You are here

Home

KJC3_007980-T1, KJC3_007980-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007980-T1
Unique NameKJC3_007980-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:593651..595390-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007980-T1 ID=KJC3_007980-T1|Name=KJC3_007980-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1740bp|location=Sequence derived from alignment at ch6:593651..595390- (Aspergillus niger KJC3)
GATGGGAATGCATCCAAACCTAAATGGAAGAGAAAAAGAGTTCGCTGCAA
ACAACTGAAGTAGGCACATGACATCCCCCAACGTCATCCATCTACTCTCG
ACTAAGTACTTCGTACTTCTTCTACCAAAGAAGCAACACGCTGTTGTTGA
CCACAACACAGTCAATCCCAATGCAATAAATACCTGCTACTCCATGTAAA
GACACTAAAGGCTCCTCCCGCCAGCTGGCCCTGTGAATCCTCAAGCTACT
ACAGAGTACTAGACGACTAGTACTATCTATCTTCTCCAAGAAACAACGGT
CCTCGACAATCATTGGACCTCCGGATGCGGAGACTCCTACTATTGCAGTG
CCATCAACTGCTCCCAGTCCGACCTCGCCATCCCCCATCAGCTCTCTTCT
CTAAGCGCCGGCTCTCGACTGCGAACCAATTGTGCTGCTATCACCAAGCA
CACCACATGAGCTCCCCGACAAACCGGAAGGGCTCACTGCCCCATCAATT
GCGTACCGCTGCCGAACCCCGCCAGAACCGACTGTACAATGTCCGGCTGT
CGCATGTCGAACAGGCCAATCCTTTCGTGCGGCTACTACAGCTGACCATA
CCCCCGGAGGTCCAGAATGCCGAAGATGAAGGTCAGGAAGTGGAAGAAGT
ATGATATTTCTTTCCTTTTTGTTTTTTCTATATAATAATTCCAACCACAT
ACCTATAATTTTCATATTAACAGCAACATATCCGCTCCCCGACCAACCAC
ATCGTGCTAACACCCAACAGTTAGCCAATCCCCAACAACCTCTAACATTC
CTTCCGGGTCAATGGCTCGACGTTCATATCCCTTCTATCCCCAATGCAGG
CGGCTTCAGCATTACCTCCACTCCAGCCGACGCACAAGTCCTCCCATCCC
TAGAATCTCCCGCGGAGGCAATCACAACCGACGAAACCGACGTTCCACCC
ATCGACCCGCGCGGTCGGCCACCCTACGTAGAGTTAGCTGTGCAATATGC
GCCCTCCAACCCAGCCAGCGCATGGCTCTGGCGACCGGCGGATGAGATCC
TTGGCACGGAACTTAGTATCCGCGTCGGAGGGAGTTTTGTATGGCCTCCG
TCTTCAAACGTGGACTTAACGAAAGTTCGGAATGTAGTTTTCGTGGCAGG
CGGGGTAGGGATCAAGTGAGTGTGATGTCGATTCATAAACAGGAAAGAGA
ATTCGTAGCTAACTACTAACACAACCACAGCCCACTAATGTCCATGCTAT
CGCATCTGAACAATGGCGACGAGATAGCTCTCCCTCACCCGTCATTCAAT
ATTCGATTTCTGTACTCAACGAAACTCCCACGGAAAGAAGAAGGAACAGT
AACCGGGAGTGGTGGTGGTGGCAGTAATAGTCTGGAGCAAATATTGTTCC
TTTCACGTCTACGACAGATCATTGCGTCGCAGTCACAAATTTGTCGATTG
CAGATTAGTTTAGACCTTTTCATCACCGATCCTGGTTTGGATCAAAGTTC
TCTTACTGGTTCTGCGGAATCTGATGATCTGACCCTGCATATGAGGAGGA
TTAATCGGGATGATTTACGCAAGGCGATCAGTAATCCTGATGGTAGTATT
GAGGCGGCAGAGACTGTGTGTTATGTGTGTGGTCCGCCTGGGATGACTGA
TGATGTGGTCGGCAACCTTGAGGGCTTTCTTGGGGATAAGGAGCGCGTGT
ATTATGAAAAGTGGTGGTAATAGAGTAGGTTTGAAAGAAG
back to top

Coding sequence (CDS) from alignment at ch6:593651..595390-

>KJC3_007980-T1 ID=KJC3_007980-T1|Name=KJC3_007980-T1|organism=Aspergillus niger KJC3|type=CDS|length=3627bp|location=Sequence derived from alignment at ch6:593651..595390- (Aspergillus niger KJC3)
CCCACTAATGTCCATGCTATCGCATCTGAACAATGGCGACGAGATAGCTC
TCCCTCACCCGTCATTCAATATTCGATTTCTGTACTCAACGAAACTCCCA
CGGAAAGAAGAAGGAACAGTAACCGGGAGTGGTGGTGGTGGCAGTAATAG
TCTGGAGCAAATATTGTTCCTTTCACGTCTACGACAGATCATTGCGTCGC
AGTCACAAATTTGTCGATTGCAGATTAGTTTAGACCTTTTCATCACCGAT
CCTGGTTTGGATCAAAGTTCTCTTACTGGTTCTGCGGAATCTGATGATCT
GACCCTGCATATGAGGAGGATTAATCGGGATGATTTACGCAAGGCGATCA
GTAATCCTGATGGTAGTATTGAGGCGGCAGAGACTGTGTGTTATGTGTGT
GGTCCGCCTGGGATGACTGATGATGTGGTCGGCAACCTTGAGGGCTTTCT
TGGGGATAAGGAGCGCGTGTATTATGAAAAGTGGTGGTAATTAGCCAATC
CCCAACAACCTCTAACATTCCTTCCGGGTCAATGGCTCGACGTTCATATC
CCTTCTATCCCCAATGCAGGCGGCTTCAGCATTACCTCCACTCCAGCCGA
CGCACAAGTCCTCCCATCCCTAGAATCTCCCGCGGAGGCAATCACAACCG
ACGAAACCGACGTTCCACCCATCGACCCGCGCGGTCGGCCACCCTACGTA
GAGTTAGCTGTGCAATATGCGCCCTCCAACCCAGCCAGCGCATGGCTCTG
GCGACCGGCGGATGAGATCCTTGGCACGGAACTTAGTATCCGCGTCGGAG
GGAGTTTTGTATGGCCTCCGTCTTCAAACGTGGACTTAACGAAAGTTCGG
AATGTAGTTTTCGTGGCAGGCGGGGTAGGGATCAAATGCGGAGACTCCTA
CTATTGCAGTGCCATCAACTGCTCCCAGTCCGACCTCGCCATCCCCCATC
AGCTCTCTTCTCTAAGCGCCGGCTCTCGACTGCGAACCAATTGTGCTGCT
ATCACCAAGCACACCACATGAGCTCCCCGACAAACCGGAAGGGCTCACTG
CCCCATCAATTGCGTACCGCTGCCGAACCCCGCCAGAACCGACTGTACAA
TGTCCGGCTGTCGCATGTCGAACAGGCCAATCCTTTCGTGCGGCTACTAC
AGCTGACCATACCCCCGGAGGTCCAGAATGCCGAAGATGAAGGTCAGGAA
GTGGAAGAACCCACTAATGTCCATGCTATCGCATCTGAACAATGGCGACG
AGATAGCTCTCCCTCACCCGTCATTCAATATTCGATTTCTGTACTCAACG
AAACTCCCACGGAAAGAAGAAGGAACAGTAACCGGGAGTGGTGGTGGTGG
CAGTAATAGTCTGGAGCAAATATTGTTCCTTTCACGTCTACGACAGATCA
TTGCGTCGCAGTCACAAATTTGTCGATTGCAGATTAGTTTAGACCTTTTC
ATCACCGATCCTGGTTTGGATCAAAGTTCTCTTACTGGTTCTGCGGAATC
TGATGATCTGACCCTGCATATGAGGAGGATTAATCGGGATGATTTACGCA
AGGCGATCAGTAATCCTGATGGTAGTATTGAGGCGGCAGAGACTGTGTGT
TATGTGTGTGGTCCGCCTGGGATGACTGATGATGTGGTCGGCAACCTTGA
GGGCTTTCTTGGGGATAAGGAGCGCGTGTATTATGAAAAGTGGTGGTAAT
TAGCCAATCCCCAACAACCTCTAACATTCCTTCCGGGTCAATGGCTCGAC
GTTCATATCCCTTCTATCCCCAATGCAGGCGGCTTCAGCATTACCTCCAC
TCCAGCCGACGCACAAGTCCTCCCATCCCTAGAATCTCCCGCGGAGGCAA
TCACAACCGACGAAACCGACGTTCCACCCATCGACCCGCGCGGTCGGCCA
CCCTACGTAGAGTTAGCTGTGCAATATGCGCCCTCCAACCCAGCCAGCGC
ATGGCTCTGGCGACCGGCGGATGAGATCCTTGGCACGGAACTTAGTATCC
GCGTCGGAGGGAGTTTTGTATGGCCTCCGTCTTCAAACGTGGACTTAACG
AAAGTTCGGAATGTAGTTTTCGTGGCAGGCGGGGTAGGGATCAAATGCGG
AGACTCCTACTATTGCAGTGCCATCAACTGCTCCCAGTCCGACCTCGCCA
TCCCCCATCAGCTCTCTTCTCTAAGCGCCGGCTCTCGACTGCGAACCAAT
TGTGCTGCTATCACCAAGCACACCACATGAGCTCCCCGACAAACCGGAAG
GGCTCACTGCCCCATCAATTGCGTACCGCTGCCGAACCCCGCCAGAACCG
ACTGTACAATGTCCGGCTGTCGCATGTCGAACAGGCCAATCCTTTCGTGC
GGCTACTACAGCTGACCATACCCCCGGAGGTCCAGAATGCCGAAGATGAA
GGTCAGGAAGTGGAAGAACCCACTAATGTCCATGCTATCGCATCTGAACA
ATGGCGACGAGATAGCTCTCCCTCACCCGTCATTCAATATTCGATTTCTG
TACTCAACGAAACTCCCACGGAAAGAAGAAGGAACAGTAACCGGGAGTGG
TGGTGGTGGCAGTAATAGTCTGGAGCAAATATTGTTCCTTTCACGTCTAC
GACAGATCATTGCGTCGCAGTCACAAATTTGTCGATTGCAGATTAGTTTA
GACCTTTTCATCACCGATCCTGGTTTGGATCAAAGTTCTCTTACTGGTTC
TGCGGAATCTGATGATCTGACCCTGCATATGAGGAGGATTAATCGGGATG
ATTTACGCAAGGCGATCAGTAATCCTGATGGTAGTATTGAGGCGGCAGAG
ACTGTGTGTTATGTGTGTGGTCCGCCTGGGATGACTGATGATGTGGTCGG
CAACCTTGAGGGCTTTCTTGGGGATAAGGAGCGCGTGTATTATGAAAAGT
GGTGGTAATTAGCCAATCCCCAACAACCTCTAACATTCCTTCCGGGTCAA
TGGCTCGACGTTCATATCCCTTCTATCCCCAATGCAGGCGGCTTCAGCAT
TACCTCCACTCCAGCCGACGCACAAGTCCTCCCATCCCTAGAATCTCCCG
CGGAGGCAATCACAACCGACGAAACCGACGTTCCACCCATCGACCCGCGC
GGTCGGCCACCCTACGTAGAGTTAGCTGTGCAATATGCGCCCTCCAACCC
AGCCAGCGCATGGCTCTGGCGACCGGCGGATGAGATCCTTGGCACGGAAC
TTAGTATCCGCGTCGGAGGGAGTTTTGTATGGCCTCCGTCTTCAAACGTG
GACTTAACGAAAGTTCGGAATGTAGTTTTCGTGGCAGGCGGGGTAGGGAT
CAAATGCGGAGACTCCTACTATTGCAGTGCCATCAACTGCTCCCAGTCCG
ACCTCGCCATCCCCCATCAGCTCTCTTCTCTAAGCGCCGGCTCTCGACTG
CGAACCAATTGTGCTGCTATCACCAAGCACACCACATGAGCTCCCCGACA
AACCGGAAGGGCTCACTGCCCCATCAATTGCGTACCGCTGCCGAACCCCG
CCAGAACCGACTGTACAATGTCCGGCTGTCGCATGTCGAACAGGCCAATC
CTTTCGTGCGGCTACTACAGCTGACCATACCCCCGGAGGTCCAGAATGCC
GAAGATGAAGGTCAGGAAGTGGAAGAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007980KJC3_007980Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007980-T1KJC3_007980-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007980-T1.cdsKJC3_007980-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007980-T1.utr3p1KJC3_007980-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007980-T1.exon4KJC3_007980-T1.exon4Aspergillus niger KJC3exon
KJC3_007980-T1.exon3KJC3_007980-T1.exon3Aspergillus niger KJC3exon
KJC3_007980-T1.exon2KJC3_007980-T1.exon2Aspergillus niger KJC3exon
KJC3_007980-T1.exon1KJC3_007980-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007980-T1.utr5p2KJC3_007980-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_007980-T1.utr5p1KJC3_007980-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR017927
DBxrefInterPro:IPR039261
DBxrefInterPro:IPR000951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:593651..595390 -
Powered by Drupal