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KJC3_007988-T1, KJC3_007988-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007988-T1
Unique NameKJC3_007988-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:609808..610978-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007988-T1 ID=KJC3_007988-T1|Name=KJC3_007988-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1171bp|location=Sequence derived from alignment at ch6:609808..610978- (Aspergillus niger KJC3)
ATGATACTTCAATCATCTTCTCGAGGATCCTGCCTCCAATGGCTCACATC
CCATTTTAACCGGCGTCGATTTCAGCTCTCGTTCGCTCTTGCCATTGTTC
TTCTCCTGTCCTACCTCTTCCATCTTGATGTTCTCCCAACGAACTATGAG
ACACCCTTCAAAGACCACTATGCTCGCACCCTTTCAGCACGAGACCTTCT
CGCCCGTCCGCTCTCTCAAGACCTTACCACCATCCCTAAGCTTATCCATC
AGACGTGGTTTCCTGCCGGTAGCAATATGAGCGACGATGCCCAAACCTGG
GTACGGACAATGCGCTCTCAAAATGCAGATTGGGAGTATGTACTCTGGGA
TGACGAGACGAATCGGATGCTCGTCGAACAGTACTTCCCTTGGTTCCTGA
CGGATTACAATCGTCTCCCCAAGGAGATCCATCGAGCAGATGTGGTGCGC
AACCTCTACATGTATCTATTCGGAGGGTAGGTCACCACCGCAACTATAAC
CCTCGCGTTAGCTGACAACAATGATCTACAGAATGTACGCCGACGTCGAC
ACAGAAGCTCTCCGACCCGTTGAGCCCCTCTTCACCAGCCATTTTACCAC
CCTCGCCAGGCACAATCAGATCCTCTCCTCAGGGCCGCGCAAGATCGACC
ATGACTGCACGCAGCGCGGATTTGTCGGCCACATGGCACACAAAGAAGGA
CTGGATGGCCCCGCCGCCGTCCCGAATGGCTGGATGGCATCACCCCCCGG
TCACCCTTTTTGGCTCCTGCCTGTGATCCACGTGATTGAGAACCCCAACG
GGAATGGCGATGGATCTGTCGAGTCACTCACAGGGCCTGGGGCACTCGGT
ACTATGCTACACAAGTATTACGAGGACTTTAAGGATAGCTCTGTGCGGAC
GCATGTGTGTCGAACGGTGCGGCGGTGGTCACCTGCGTGGGATTTGTACT
GTGGACCGGAGGGCAGTGAGGAAGAGGTTGGGGCAAAAGTTGATAAGATG
GTGGTGCTACCGCGACAGCAGATCTATCCGTATAGCTGGGCGGATGATAA
GCATCCGGCATGTCTGGCAGCATGGGGAAACCCGGACTTCAATCCGGATG
AGTGTAAGCGGTGGATTGATGTGGATGAGTGGCCGAGTTATTTCATTACA
TATTGTACGCATTCGTGGTGA
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Coding sequence (CDS) from alignment at ch6:609808..610978-

>KJC3_007988-T1 ID=KJC3_007988-T1|Name=KJC3_007988-T1|organism=Aspergillus niger KJC3|type=CDS|length=2232bp|location=Sequence derived from alignment at ch6:609808..610978- (Aspergillus niger KJC3)
AATGTACGCCGACGTCGACACAGAAGCTCTCCGACCCGTTGAGCCCCTCT
TCACCAGCCATTTTACCACCCTCGCCAGGCACAATCAGATCCTCTCCTCA
GGGCCGCGCAAGATCGACCATGACTGCACGCAGCGCGGATTTGTCGGCCA
CATGGCACACAAAGAAGGACTGGATGGCCCCGCCGCCGTCCCGAATGGCT
GGATGGCATCACCCCCCGGTCACCCTTTTTGGCTCCTGCCTGTGATCCAC
GTGATTGAGAACCCCAACGGGAATGGCGATGGATCTGTCGAGTCACTCAC
AGGGCCTGGGGCACTCGGTACTATGCTACACAAGTATTACGAGGACTTTA
AGGATAGCTCTGTGCGGACGCATGTGTGTCGAACGGTGCGGCGGTGGTCA
CCTGCGTGGGATTTGTACTGTGGACCGGAGGGCAGTGAGGAAGAGGTTGG
GGCAAAAGTTGATAAGATGGTGGTGCTACCGCGACAGCAGATCTATCCGT
ATAGCTGGGCGGATGATAAGCATCCGGCATGTCTGGCAGCATGGGGAAAC
CCGGACTTCAATCCGGATGAGTGTAAGCGGTGGATTGATGTGGATGAGTG
GCCGAGTTATTTCATTACATATTGTACGCATTCGTGGTGAATGATACTTC
AATCATCTTCTCGAGGATCCTGCCTCCAATGGCTCACATCCCATTTTAAC
CGGCGTCGATTTCAGCTCTCGTTCGCTCTTGCCATTGTTCTTCTCCTGTC
CTACCTCTTCCATCTTGATGTTCTCCCAACGAACTATGAGACACCCTTCA
AAGACCACTATGCTCGCACCCTTTCAGCACGAGACCTTCTCGCCCGTCCG
CTCTCTCAAGACCTTACCACCATCCCTAAGCTTATCCATCAGACGTGGTT
TCCTGCCGGTAGCAATATGAGCGACGATGCCCAAACCTGGGTACGGACAA
TGCGCTCTCAAAATGCAGATTGGGAGTATGTACTCTGGGATGACGAGACG
AATCGGATGCTCGTCGAACAGTACTTCCCTTGGTTCCTGACGGATTACAA
TCGTCTCCCCAAGGAGATCCATCGAGCAGATGTGGTGCGCAACCTCTACA
TGTATCTATTCGGAGGAATGTACGCCGACGTCGACACAGAAGCTCTCCGA
CCCGTTGAGCCCCTCTTCACCAGCCATTTTACCACCCTCGCCAGGCACAA
TCAGATCCTCTCCTCAGGGCCGCGCAAGATCGACCATGACTGCACGCAGC
GCGGATTTGTCGGCCACATGGCACACAAAGAAGGACTGGATGGCCCCGCC
GCCGTCCCGAATGGCTGGATGGCATCACCCCCCGGTCACCCTTTTTGGCT
CCTGCCTGTGATCCACGTGATTGAGAACCCCAACGGGAATGGCGATGGAT
CTGTCGAGTCACTCACAGGGCCTGGGGCACTCGGTACTATGCTACACAAG
TATTACGAGGACTTTAAGGATAGCTCTGTGCGGACGCATGTGTGTCGAAC
GGTGCGGCGGTGGTCACCTGCGTGGGATTTGTACTGTGGACCGGAGGGCA
GTGAGGAAGAGGTTGGGGCAAAAGTTGATAAGATGGTGGTGCTACCGCGA
CAGCAGATCTATCCGTATAGCTGGGCGGATGATAAGCATCCGGCATGTCT
GGCAGCATGGGGAAACCCGGACTTCAATCCGGATGAGTGTAAGCGGTGGA
TTGATGTGGATGAGTGGCCGAGTTATTTCATTACATATTGTACGCATTCG
TGGTGAATGATACTTCAATCATCTTCTCGAGGATCCTGCCTCCAATGGCT
CACATCCCATTTTAACCGGCGTCGATTTCAGCTCTCGTTCGCTCTTGCCA
TTGTTCTTCTCCTGTCCTACCTCTTCCATCTTGATGTTCTCCCAACGAAC
TATGAGACACCCTTCAAAGACCACTATGCTCGCACCCTTTCAGCACGAGA
CCTTCTCGCCCGTCCGCTCTCTCAAGACCTTACCACCATCCCTAAGCTTA
TCCATCAGACGTGGTTTCCTGCCGGTAGCAATATGAGCGACGATGCCCAA
ACCTGGGTACGGACAATGCGCTCTCAAAATGCAGATTGGGAGTATGTACT
CTGGGATGACGAGACGAATCGGATGCTCGTCGAACAGTACTTCCCTTGGT
TCCTGACGGATTACAATCGTCTCCCCAAGGAGATCCATCGAGCAGATGTG
GTGCGCAACCTCTACATGTATCTATTCGGAGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007988KJC3_007988Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007988-T1KJC3_007988-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007988-T1.cdsKJC3_007988-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007988-T1.exon2KJC3_007988-T1.exon2Aspergillus niger KJC3exon
KJC3_007988-T1.exon1KJC3_007988-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteCAZy:GT32
DBxrefInterPro:IPR029044
DBxrefInterPro:IPR007577
DBxrefPFAM:PF04488
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:609808..610978 -
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