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KJC3_007960-T1, KJC3_007960-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007960-T1
Unique NameKJC3_007960-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:542194..543216+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007960-T1 ID=KJC3_007960-T1|Name=KJC3_007960-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1023bp|location=Sequence derived from alignment at ch6:542194..543216+ (Aspergillus niger KJC3)
ATGTCTGACTCCCAGGTTGATCCCGACCAGTTCACCCGTGCGGGCTGTAT
AACGCAGAAATACTACCGCGACGTCTATTCCACCATCGATCCGTCACGGC
CAGAGTTGTCCCAGAAAGATAGAGTAACGATCGTCACAGGCGCAGGAAAG
GGAATTGGTCGAGTGAGAACAGGCCCAATTTCATTACAGACGCAGTCACG
ACTGACCTCCGTGATTACCCCAGGCTATCGCGCGAGCACACGCCCAGTCC
GGCGTCAAGGGGTTAGTCCTTGTGACTCAGTCTGCTCAGTCGGCTGAGGA
GACGAAAGCAGTTTTGCAAGCCGAATCCCCCTCTGTTGAAGTGCTGGCTC
TTCCCACGGACATCACCGATGAGAAGGCAGTAGCGCAGACCTTCGACACT
ATCAAAAACCACTTTGGCGTCGCTCACACCTTGATCAACAACGCCGGAGT
CTTTTCTTCGATAGCACCCGTTGCCCAATCGGACTCCAGCACCTGGTGGA
AAGACTTTGAGGTCAACGTACGGGGGACATACCTTGTGACTGCGGCATAC
CTGCGTCTGATCGCCTCTGAGAGCGCTGATTTTCGGCCCACCGTGGTCAA
CCTCATTTCCACAATTAGCCTCACGCCGCCTGGATTGAGCAGTTACTTCA
TCAGTAAACTGGCTGTGGCCAAATTCACCGAGTTCATTACAGCTGAGAAC
CTCCGGGTCGCCACCTACAGCCTCTCTCCGGGTATCGTACATACCAGCAT
GACGCTGGATTCATTTAAGCCATTTGCTAAAGACACTGGTATGTTCACGA
ACATCATCACTGGCAATTTCAGAGTCCTTAGGCTAATAATGACAACTTGC
TTTGGTCTGGAATAGCGGAACTCCCAGGTGCCGTTACGGTTTACTTGGCT
GTGAAACGTCCGCAATACCTCAATGGACGTCACCTATCCTCCAATTGGGA
TCTAGCAGAGCTTGAAGCTAAGGAAACGGAGTTGTCCTCGTCAGATACCC
TGAAATTAGGCCAGTTAATCTGA
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Coding sequence (CDS) from alignment at ch6:542194..543216+

>KJC3_007960-T1 ID=KJC3_007960-T1|Name=KJC3_007960-T1|organism=Aspergillus niger KJC3|type=CDS|length=2655bp|location=Sequence derived from alignment at ch6:542194..543216+ (Aspergillus niger KJC3)
ATGTCTGACTCCCAGGTTGATCCCGACCAGTTCACCCGTGCGGGCTGTAT
AACGCAGAAATACTACCGCGACGTCTATTCCACCATCGATCCGTCACGGC
CAGAGTTGTCCCAGAAAGATAGAGTAACGATCGTCACAGGCGCAGGAAAG
GGAATTGGTCGAGCTATCGCGCGAGCACACGCCCAGTCCGGCGTCAAGGG
GTTAGTCCTTGTGACTCAGTCTGCTCAGTCGGCTGAGGAGACGAAAGCAG
TTTTGCAAGCCGAATCCCCCTCTGTTGAAGTGCTGGCTCTTCCCACGGAC
ATCACCGATGAGAAGGCAGTAGCGCAGACCTTCGACACTATCAAAAACCA
CTTTGGCGTCGCTCACACCTTGATCAACAACGCCGGAGTCTTTTCTTCGA
TAGCACCCGTTGCCCAATCGGACTCCAGCACCTGGTGGAAAGACTTTGAG
GTCAACGTACGGGGGACATACCTTGTGACTGCGGCATACCTGCGTCTGAT
CGCCTCTGAGAGCGCTGATTTTCGGCCCACCGTGGTCAACCTCATTTCCA
CAATTAGCCTCACGCCGCCTGGATTGAGCAGTTACTTCATCAGTAAACTG
GCTGTGGCCAAATTCACCGAGTTCATTACAGCTGAGAACCTCCGGGTCGC
CACCTACAGCCTCTCTCCGGGTATCGTACATACCAGCATGACGCTGGATT
CATTTAAGCCATTTGCTAAAGACACTGCGGAACTCCCAGGTGCCGTTACG
GTTTACTTGGCTGTGAAACGTCCGCAATACCTCAATGGACGTCACCTATC
CTCCAATTGGGATCTAGCAGAGCTTGAAGCTAAGGAAACGGAGTTGTCCT
CGTCAGATACCCTGAAATTAGGCCAGTTAATCTGAATGTCTGACTCCCAG
GTTGATCCCGACCAGTTCACCCGTGCGGGCTGTATAACGCAGAAATACTA
CCGCGACGTCTATTCCACCATCGATCCGTCACGGCCAGAGTTGTCCCAGA
AAGATAGAGTAACGATCGTCACAGGCGCAGGAAAGGGAATTGGTCGAGCT
ATCGCGCGAGCACACGCCCAGTCCGGCGTCAAGGGGTTAGTCCTTGTGAC
TCAGTCTGCTCAGTCGGCTGAGGAGACGAAAGCAGTTTTGCAAGCCGAAT
CCCCCTCTGTTGAAGTGCTGGCTCTTCCCACGGACATCACCGATGAGAAG
GCAGTAGCGCAGACCTTCGACACTATCAAAAACCACTTTGGCGTCGCTCA
CACCTTGATCAACAACGCCGGAGTCTTTTCTTCGATAGCACCCGTTGCCC
AATCGGACTCCAGCACCTGGTGGAAAGACTTTGAGGTCAACGTACGGGGG
ACATACCTTGTGACTGCGGCATACCTGCGTCTGATCGCCTCTGAGAGCGC
TGATTTTCGGCCCACCGTGGTCAACCTCATTTCCACAATTAGCCTCACGC
CGCCTGGATTGAGCAGTTACTTCATCAGTAAACTGGCTGTGGCCAAATTC
ACCGAGTTCATTACAGCTGAGAACCTCCGGGTCGCCACCTACAGCCTCTC
TCCGGGTATCGTACATACCAGCATGACGCTGGATTCATTTAAGCCATTTG
CTAAAGACACTGCGGAACTCCCAGGTGCCGTTACGGTTTACTTGGCTGTG
AAACGTCCGCAATACCTCAATGGACGTCACCTATCCTCCAATTGGGATCT
AGCAGAGCTTGAAGCTAAGGAAACGGAGTTGTCCTCGTCAGATACCCTGA
AATTAGGCCAGTTAATCTGAATGTCTGACTCCCAGGTTGATCCCGACCAG
TTCACCCGTGCGGGCTGTATAACGCAGAAATACTACCGCGACGTCTATTC
CACCATCGATCCGTCACGGCCAGAGTTGTCCCAGAAAGATAGAGTAACGA
TCGTCACAGGCGCAGGAAAGGGAATTGGTCGAGCTATCGCGCGAGCACAC
GCCCAGTCCGGCGTCAAGGGGTTAGTCCTTGTGACTCAGTCTGCTCAGTC
GGCTGAGGAGACGAAAGCAGTTTTGCAAGCCGAATCCCCCTCTGTTGAAG
TGCTGGCTCTTCCCACGGACATCACCGATGAGAAGGCAGTAGCGCAGACC
TTCGACACTATCAAAAACCACTTTGGCGTCGCTCACACCTTGATCAACAA
CGCCGGAGTCTTTTCTTCGATAGCACCCGTTGCCCAATCGGACTCCAGCA
CCTGGTGGAAAGACTTTGAGGTCAACGTACGGGGGACATACCTTGTGACT
GCGGCATACCTGCGTCTGATCGCCTCTGAGAGCGCTGATTTTCGGCCCAC
CGTGGTCAACCTCATTTCCACAATTAGCCTCACGCCGCCTGGATTGAGCA
GTTACTTCATCAGTAAACTGGCTGTGGCCAAATTCACCGAGTTCATTACA
GCTGAGAACCTCCGGGTCGCCACCTACAGCCTCTCTCCGGGTATCGTACA
TACCAGCATGACGCTGGATTCATTTAAGCCATTTGCTAAAGACACTGCGG
AACTCCCAGGTGCCGTTACGGTTTACTTGGCTGTGAAACGTCCGCAATAC
CTCAATGGACGTCACCTATCCTCCAATTGGGATCTAGCAGAGCTTGAAGC
TAAGGAAACGGAGTTGTCCTCGTCAGATACCCTGAAATTAGGCCAGTTAA
TCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007960KJC3_007960Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007960-T1.exon1KJC3_007960-T1.exon1Aspergillus niger KJC3exon
KJC3_007960-T1.exon2KJC3_007960-T1.exon2Aspergillus niger KJC3exon
KJC3_007960-T1.exon3KJC3_007960-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007960-T1.cdsKJC3_007960-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007960-T1KJC3_007960-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:542194..543216 +
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