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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:477562..480886- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007934-T1 ID=KJC3_007934-T1|Name=KJC3_007934-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3325bp|location=Sequence derived from alignment at ch6:477562..480886- (Aspergillus niger KJC3) CAGCTCAATTCAGTCACTAGTCTAGTCCTTGGTAAATTCATTTGAAATGG
TAGCAGTCCCTGTGTCATGATATCCAGTTTGTTTTCCCCACACTAACTGC
TAGCACTAACACTAAAGTACCTTAAATTTCGTCTCACTACTGTCGGATAC
CGACCCATCTTCAACCTGGATGATGCCGGGCGCCACAGCGTGCAAGGTTT
TATGGCATCGCGGAGCAATCAACCGCCCTGAGCCCAGCACCTGAATCCTC
TGTGCTGACCCCGGTGTCATCATACCACAGATAAATTTCATGCTAACAAC
AATCATTGAAAATACACAGCCGAAAGATGGCATACAAGTCATCCCGACCC
CTCCTCCTGAGGTGAGACGCGAATCATAATCAAACCCGACGAGGACTCCG
GCTGCAAGCCCGCCCTTGCGGTGGCAAGTGCAACGCTATTTCACCATCAA
ATACCGATCATGCCATACATGATGCTGCGAGGAGTCCGGAGCTTTCAGAG
TGTGTTACCGGTGGTTCATCGGTCAAAGAACATATGACGAAAAGCAAAAT
GTACCGAAACGCGCGGGGAAGGCGTCGGACGTAGGCCAAGACCCCAGAGC
CCCGAGCTTGGCGGACCGACCATGAACCGTGGATTTCAGGTGGCAGTCAA
GCAGCTACCATTGGATTCTTCCAAGTCAACCTGTCATATATGCCGGGGTA
ATTTCCCATCTGAGTGATGACATAAGATTTGACTTTCCCCGGATCCCAAC
CATAGATTGACCGACCCCATCGAAGTGCTTACAACGTATCAAGATCGGCA
TTCAACCGGATTCACCGAAGCCCGAAGTTACAGTCTCGGTCTATGTCAGA
CATCAGTGGCTAATGCGGGGTCCCATGGGCCCGAATTCAGGACCACCACG
TGAGCCGTTGAACATTATGCTGGGGTAACTCTTGTCCGAACAAAGTATTG
GAGACGAGTCCCTTTTGGCCTGTCAGACAAGCAGACAAAGAAGAAAGGGA
GTCCAGCCCAATTGGTGACATCACGGAACCATCATCAGGGATTGCTAACG
CTGCTCCCTTGGTATATATATTCGTGTCCTCAAGCCAGACTCACAGCTCA
GTACCGCAGGGACACTGCCATCACGGTCTGCAAATCTGACGCGCACTTTA
TCTGACAAAGATGAGATTACCAAAAATTAAAATGCCTCGTAAGAGGCCGC
AAGATGAACTCAATGGTGATGTGCTGCAGCAAGAGGCGCAAGCTACCGGC
CCCAATGGCCAGAAATCTGAAGAGGGGATTGTGGATACACCTATCCCTCT
GCTCACGTGGCGTTCTTTCTTAATGGGCATTTTCGTGTCAATGGGTGGTT
TCCTCTTCGGCTACGACACTGGCCAAATTTCAGGCTTCTTGGAGATGCCG
AACTTTCTCCAAAGATACGGACAACAGCAAGCTGACGGAACATACTATTT
CTCCAATGCCCGTTCGGGTCTGATTGTCGCGCTGGTAAGACACGCATGGA
CAATTTGACACTAGCTCAATCTTGCTGATAAGCGCAGCTTTCAATAGGTA
CCTTGATCGGCGCCCTTATTGCAGCTCCCATCGCAGATCGTGTTGGCCGG
AAATGGTCCATCAGCGGCTGGAGTGCCATGGTGTGTGTCGGTATCACCAT
ACAAATATCTTCCCCTTTCGGAAAGTGGTACCAGGTAGCCATGGGTCGTT
GGGTCGCTGGTCTCGGCGTTGGGGCTCTATCATTGCTTGTTCCCATGTAC
CAAGCGGAAACTGGACCGAGGCACATTCGTGGATCTCTTGTTAGGTATGC
CTACAAACCTGCATTGTTCTTGATTGGAAGCTTACGTCAACAGCACTTAT
CAGCTTTTCATCACCCTTGGAATCTTCGTCGCCAACTGTATCAACTTCGG
AACAGAAGCTCGAAATGATACAGGCTCCTGGCGTATTCCCATGGGCATCA
CCTACATCTGGGCCATGATCCTGGGCTTCGGAATTGCACTATTCCCCGAA
AGTGCCCGGTACGACTATAGACATGGAAGGGAGGCGAAAGCAGCTCGTAC
CCTATCGAGAATGTACGGGATTCCTGAAAACCACCGTATGCTGAAGCTCG
AGATCGGCGAGATCAGGCAGAAGTTCGTGGAAGAACAGGAACGCGGAGAG
ATAACCTGGTCTCATCTTTTCCATGCACCCCGCATGAAGTATCGCGTCGC
AGTGGGAGTCGCCCTTCAAGCACTGCAACAGTTAACGGGAGCGAATTACT
TTTTCTACTACGGGACGACGATCTTTCGAGGCGCCGGGATTTCAAATTCC
TACGTAACACAAATGATTCTTGGCGGTGTGAATTTCGGAACGACGTTCCT
AGGGCTGTACCTGATCGAGAACTACGGTCGTCGTCGATCCCTGATAACTG
GAGCATTGTGGATGTTTGTTTGTTTCATGGTTTTCGCCTCCGTGGGCCAT
TTCTCTCTAGACCATGAAAACCCAGAACGGACACACACAGCTGGCGTGGT
CATGGTTGTTTTCGCCTGTCTTTTCATTCTCGGTATGTCAGCCGTTGCAC
ATCCCCATTCTAATCCAAATACGTAGTCCCACTTGCTAACCGCCACAAAG
GTTTCGCATCAACATGGGGTCCCATGGTGTGGACCATTATCGCAGAGCTG
TATCCCTCCGAATTCCGTGCCCGCGCCATGTCTCTCGCCACAGCATCCAA
TTGGCTCTGGAACTTCCTTCTCGCCTTTTTCACCCCCTTCATCACCAGTG
CCATTGACTTCCGCCTCGGCTACGTCTTTGCCGGCTGCCTCTTCCTTGCG
GCGGGCCTGGTTTACGTGGCAGTCATTGAAGGTCGTGGCCGTACATTGGA
AGAGATCGATACCATGTACGTTATGAAGGTGCCGCCCTGGAAGAGCTCCA
AGTATGTATTTCCGGACATCGATCCATATGATCGTCGCGGTTCGATTTTA
TCGAAAGCAGGGGCATCTCATATTCCGCAGGTGAGCGGTGGAAACGAGAC
GCTCAGCCCCCACACAACTGAGGTGTAATTCTTGGGTTCTCCACCGGCTA
GGAGTTATGCTTGGAGCTTCGAAGCTTTGGGAAGCCGGTAGTACACTTCC
ATAACTGACTCCCAGCAAATTCCATGATCACGAACAGGATATGCTGTCTC
TTGGTGACTACTGTGGCAGCTGCATTCTTGTACTACTTTTCTGAGAGACG
TTTTCTGTATACCTTTTAATCTCGTTATGTGTTACGACGCGACGTTTTGT
ACGTATGATTGATGAGTTACTGCTATGATTGTGATAATCCCTTGAATTTA
GATGCAAGCTTAATCAACTTTATGC back to topCoding sequence (CDS) from alignment at ch6:477562..480886- >KJC3_007934-T1 ID=KJC3_007934-T1|Name=KJC3_007934-T1|organism=Aspergillus niger KJC3|type=CDS|length=6792bp|location=Sequence derived from alignment at ch6:477562..480886- (Aspergillus niger KJC3) GTTTCGCATCAACATGGGGTCCCATGGTGTGGACCATTATCGCAGAGCTG TATCCCTCCGAATTCCGTGCCCGCGCCATGTCTCTCGCCACAGCATCCAA TTGGCTCTGGAACTTCCTTCTCGCCTTTTTCACCCCCTTCATCACCAGTG CCATTGACTTCCGCCTCGGCTACGTCTTTGCCGGCTGCCTCTTCCTTGCG GCGGGCCTGGTTTACGTGGCAGTCATTGAAGGTCGTGGCCGTACATTGGA AGAGATCGATACCATGTACGTTATGAAGGTGCCGCCCTGGAAGAGCTCCA AGTATGTATTTCCGGACATCGATCCATATGATCGTCGCGGTTCGATTTTA TCGAAAGCAGGGGCATCTCATATTCCGCAGGTGAGCGGTGGAAACGAGAC GCTCAGCCCCCACACAACTGAGGTGTAACACTTATCAGCTTTTCATCACC CTTGGAATCTTCGTCGCCAACTGTATCAACTTCGGAACAGAAGCTCGAAA TGATACAGGCTCCTGGCGTATTCCCATGGGCATCACCTACATCTGGGCCA TGATCCTGGGCTTCGGAATTGCACTATTCCCCGAAAGTGCCCGGTACGAC TATAGACATGGAAGGGAGGCGAAAGCAGCTCGTACCCTATCGAGAATGTA CGGGATTCCTGAAAACCACCGTATGCTGAAGCTCGAGATCGGCGAGATCA GGCAGAAGTTCGTGGAAGAACAGGAACGCGGAGAGATAACCTGGTCTCAT CTTTTCCATGCACCCCGCATGAAGTATCGCGTCGCAGTGGGAGTCGCCCT TCAAGCACTGCAACAGTTAACGGGAGCGAATTACTTTTTCTACTACGGGA CGACGATCTTTCGAGGCGCCGGGATTTCAAATTCCTACGTAACACAAATG ATTCTTGGCGGTGTGAATTTCGGAACGACGTTCCTAGGGCTGTACCTGAT CGAGAACTACGGTCGTCGTCGATCCCTGATAACTGGAGCATTGTGGATGT TTGTTTGTTTCATGGTTTTCGCCTCCGTGGGCCATTTCTCTCTAGACCAT GAAAACCCAGAACGGACACACACAGCTGGCGTGGTCATGGTTGTTTTCGC CTGTCTTTTCATTCTCGCTTTCAATAGGTACCTTGATCGGCGCCCTTATT GCAGCTCCCATCGCAGATCGTGTTGGCCGGAAATGGTCCATCAGCGGCTG GAGTGCCATGGTGTGTGTCGGTATCACCATACAAATATCTTCCCCTTTCG GAAAGTGGTACCAGGTAGCCATGGGTCGTTGGGTCGCTGGTCTCGGCGTT GGGGCTCTATCATTGCTTGTTCCCATGTACCAAGCGGAAACTGGACCGAG GCACATTCGTGGATCTCTTGTTAGATGAGATTACCAAAAATTAAAATGCC TCGTAAGAGGCCGCAAGATGAACTCAATGGTGATGTGCTGCAGCAAGAGG CGCAAGCTACCGGCCCCAATGGCCAGAAATCTGAAGAGGGGATTGTGGAT ACACCTATCCCTCTGCTCACGTGGCGTTCTTTCTTAATGGGCATTTTCGT GTCAATGGGTGGTTTCCTCTTCGGCTACGACACTGGCCAAATTTCAGGCT TCTTGGAGATGCCGAACTTTCTCCAAAGATACGGACAACAGCAAGCTGAC GGAACATACTATTTCTCCAATGCCCGTTCGGGTCTGATTGTCGCGCTGGT TTCGCATCAACATGGGGTCCCATGGTGTGGACCATTATCGCAGAGCTGTA TCCCTCCGAATTCCGTGCCCGCGCCATGTCTCTCGCCACAGCATCCAATT GGCTCTGGAACTTCCTTCTCGCCTTTTTCACCCCCTTCATCACCAGTGCC ATTGACTTCCGCCTCGGCTACGTCTTTGCCGGCTGCCTCTTCCTTGCGGC GGGCCTGGTTTACGTGGCAGTCATTGAAGGTCGTGGCCGTACATTGGAAG AGATCGATACCATGTACGTTATGAAGGTGCCGCCCTGGAAGAGCTCCAAG TATGTATTTCCGGACATCGATCCATATGATCGTCGCGGTTCGATTTTATC GAAAGCAGGGGCATCTCATATTCCGCAGGTGAGCGGTGGAAACGAGACGC TCAGCCCCCACACAACTGAGGTGTAACACTTATCAGCTTTTCATCACCCT TGGAATCTTCGTCGCCAACTGTATCAACTTCGGAACAGAAGCTCGAAATG ATACAGGCTCCTGGCGTATTCCCATGGGCATCACCTACATCTGGGCCATG ATCCTGGGCTTCGGAATTGCACTATTCCCCGAAAGTGCCCGGTACGACTA TAGACATGGAAGGGAGGCGAAAGCAGCTCGTACCCTATCGAGAATGTACG GGATTCCTGAAAACCACCGTATGCTGAAGCTCGAGATCGGCGAGATCAGG CAGAAGTTCGTGGAAGAACAGGAACGCGGAGAGATAACCTGGTCTCATCT TTTCCATGCACCCCGCATGAAGTATCGCGTCGCAGTGGGAGTCGCCCTTC AAGCACTGCAACAGTTAACGGGAGCGAATTACTTTTTCTACTACGGGACG ACGATCTTTCGAGGCGCCGGGATTTCAAATTCCTACGTAACACAAATGAT TCTTGGCGGTGTGAATTTCGGAACGACGTTCCTAGGGCTGTACCTGATCG AGAACTACGGTCGTCGTCGATCCCTGATAACTGGAGCATTGTGGATGTTT GTTTGTTTCATGGTTTTCGCCTCCGTGGGCCATTTCTCTCTAGACCATGA AAACCCAGAACGGACACACACAGCTGGCGTGGTCATGGTTGTTTTCGCCT GTCTTTTCATTCTCGCTTTCAATAGGTACCTTGATCGGCGCCCTTATTGC AGCTCCCATCGCAGATCGTGTTGGCCGGAAATGGTCCATCAGCGGCTGGA GTGCCATGGTGTGTGTCGGTATCACCATACAAATATCTTCCCCTTTCGGA AAGTGGTACCAGGTAGCCATGGGTCGTTGGGTCGCTGGTCTCGGCGTTGG GGCTCTATCATTGCTTGTTCCCATGTACCAAGCGGAAACTGGACCGAGGC ACATTCGTGGATCTCTTGTTAGATGAGATTACCAAAAATTAAAATGCCTC GTAAGAGGCCGCAAGATGAACTCAATGGTGATGTGCTGCAGCAAGAGGCG CAAGCTACCGGCCCCAATGGCCAGAAATCTGAAGAGGGGATTGTGGATAC ACCTATCCCTCTGCTCACGTGGCGTTCTTTCTTAATGGGCATTTTCGTGT CAATGGGTGGTTTCCTCTTCGGCTACGACACTGGCCAAATTTCAGGCTTC TTGGAGATGCCGAACTTTCTCCAAAGATACGGACAACAGCAAGCTGACGG AACATACTATTTCTCCAATGCCCGTTCGGGTCTGATTGTCGCGCTGGTTT CGCATCAACATGGGGTCCCATGGTGTGGACCATTATCGCAGAGCTGTATC CCTCCGAATTCCGTGCCCGCGCCATGTCTCTCGCCACAGCATCCAATTGG CTCTGGAACTTCCTTCTCGCCTTTTTCACCCCCTTCATCACCAGTGCCAT TGACTTCCGCCTCGGCTACGTCTTTGCCGGCTGCCTCTTCCTTGCGGCGG GCCTGGTTTACGTGGCAGTCATTGAAGGTCGTGGCCGTACATTGGAAGAG ATCGATACCATGTACGTTATGAAGGTGCCGCCCTGGAAGAGCTCCAAGTA TGTATTTCCGGACATCGATCCATATGATCGTCGCGGTTCGATTTTATCGA AAGCAGGGGCATCTCATATTCCGCAGGTGAGCGGTGGAAACGAGACGCTC AGCCCCCACACAACTGAGGTGTAACACTTATCAGCTTTTCATCACCCTTG GAATCTTCGTCGCCAACTGTATCAACTTCGGAACAGAAGCTCGAAATGAT ACAGGCTCCTGGCGTATTCCCATGGGCATCACCTACATCTGGGCCATGAT CCTGGGCTTCGGAATTGCACTATTCCCCGAAAGTGCCCGGTACGACTATA GACATGGAAGGGAGGCGAAAGCAGCTCGTACCCTATCGAGAATGTACGGG ATTCCTGAAAACCACCGTATGCTGAAGCTCGAGATCGGCGAGATCAGGCA GAAGTTCGTGGAAGAACAGGAACGCGGAGAGATAACCTGGTCTCATCTTT TCCATGCACCCCGCATGAAGTATCGCGTCGCAGTGGGAGTCGCCCTTCAA GCACTGCAACAGTTAACGGGAGCGAATTACTTTTTCTACTACGGGACGAC GATCTTTCGAGGCGCCGGGATTTCAAATTCCTACGTAACACAAATGATTC TTGGCGGTGTGAATTTCGGAACGACGTTCCTAGGGCTGTACCTGATCGAG AACTACGGTCGTCGTCGATCCCTGATAACTGGAGCATTGTGGATGTTTGT TTGTTTCATGGTTTTCGCCTCCGTGGGCCATTTCTCTCTAGACCATGAAA ACCCAGAACGGACACACACAGCTGGCGTGGTCATGGTTGTTTTCGCCTGT CTTTTCATTCTCGCTTTCAATAGGTACCTTGATCGGCGCCCTTATTGCAG CTCCCATCGCAGATCGTGTTGGCCGGAAATGGTCCATCAGCGGCTGGAGT GCCATGGTGTGTGTCGGTATCACCATACAAATATCTTCCCCTTTCGGAAA GTGGTACCAGGTAGCCATGGGTCGTTGGGTCGCTGGTCTCGGCGTTGGGG CTCTATCATTGCTTGTTCCCATGTACCAAGCGGAAACTGGACCGAGGCAC ATTCGTGGATCTCTTGTTAGATGAGATTACCAAAAATTAAAATGCCTCGT AAGAGGCCGCAAGATGAACTCAATGGTGATGTGCTGCAGCAAGAGGCGCA AGCTACCGGCCCCAATGGCCAGAAATCTGAAGAGGGGATTGTGGATACAC CTATCCCTCTGCTCACGTGGCGTTCTTTCTTAATGGGCATTTTCGTGTCA ATGGGTGGTTTCCTCTTCGGCTACGACACTGGCCAAATTTCAGGCTTCTT GGAGATGCCGAACTTTCTCCAAAGATACGGACAACAGCAAGCTGACGGAA CATACTATTTCTCCAATGCCCGTTCGGGTCTGATTGTCGCGCTGGTTTCG CATCAACATGGGGTCCCATGGTGTGGACCATTATCGCAGAGCTGTATCCC TCCGAATTCCGTGCCCGCGCCATGTCTCTCGCCACAGCATCCAATTGGCT CTGGAACTTCCTTCTCGCCTTTTTCACCCCCTTCATCACCAGTGCCATTG ACTTCCGCCTCGGCTACGTCTTTGCCGGCTGCCTCTTCCTTGCGGCGGGC CTGGTTTACGTGGCAGTCATTGAAGGTCGTGGCCGTACATTGGAAGAGAT CGATACCATGTACGTTATGAAGGTGCCGCCCTGGAAGAGCTCCAAGTATG TATTTCCGGACATCGATCCATATGATCGTCGCGGTTCGATTTTATCGAAA GCAGGGGCATCTCATATTCCGCAGGTGAGCGGTGGAAACGAGACGCTCAG CCCCCACACAACTGAGGTGTAACACTTATCAGCTTTTCATCACCCTTGGA ATCTTCGTCGCCAACTGTATCAACTTCGGAACAGAAGCTCGAAATGATAC AGGCTCCTGGCGTATTCCCATGGGCATCACCTACATCTGGGCCATGATCC TGGGCTTCGGAATTGCACTATTCCCCGAAAGTGCCCGGTACGACTATAGA CATGGAAGGGAGGCGAAAGCAGCTCGTACCCTATCGAGAATGTACGGGAT TCCTGAAAACCACCGTATGCTGAAGCTCGAGATCGGCGAGATCAGGCAGA AGTTCGTGGAAGAACAGGAACGCGGAGAGATAACCTGGTCTCATCTTTTC CATGCACCCCGCATGAAGTATCGCGTCGCAGTGGGAGTCGCCCTTCAAGC ACTGCAACAGTTAACGGGAGCGAATTACTTTTTCTACTACGGGACGACGA TCTTTCGAGGCGCCGGGATTTCAAATTCCTACGTAACACAAATGATTCTT GGCGGTGTGAATTTCGGAACGACGTTCCTAGGGCTGTACCTGATCGAGAA CTACGGTCGTCGTCGATCCCTGATAACTGGAGCATTGTGGATGTTTGTTT GTTTCATGGTTTTCGCCTCCGTGGGCCATTTCTCTCTAGACCATGAAAAC CCAGAACGGACACACACAGCTGGCGTGGTCATGGTTGTTTTCGCCTGTCT TTTCATTCTCGCTTTCAATAGGTACCTTGATCGGCGCCCTTATTGCAGCT CCCATCGCAGATCGTGTTGGCCGGAAATGGTCCATCAGCGGCTGGAGTGC CATGGTGTGTGTCGGTATCACCATACAAATATCTTCCCCTTTCGGAAAGT GGTACCAGGTAGCCATGGGTCGTTGGGTCGCTGGTCTCGGCGTTGGGGCT CTATCATTGCTTGTTCCCATGTACCAAGCGGAAACTGGACCGAGGCACAT TCGTGGATCTCTTGTTAGATGAGATTACCAAAAATTAAAATGCCTCGTAA GAGGCCGCAAGATGAACTCAATGGTGATGTGCTGCAGCAAGAGGCGCAAG CTACCGGCCCCAATGGCCAGAAATCTGAAGAGGGGATTGTGGATACACCT ATCCCTCTGCTCACGTGGCGTTCTTTCTTAATGGGCATTTTCGTGTCAAT GGGTGGTTTCCTCTTCGGCTACGACACTGGCCAAATTTCAGGCTTCTTGG AGATGCCGAACTTTCTCCAAAGATACGGACAACAGCAAGCTGACGGAACA TACTATTTCTCCAATGCCCGTTCGGGTCTGATTGTCGCGCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
GO:0016020 | membrane |
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_007934-T1.utr3p1 | KJC3_007934-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR020846 |
DBxref | InterPro:IPR005829 |
DBxref | InterPro:IPR005828 |
DBxref | InterPro:IPR003663 |
DBxref | PFAM:PF00083 |
DBxref | PFAM:PF07690 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:477562..480886 - |
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