCTCCTGCAAGGCGCGGTAAAGGACACCTATGAGACCCCCA
ATACTACTGCATTGCACCGTCTGACAGCTAATAGAAAGAAGAAGTGTGAT
GAGAGCCGACCTCGATGTAGTGACTGTCGTCGCTTAAACTTACCATGCCA
CTGGAATAATCCAAGGGAGCGATCTCCATCGCCAGCCCTCGCCTCTCCGC
AGCCGTCGCCTACGTCTCCCTCTTCCGAACCTGCTCATGGAACTATCCTA
TCTTCCGTTTCGGATCTAGTCCCAGAGCCCGATCCGATATCCCCTTCCGA
GAACATATTATCATCCGTTAGTGATGATCCGCTATCTCCATTCTCGCCTC
TTTGGCTCGATGTGGAGATGATCCTCGGACCCATTCAGTCCCCAGATGGC
GCTTTCAACCCCTATCTCCACAATGACGACGACCGTAGCCTATTCAATCA
CTATGTACATATCGTTTCACGAGCTCTATCACGTTCCACGACTACTGAAT
CCAACAACCCATTTCTAGCGACTCTGCTTCCCATGGCCGCCGCATCGGAG
ACGCTAACCAGCGTCATACTGGGCCTTAGTGGCTGCCACTGGCGGCGCAT
CTATCCTCAAATATGGGACCGTGCCCTGGCGCGCCAGGGACGAGGTCTGG
GCCACATCTAAACAACGCTGTGACGGCGCCTCGCCCTGCTCTCGTTGCGC
ACATGGCTGCTTCTGGTCGCGTCTGCGCCCGCCTTGGCACAGGTGAGCAA
CCTACTCCGTCGGCCGAACCAAAGTCGCCAATCTTTCCTCGAGGCCTGCG
CCACAATTCTCCTCCTCTGCCTCACAGAGCTATTCGAGGGCACCTCTCGT
GTCTGGAAATGGCATCTCAAAGCCGCAGGAAATCTTCTCAGTACTGCGGC
AGGTACCACAGATCGCCACCGCCTCGCATCAACCCCTGAAGGGACCTTTT
GTCTCCAACTCTTCCACTACCTTGACGCCATGTCCACCATATCGAGATGT
AAACCCCCGTTGTTACGTGCAGGTGAGCGACTTACGGACCTTACCTCATC
AACTTCCTGCTCTTCCCTCCCAGTACCCCTCGGCGACAATTCTATCTCCG
GGATCCCTCCACCCCTACTAGAATATCTCGGCTGGGTCAACCTCCTCGCC
GCCCACCGCAGCCGACGTGTCGACGACCTCTCCGAAATCGGGTTCCGAAC
AGCCGCTGCGCACGTGCGCGCACAACTTGATACCTGGCGCCTTGAGTACG
AGGCAACCAGCACTGCTCTGACGAACAGTGATGTGGACAGAGCAACAACA
GCTTTCGAATGGGCCGTCCGATTACGACTACATCAGATCGTGGACGGATA
TGATCCGCACCATGCGGACGTCGAGAATGCCCTCTCTCGTATTGTGACGG
CCGTGTTGGCGATCCCTTATGGTAGTCCCGTGGAAGGTACTCTGTTGTTT
CCGTTGGTGATTGCTGGCGCCAGCTGTAGGGATAATATGGAGCGCAGGAT
GGTTGTTAAGGAACGGTTGATGGTGATGGAGAATACGTTGGGGTTTGGGC
ATATTTCGCATGCGAGACGGTTGCTAGAGACGGTTTGGGCTGATGAAGGA
GGGGATGGGAATTGGGCGAGAATTAGGTATAGTATGTTTCCGGGGGTGGT
GTTTGTTTAGGGCTTCCCGATCGCGCGGTGGATGTACCTCCTGCAAGGCG
CGGTAAAGGACACCTATGAGACCCCCAATACTACTGCATTGCACCGTCTG
ACAGCTAATAGAAAGAAGAAGTGTGATGAGAGCCGACCTCGATGTAGTGA
CTGTCGTCGCTTAAACTTACCATGCCACTGGAATAATCCAAGGGAGCGAT
CTCCATCGCCAGCCCTCGCCTCTCCGCAGCCGTCGCCTACGTCTCCCTCT
TCCGAACCTGCTCATGGAACTATCCTATCTTCCGTTTCGGATCTAGTCCC
AGAGCCCGATCCGATATCCCCTTCCGAGAACATATTATCATCCGTTAGTG
ATGATCCGCTATCTCCATTCTCGCCTCTTTGGCTCGATGTGGAGATGATC
CTCGGACCCATTCAGTCCCCAGATGGCGCTTTCAACCCCTATCTCCACAA
TGACGACGACCGTAGCCTATTCAATCACTATGTACATATCGTTTCACGAG
CTCTATCACGTTCCACGACTACTGAATCCAACAACCCATTTCTAGCGACT
CTGCTTCCCATGGCCGCCGCATCGGAGACGCTAACCAGCGTCATACTGGG
CCTTAGTGGCTGCCACTGGCGGCGCATCTATCCTCAAATATGGGACCGTG
CCCTGGCGCGCCAGGGACGAGGTCTGGGCCACATCTAAACAACGCTGTGA
CGGCGCCTCGCCCTGCTCTCGTTGCGCACATGGCTGCTTCTGGTCGCGTC
TGCGCCCGCCTTGGCACAGGTGAGCAACCTACTCCGTCGGCCGAACCAAA
GTCGCCAATCTTTCCTCGAGGCCTGCGCCACAATTCTCCTCCTCTGCCTC
ACAGAGCTATTCGAGGGCACCTCTCGTGTCTGGAAATGGCATCTCAAAGC
CGCAGGAAATCTTCTCAGTACTGCGGCAGGTACCACAGATCGCCACCGCC
TCGCATCAACCCCTGAAGGGACCTTTTGTCTCCAACTCTTCCACTACCTT
GACGCCATGTCCACCATATCGAGATGTAAACCCCCGTTGTTACGTGCAGG
TGAGCGACTTACGGACCTTACCTCATCAACTTCCTGCTCTTCCCTCCCAG
TACCCCTCGGCGACAATTCTATCTCCGGGATCCCTCCACCCCTACTAGAA
TATCTCGGCTGGGTCAACCTCCTCGCCGCCCACCGCAGCCGACGTGTCGA
CGACCTCTCCGAAATCGGGTTCCGAACAGCCGCTGCGCACGTGCGCGCAC
AACTTGATACCTGGCGCCTTGAGTACGAGGCAACCAGCACTGCTCTGACG
AACAGTGATGTGGACAGAGCAACAACAGCTTTCGAATGGGCCGTCCGATT
ACGACTACATCAGATCGTGGACGGATATGATCCGCACCATGCGGACGTCG
AGAATGCCCTCTCTCGTATTGTGACGGCCGTGTTGGCGATCCCTTATGGT
AGTCCCGTGGAAGGTACTCTGTTGTTTCCGTTGGTGATTGCTGGCGCCAG
CTGTAGGGATAATATGGAGCGCAGGATGGTTGTTAAGGAACGGTTGATGG
TGATGGAGAATACGTTGGGGTTTGGGCATATTTCGCATGCGAGACGGTTG
CTAGAGACGGTTTGGGCTGATGAAGGAGGGGATGGGAATTGGGCGAGAAT
TAGGTATAGTATGTTTCCGGGGGTGGTGTTTGTTTAGGGCTTCCCGATCG
CGCGGTGGATGTACCTCCTGCAAGGCGCGGTAAAGGACACCTATGAGACC
CCCAATACTACTGCATTGCACCGTCTGACAGCTAATAGAAAGAAGAAGTG
TGATGAGAGCCGACCTCGATGTAGTGACTGTCGTCGCTTAAACTTACCAT
GCCACTGGAATAATCCAAGGGAGCGATCTCCATCGCCAGCCCTCGCCTCT
CCGCAGCCGTCGCCTACGTCTCCCTCTTCCGAACCTGCTCATGGAACTAT
CCTATCTTCCGTTTCGGATCTAGTCCCAGAGCCCGATCCGATATCCCCTT
CCGAGAACATATTATCATCCGTTAGTGATGATCCGCTATCTCCATTCTCG
CCTCTTTGGCTCGATGTGGAGATGATCCTCGGACCCATTCAGTCCCCAGA
TGGCGCTTTCAACCCCTATCTCCACAATGACGACGACCGTAGCCTATTCA
ATCACTATGTACATATCGTTTCACGAGCTCTATCACGTTCCACGACTACT
GAATCCAACAACCCATTTCTAGCGACTCTGCTTCCCATGGCCGCCGCATC
GGAGACGCTAACCAGCGTCATACTGGGCCTTAGTGGCTGCCACTGGCGGC
GCATCTATCCTCAAATATGGGACCGTGCCCTGGCGCGCCAGGGACGAGGT
CTGGGCCACATCTAAACAACGCTGTGACGGCGCCTCGCCCTGCTCTCGTT
GCGCACATGGCTGCTTCTGGTCGCGTCTGCGCCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR036864 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:468514..470424 - |
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