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KJC3_007940-T1, KJC3_007940-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007940-T1
Unique NameKJC3_007940-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:490208..491293-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007940-T1 ID=KJC3_007940-T1|Name=KJC3_007940-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1086bp|location=Sequence derived from alignment at ch6:490208..491293- (Aspergillus niger KJC3)
CCCATTCAAGCCGCCTCTCCCCGTCAAAACAGACCCATCATCTCTATCCT
CCCAACCTCAGTATCTCTACCAAGAAAAAACCCTGCAAGAAAAGAGACCA
TGCGATCCCCAAGCGACCCTCTCCTCGCCTCCGAGTCCCAACCACTCCCT
CCCGGCCAAATCTATCTGCCCGATGAGGACGACGAAAACACACAATCCAC
AGAGCCCCTCATTGCACGCTGCCGCCGGTCGGCCCGCAACTATCTCTCCT
CCCGATTCGGCCACTACCTGGTCCTCTTCCTCGTCTCTGTGGATGTTGCA
TGTGTTTTTGCCGATTTCTTGATCGAAATCCACGTCTGCGAACTGGAGAA
GAAGTACAAGCATGTGCCTTCTGGGTGGGAGGATGCCCAGGAGGCGCTGA
GTATTACTGGGCTGGTATTTTCGTGTCTGTTTATGCATGAATTGGTGGTC
GCTGTGGGGAGTTTCGGGATGAGGTAAGTCTTTCCATTACTGTCCCTTCA
TATTGTCCTTTTACAGAGCTGAATGCCTTACATTGTTCGCGGTGGGTGGA
CGGTAGTTCTCAGGGGCACCTAGCTAACGATATCATCCCAGCTACTTCTC
CTCCAAGTTCCACATTTTCGATTCAGCGGTAATTATTGTCGCGTTTGCCA
TTGATGTGGCGATGAGAGGGTTGGTTGAGGAACTGGGTTCCCTGGTTGTG
GTTCTGCGATTGTGGCGCGTGTTTAAAATCATTGAGGAGCTGGAATCCGC
TAATGCGGATTCTTTGGAGGAGTATGAGCGTGAGATTGATCGGTTGAAGG
AGGAGAATTATCTCCTTCGTCGGAGAGCGGAGTTTGGAAGTGATGGTGTG
AATTGAATTTGGATTCGTGGGTGTGCTATCTAGGTATATGTGGATAGAGT
GTGGTGCAGGCTGGCTTGGGGACTGAGTGCATGATCTGGAGGTTTCTGTA
AAGATGGTCGGTGACGTGTAACGGTGATAGGCATCACAAGTTTCGGGTAT
ATAGTCCTTTTATATGGGTTGCATATCTATACTATCATGATGGGGCTTCG
AGCATGACCTGTGATTTGAAGGCGATTCGACGCCGG
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Coding sequence (CDS) from alignment at ch6:490208..491293-

>KJC3_007940-T1 ID=KJC3_007940-T1|Name=KJC3_007940-T1|organism=Aspergillus niger KJC3|type=CDS|length=1278bp|location=Sequence derived from alignment at ch6:490208..491293- (Aspergillus niger KJC3)
CTACTTCTCCTCCAAGTTCCACATTTTCGATTCAGCGGTAATTATTGTCG
CGTTTGCCATTGATGTGGCGATGAGAGGGTTGGTTGAGGAACTGGGTTCC
CTGGTTGTGGTTCTGCGATTGTGGCGCGTGTTTAAAATCATTGAGGAGCT
GGAATCCGCTAATGCGGATTCTTTGGAGGAGTATGAGCGTGAGATTGATC
GGTTGAAGGAGGAGAATTATCTCCTTCGTCGGAGAGCGGAGTTTGGAAGT
GATGGTGTGAATTGAATGCGATCCCCAAGCGACCCTCTCCTCGCCTCCGA
GTCCCAACCACTCCCTCCCGGCCAAATCTATCTGCCCGATGAGGACGACG
AAAACACACAATCCACAGAGCCCCTCATTGCACGCTGCCGCCGGTCGGCC
CGCAACTATCTCTCCTCCCGATTCGGCCACTACCTGGTCCTCTTCCTCGT
CTCTGTGGATGTTGCATGTGTTTTTGCCGATTTCTTGATCGAAATCCACG
TCTGCGAACTGGAGAAGAAGTACAAGCATGTGCCTTCTGGGTGGGAGGAT
GCCCAGGAGGCGCTGAGTATTACTGGGCTGGTATTTTCGTGTCTGTTTAT
GCATGAATTGGTGGTCGCTGTGGGGAGTTTCGGGATGAGCTACTTCTCCT
CCAAGTTCCACATTTTCGATTCAGCGGTAATTATTGTCGCGTTTGCCATT
GATGTGGCGATGAGAGGGTTGGTTGAGGAACTGGGTTCCCTGGTTGTGGT
TCTGCGATTGTGGCGCGTGTTTAAAATCATTGAGGAGCTGGAATCCGCTA
ATGCGGATTCTTTGGAGGAGTATGAGCGTGAGATTGATCGGTTGAAGGAG
GAGAATTATCTCCTTCGTCGGAGAGCGGAGTTTGGAAGTGATGGTGTGAA
TTGAATGCGATCCCCAAGCGACCCTCTCCTCGCCTCCGAGTCCCAACCAC
TCCCTCCCGGCCAAATCTATCTGCCCGATGAGGACGACGAAAACACACAA
TCCACAGAGCCCCTCATTGCACGCTGCCGCCGGTCGGCCCGCAACTATCT
CTCCTCCCGATTCGGCCACTACCTGGTCCTCTTCCTCGTCTCTGTGGATG
TTGCATGTGTTTTTGCCGATTTCTTGATCGAAATCCACGTCTGCGAACTG
GAGAAGAAGTACAAGCATGTGCCTTCTGGGTGGGAGGATGCCCAGGAGGC
GCTGAGTATTACTGGGCTGGTATTTTCGTGTCTGTTTATGCATGAATTGG
TGGTCGCTGTGGGGAGTTTCGGGATGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0005216ion channel activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007940KJC3_007940Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007940-T1KJC3_007940-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007940-T1.cdsKJC3_007940-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007940-T1.utr3p1KJC3_007940-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007940-T1.exon2KJC3_007940-T1.exon2Aspergillus niger KJC3exon
KJC3_007940-T1.exon1KJC3_007940-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007940-T1.utr5p1KJC3_007940-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR005821
DBxrefInterPro:IPR027359
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:490208..491293 -
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