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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:488587..490063+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007939-T1 ID=KJC3_007939-T1|Name=KJC3_007939-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1477bp|location=Sequence derived from alignment at ch6:488587..490063+ (Aspergillus niger KJC3)
CCTAATTCTGGATACAAATTGAGCTCCATTGGCAGATTGTCATAAGACGA
TATCTGAATCTATAATTTAGGGCAAATCATATCTACCGGCAACGTTCAGT
TGGATCTAACTCAGTTACTGCATCTCTAACGGCCATCATAGTCCCTGCGC
CAAACACTTCAACCCCGCATCAACCAGCAATCATGCCGCCACATCTCCCC
GAAGGAGGCAAGACCCTCGTCTACTTCACTGTAGATGGCCACGATGTTAA
GCTTGACTACTATCTACCACCCAATGCGAGCGGAAACCTCCCCGCAATCA
TCTACTACCACGGTGGCGGCATGACCGCCGGCTCCCGCCGGGGCATGGGA
TTTCCACACTGGCTATACAGTACGTCCCTCCACCTAATCCATCAAAGAAC
AACCAGCCAAACAGACTTTCTAACCAAATACACAGACCACTGCCAACAAA
AGAACTACATCTTCATCTCTGCCGACTACCGTCTCTGCCACCCCACCACA
GCGCTCGACCAGATTGAAGACGCGAAAGCCATGTTCCGCTTCCTAGCAGG
AGACTTCCAGAACTCCCTCCCAGAAGGCACATCGCTCGATACCACCCGCG
TCGCCGTAACCGGCTTCTCAGCAGGCGGATACTCCGCCCGCGCTGCCTGC
ATTTACGCCACCCCCAAGCCCGCAGCCATGCTAACCGGTTTCGGCAGCGC
TGGCGACTGGCTCCTCGATCACTGGACAACCGGCCGTCCTCCCACCTCCA
TCGCTAACAGGGTGAACCTAGATGAAGTTCCCAAGTTACTTGCCGATAAG
ACCGTCGTCAGTGACGACATGCCCGAAGACGGGGGTGTGATGACGAACCG
GTTCGCGCTGACGGTTCGATGGGAACTGGACGGGACGTTCCTGGATGGGT
GTTTGGGACGGCCTGGGCTTGGTGCGGAGCTCAATAAGCTGGAATATGCG
CAGCGGGCGGCTGCTATCCCGGAGGACTTGAAGCCGGCATTTTTGCAGTT
GCATGTGACAGGGGAGCATCCGCCTGCGGTGTTTGTGCATGGGACGGCGG
ATGATGTGGTACCCGATAAGGAGAGCATCAACCATTATGAGCAGCTGAAG
AAGTTGGGGGTAAAGACAGAGCTGTTGCTTGTTGAGGGGGGTGCGCATGG
ATTAATGGATTTCAGCCAGGGATTTCCGCCGAAGCCGGCTAAGGGGTCTG
TGGAGGCGTATAACAGGGGTTTGGAGTTTATTGATGAGGTTTTCGGCCGC
GTCTAGAGCTGGTGTGGGCTTATAATGTGGTTTAGAGGCTGTATGATTGA
TTATGAGTATGGTATAGATGTTTAGTTGCTTGTCGAATATCGGATACAGC
CGCTCTCGTGTAGAATAGATGTTTTTAGATCGATGAGAACGGTTGAATTG
TTGAGATATCTAACTCTTCACAAAGGAATATGGCATAGCGCCACGTCGAC
CCTTGACGACATTCTACTAGAAACGTG back to topCoding sequence (CDS) from alignment at ch6:488587..490063+ >KJC3_007939-T1 ID=KJC3_007939-T1|Name=KJC3_007939-T1|organism=Aspergillus niger KJC3|type=CDS|length=2016bp|location=Sequence derived from alignment at ch6:488587..490063+ (Aspergillus niger KJC3)
ATGCCGCCACATCTCCCCGAAGGAGGCAAGACCCTCGTCTACTTCACTGT
AGATGGCCACGATGTTAAGCTTGACTACTATCTACCACCCAATGCGAGCG
GAAACCTCCCCGCAATCATCTACTACCACGGTGGCGGCATGACCGCCGGC
TCCCGCCGGGGCATGGGATTTCCACACTGGCTATACAACCACTGCCAACA
AAAGAACTACATCTTCATCTCTGCCGACTACCGTCTCTGCCACCCCACCA
CAGCGCTCGACCAGATTGAAGACGCGAAAGCCATGTTCCGCTTCCTAGCA
GGAGACTTCCAGAACTCCCTCCCAGAAGGCACATCGCTCGATACCACCCG
CGTCGCCGTAACCGGCTTCTCAGCAGGCGGATACTCCGCCCGCGCTGCCT
GCATTTACGCCACCCCCAAGCCCGCAGCCATGCTAACCGGTTTCGGCAGC
GCTGGCGACTGGCTCCTCGATCACTGGACAACCGGCCGTCCTCCCACCTC
CATCGCTAACAGGGTGAACCTAGATGAAGTTCCCAAGTTACTTGCCGATA
AGACCGTCGTCAGTGACGACATGCCCGAAGACGGGGGTGTGATGACGAAC
CGGTTCGCGCTGACGGTTCGATGGGAACTGGACGGGACGTTCCTGGATGG
GTGTTTGGGACGGCCTGGGCTTGGTGCGGAGCTCAATAAGCTGGAATATG
CGCAGCGGGCGGCTGCTATCCCGGAGGACTTGAAGCCGGCATTTTTGCAG
TTGCATGTGACAGGGGAGCATCCGCCTGCGGTGTTTGTGCATGGGACGGC
GGATGATGTGGTACCCGATAAGGAGAGCATCAACCATTATGAGCAGCTGA
AGAAGTTGGGGGTAAAGACAGAGCTGTTGCTTGTTGAGGGGGGTGCGCAT
GGATTAATGGATTTCAGCCAGGGATTTCCGCCGAAGCCGGCTAAGGGGTC
TGTGGAGGCGTATAACAGGGGTTTGGAGTTTATTGATGAGGTTTTCGGCC
GCGTCTAGATGCCGCCACATCTCCCCGAAGGAGGCAAGACCCTCGTCTAC
TTCACTGTAGATGGCCACGATGTTAAGCTTGACTACTATCTACCACCCAA
TGCGAGCGGAAACCTCCCCGCAATCATCTACTACCACGGTGGCGGCATGA
CCGCCGGCTCCCGCCGGGGCATGGGATTTCCACACTGGCTATACAACCAC
TGCCAACAAAAGAACTACATCTTCATCTCTGCCGACTACCGTCTCTGCCA
CCCCACCACAGCGCTCGACCAGATTGAAGACGCGAAAGCCATGTTCCGCT
TCCTAGCAGGAGACTTCCAGAACTCCCTCCCAGAAGGCACATCGCTCGAT
ACCACCCGCGTCGCCGTAACCGGCTTCTCAGCAGGCGGATACTCCGCCCG
CGCTGCCTGCATTTACGCCACCCCCAAGCCCGCAGCCATGCTAACCGGTT
TCGGCAGCGCTGGCGACTGGCTCCTCGATCACTGGACAACCGGCCGTCCT
CCCACCTCCATCGCTAACAGGGTGAACCTAGATGAAGTTCCCAAGTTACT
TGCCGATAAGACCGTCGTCAGTGACGACATGCCCGAAGACGGGGGTGTGA
TGACGAACCGGTTCGCGCTGACGGTTCGATGGGAACTGGACGGGACGTTC
CTGGATGGGTGTTTGGGACGGCCTGGGCTTGGTGCGGAGCTCAATAAGCT
GGAATATGCGCAGCGGGCGGCTGCTATCCCGGAGGACTTGAAGCCGGCAT
TTTTGCAGTTGCATGTGACAGGGGAGCATCCGCCTGCGGTGTTTGTGCAT
GGGACGGCGGATGATGTGGTACCCGATAAGGAGAGCATCAACCATTATGA
GCAGCTGAAGAAGTTGGGGGTAAAGACAGAGCTGTTGCTTGTTGAGGGGG
GTGCGCATGGATTAATGGATTTCAGCCAGGGATTTCCGCCGAAGCCGGCT
AAGGGGTCTGTGGAGGCGTATAACAGGGGTTTGGAGTTTATTGATGAGGT
TTTCGGCCGCGTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007939-T1.utr3p1 | KJC3_007939-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0003558 |
| Note | CAZy:CE10 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR013094 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:488587..490063 + |
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