|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:514096..514666+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007949-T1 ID=KJC3_007949-T1|Name=KJC3_007949-T1|organism=Aspergillus niger KJC3|type=mRNA|length=571bp|location=Sequence derived from alignment at ch6:514096..514666+ (Aspergillus niger KJC3)
ATGCAGTTCACTCTCACCAACGTTCTTGCCCTCACCCTCGCGGTCGCCAC
CGGCGTCTCTGCTGGCGCTGTCTCTGACTCCCAAGCCATTAAGACCCAGA
CTGAGGGCAAGTGCGATATTGGCAACGTCTCGTGCTGCAACCCAACCAAC
GAGGACAAGACTGATGGCTTCCTCAACAACCTGCTCGAGTGGGGTGTTAT
CGGCAGTCTGGTCAACGGTCAGGGATCCGCTTGCGCTCCGATCAGCCTCA
TTGATGAGCTTGGAATTCTGGGTATGATTGATCCTCTACATACAGTTTTG
ACCTTAGCTTTGGAAGATGTATCACTGACATTGATGAAATCATGAAACAG
CCCTCGTCAAGGATACCCCTGATGGACCGGTCTGCGAAAATGTCATTGCT
TGCTGCCCTGGTCAGGGTGCTCAGGTACGTCTGCCTTCTATTTTCCCTTC
CAACTTCATAGATTCTGTCCTTTTCTGTTTCAAATAGATCCTTAATAACT
AACATGACTATTTTTTACAGTGTGTCGCCATCGGTGACGGCTCTGGCTCC
GGCTCCGGCTACAGCGACTAA back to topCoding sequence (CDS) from alignment at ch6:514096..514666+ >KJC3_007949-T1 ID=KJC3_007949-T1|Name=KJC3_007949-T1|organism=Aspergillus niger KJC3|type=CDS|length=1188bp|location=Sequence derived from alignment at ch6:514096..514666+ (Aspergillus niger KJC3)
ATGCAGTTCACTCTCACCAACGTTCTTGCCCTCACCCTCGCGGTCGCCAC
CGGCGTCTCTGCTGGCGCTGTCTCTGACTCCCAAGCCATTAAGACCCAGA
CTGAGGGCAAGTGCGATATTGGCAACGTCTCGTGCTGCAACCCAACCAAC
GAGGACAAGACTGATGGCTTCCTCAACAACCTGCTCGAGTGGGGTGTTAT
CGGCAGTCTGGTCAACGGTCAGGGATCCGCTTGCGCTCCGATCAGCCTCA
TTGATGAGCTTGGAATTCTGGCCCTCGTCAAGGATACCCCTGATGGACCG
GTCTGCGAAAATGTCATTGCTTGCTGCCCTGGTCAGGGTGCTCAGTGTGT
CGCCATCGGTGACGGCTCTGGCTCCGGCTCCGGCTACAGCGACTAAATGC
AGTTCACTCTCACCAACGTTCTTGCCCTCACCCTCGCGGTCGCCACCGGC
GTCTCTGCTGGCGCTGTCTCTGACTCCCAAGCCATTAAGACCCAGACTGA
GGGCAAGTGCGATATTGGCAACGTCTCGTGCTGCAACCCAACCAACGAGG
ACAAGACTGATGGCTTCCTCAACAACCTGCTCGAGTGGGGTGTTATCGGC
AGTCTGGTCAACGGTCAGGGATCCGCTTGCGCTCCGATCAGCCTCATTGA
TGAGCTTGGAATTCTGGCCCTCGTCAAGGATACCCCTGATGGACCGGTCT
GCGAAAATGTCATTGCTTGCTGCCCTGGTCAGGGTGCTCAGTGTGTCGCC
ATCGGTGACGGCTCTGGCTCCGGCTCCGGCTACAGCGACTAAATGCAGTT
CACTCTCACCAACGTTCTTGCCCTCACCCTCGCGGTCGCCACCGGCGTCT
CTGCTGGCGCTGTCTCTGACTCCCAAGCCATTAAGACCCAGACTGAGGGC
AAGTGCGATATTGGCAACGTCTCGTGCTGCAACCCAACCAACGAGGACAA
GACTGATGGCTTCCTCAACAACCTGCTCGAGTGGGGTGTTATCGGCAGTC
TGGTCAACGGTCAGGGATCCGCTTGCGCTCCGATCAGCCTCATTGATGAG
CTTGGAATTCTGGCCCTCGTCAAGGATACCCCTGATGGACCGGTCTGCGA
AAATGTCATTGCTTGCTGCCCTGGTCAGGGTGCTCAGTGTGTCGCCATCG
GTGACGGCTCTGGCTCCGGCTCCGGCTACAGCGACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0009277 | fungal-type cell wall |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005199 | structural constituent of cell wall |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-21) |
| DBxref | InterPro:IPR001338 |
| DBxref | PFAM:PF01185 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:514096..514666 + |
|
