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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:613775..615080- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007990-T1 ID=KJC3_007990-T1|Name=KJC3_007990-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1306bp|location=Sequence derived from alignment at ch6:613775..615080- (Aspergillus niger KJC3)
ATGATTCGGGGGAAATCTAGGTTTACGAAATACATTGTCGCTGCATTCGC
CAGTTATATTATTCTCACACTTCTATTCAGTGGCACTGGGGGAAAGTATT
GGAAACAGGACTGGGTGAGAATCGCGCGGTCCACGCTTGAGGATCGGGCG
CTGGAGCATATTCAGAATGAGACGCTTGGGGTTTGTTCTTATTCATATTT
TTCGATGATGCCCGTTACGTTCTGCTAATAGTCTTCGACAGTTTGAACAC
ATATATGCCATTGGGCTGAAAGAACGAACCGATAAGCGCGATTTCCTTAA
CCTCGCTGCGTCAATAGCCGGGTTTCGGGTTGAATGGATAGATGGGGTAC
ATCCAGAGGACATGAGCGAGAAGGCTCTGCTCAACGTATGCTGCTTTGTG
CCTAGGACTTTGCGCCTAAGTAACACCGGTTTTAGGATAACTTATTAGCA
CCATCCGAGATTGGATGCTGGCGCGCTCATATGAACGCTTTGAGCAAGTC
AGTCTGCTCCTTTGTCAATGCGGCAACCCTACTGATATAAGCTGACATTC
TCACGATATAGTATGGTCCAAAACTCCTACTCGACTGCGCTTATCCTTGA
AGACGACGCAGACTGGGACGTTAACATTAGGCAGCAACTCCGCGAATTTG
CCCGAGGCGTGCGCGCGTTAACCAGAAATGCTAATACGACCAAGAGCGCT
CCCTACGGCACCAACTGGGACATCCTCTGGGTGGGAGGATGCGCTTCATC
TGCCGCTCCCAACGAGACTCAATTCTATGCCATCCCACATGACCCAACTG
CCCCCAGTGTTGATCACCGTGGTACATGGGGCGGCCCCCTCGACTCATGG
AAAGAGAATTACCCTGAGACATCGACTCGTTTCATTTATCGGGCCGATAT
GGGCTGCTGCACCTATGGGTACGCGGTGACAAAGCGAGGCGCGGAGAGAA
TCCTAGCAGCCTTAGCGGTCGACCGACTCGTGGCTGCAGTGGATAACTCC
ATGGCTGATATGTGTGGTGGTAAGGATGGCCGTTCGCAGATTGAGTGTTA
TGCGCCGTTTCCCAACATTATCGGGACGTACAAGGCGGCCGGTCTTGCTT
CGAAGGATTCGGACATCCGTGAAGGCAGCGACGAATGGCACGAGGCACAG
GCCTGGAATCTCATGTACAGCACCCGATTGAATATTCATCGACTGGTGGC
TGGTAGGGATACCGTATATGCGCAGTATGATGAGGGTTTTCCTTGGTCGC
GGCGCGTGTTGAATTGGAAGGAGTTCGAGTACCCCAGGGGTTATCTAGTT
TCTTGA back to topCoding sequence (CDS) from alignment at ch6:613775..615080- >KJC3_007990-T1 ID=KJC3_007990-T1|Name=KJC3_007990-T1|organism=Aspergillus niger KJC3|type=CDS|length=4524bp|location=Sequence derived from alignment at ch6:613775..615080- (Aspergillus niger KJC3)
TATGGTCCAAAACTCCTACTCGACTGCGCTTATCCTTGAAGACGACGCAG
ACTGGGACGTTAACATTAGGCAGCAACTCCGCGAATTTGCCCGAGGCGTG
CGCGCGTTAACCAGAAATGCTAATACGACCAAGAGCGCTCCCTACGGCAC
CAACTGGGACATCCTCTGGGTGGGAGGATGCGCTTCATCTGCCGCTCCCA
ACGAGACTCAATTCTATGCCATCCCACATGACCCAACTGCCCCCAGTGTT
GATCACCGTGGTACATGGGGCGGCCCCCTCGACTCATGGAAAGAGAATTA
CCCTGAGACATCGACTCGTTTCATTTATCGGGCCGATATGGGCTGCTGCA
CCTATGGGTACGCGGTGACAAAGCGAGGCGCGGAGAGAATCCTAGCAGCC
TTAGCGGTCGACCGACTCGTGGCTGCAGTGGATAACTCCATGGCTGATAT
GTGTGGTGGTAAGGATGGCCGTTCGCAGATTGAGTGTTATGCGCCGTTTC
CCAACATTATCGGGACGTACAAGGCGGCCGGTCTTGCTTCGAAGGATTCG
GACATCCGTGAAGGCAGCGACGAATGGCACGAGGCACAGGCCTGGAATCT
CATGTACAGCACCCGATTGAATATTCATCGACTGGTGGCTGGTAGGGATA
CCGTATATGCGCAGTATGATGAGGGTTTTCCTTGGTCGCGGCGCGTGTTG
AATTGGAAGGAGTTCGAGTACCCCAGGGGTTATCTAGTTTCTTGAGATAA
CTTATTAGCACCATCCGAGATTGGATGCTGGCGCGCTCATATGAACGCTT
TGAGCAATTTGAACACATATATGCCATTGGGCTGAAAGAACGAACCGATA
AGCGCGATTTCCTTAACCTCGCTGCGTCAATAGCCGGGTTTCGGGTTGAA
TGGATAGATGGGGTACATCCAGAGGACATGAGCGAGAAGGCTCTGCTCAA
CATGATTCGGGGGAAATCTAGGTTTACGAAATACATTGTCGCTGCATTCG
CCAGTTATATTATTCTCACACTTCTATTCAGTGGCACTGGGGGAAAGTAT
TGGAAACAGGACTGGGTGAGAATCGCGCGGTCCACGCTTGAGGATCGGGC
GCTGGAGCATATTCAGAATGAGACGCTTGGGTATGGTCCAAAACTCCTAC
TCGACTGCGCTTATCCTTGAAGACGACGCAGACTGGGACGTTAACATTAG
GCAGCAACTCCGCGAATTTGCCCGAGGCGTGCGCGCGTTAACCAGAAATG
CTAATACGACCAAGAGCGCTCCCTACGGCACCAACTGGGACATCCTCTGG
GTGGGAGGATGCGCTTCATCTGCCGCTCCCAACGAGACTCAATTCTATGC
CATCCCACATGACCCAACTGCCCCCAGTGTTGATCACCGTGGTACATGGG
GCGGCCCCCTCGACTCATGGAAAGAGAATTACCCTGAGACATCGACTCGT
TTCATTTATCGGGCCGATATGGGCTGCTGCACCTATGGGTACGCGGTGAC
AAAGCGAGGCGCGGAGAGAATCCTAGCAGCCTTAGCGGTCGACCGACTCG
TGGCTGCAGTGGATAACTCCATGGCTGATATGTGTGGTGGTAAGGATGGC
CGTTCGCAGATTGAGTGTTATGCGCCGTTTCCCAACATTATCGGGACGTA
CAAGGCGGCCGGTCTTGCTTCGAAGGATTCGGACATCCGTGAAGGCAGCG
ACGAATGGCACGAGGCACAGGCCTGGAATCTCATGTACAGCACCCGATTG
AATATTCATCGACTGGTGGCTGGTAGGGATACCGTATATGCGCAGTATGA
TGAGGGTTTTCCTTGGTCGCGGCGCGTGTTGAATTGGAAGGAGTTCGAGT
ACCCCAGGGGTTATCTAGTTTCTTGAGATAACTTATTAGCACCATCCGAG
ATTGGATGCTGGCGCGCTCATATGAACGCTTTGAGCAATTTGAACACATA
TATGCCATTGGGCTGAAAGAACGAACCGATAAGCGCGATTTCCTTAACCT
CGCTGCGTCAATAGCCGGGTTTCGGGTTGAATGGATAGATGGGGTACATC
CAGAGGACATGAGCGAGAAGGCTCTGCTCAACATGATTCGGGGGAAATCT
AGGTTTACGAAATACATTGTCGCTGCATTCGCCAGTTATATTATTCTCAC
ACTTCTATTCAGTGGCACTGGGGGAAAGTATTGGAAACAGGACTGGGTGA
GAATCGCGCGGTCCACGCTTGAGGATCGGGCGCTGGAGCATATTCAGAAT
GAGACGCTTGGGTATGGTCCAAAACTCCTACTCGACTGCGCTTATCCTTG
AAGACGACGCAGACTGGGACGTTAACATTAGGCAGCAACTCCGCGAATTT
GCCCGAGGCGTGCGCGCGTTAACCAGAAATGCTAATACGACCAAGAGCGC
TCCCTACGGCACCAACTGGGACATCCTCTGGGTGGGAGGATGCGCTTCAT
CTGCCGCTCCCAACGAGACTCAATTCTATGCCATCCCACATGACCCAACT
GCCCCCAGTGTTGATCACCGTGGTACATGGGGCGGCCCCCTCGACTCATG
GAAAGAGAATTACCCTGAGACATCGACTCGTTTCATTTATCGGGCCGATA
TGGGCTGCTGCACCTATGGGTACGCGGTGACAAAGCGAGGCGCGGAGAGA
ATCCTAGCAGCCTTAGCGGTCGACCGACTCGTGGCTGCAGTGGATAACTC
CATGGCTGATATGTGTGGTGGTAAGGATGGCCGTTCGCAGATTGAGTGTT
ATGCGCCGTTTCCCAACATTATCGGGACGTACAAGGCGGCCGGTCTTGCT
TCGAAGGATTCGGACATCCGTGAAGGCAGCGACGAATGGCACGAGGCACA
GGCCTGGAATCTCATGTACAGCACCCGATTGAATATTCATCGACTGGTGG
CTGGTAGGGATACCGTATATGCGCAGTATGATGAGGGTTTTCCTTGGTCG
CGGCGCGTGTTGAATTGGAAGGAGTTCGAGTACCCCAGGGGTTATCTAGT
TTCTTGAGATAACTTATTAGCACCATCCGAGATTGGATGCTGGCGCGCTC
ATATGAACGCTTTGAGCAATTTGAACACATATATGCCATTGGGCTGAAAG
AACGAACCGATAAGCGCGATTTCCTTAACCTCGCTGCGTCAATAGCCGGG
TTTCGGGTTGAATGGATAGATGGGGTACATCCAGAGGACATGAGCGAGAA
GGCTCTGCTCAACATGATTCGGGGGAAATCTAGGTTTACGAAATACATTG
TCGCTGCATTCGCCAGTTATATTATTCTCACACTTCTATTCAGTGGCACT
GGGGGAAAGTATTGGAAACAGGACTGGGTGAGAATCGCGCGGTCCACGCT
TGAGGATCGGGCGCTGGAGCATATTCAGAATGAGACGCTTGGGTATGGTC
CAAAACTCCTACTCGACTGCGCTTATCCTTGAAGACGACGCAGACTGGGA
CGTTAACATTAGGCAGCAACTCCGCGAATTTGCCCGAGGCGTGCGCGCGT
TAACCAGAAATGCTAATACGACCAAGAGCGCTCCCTACGGCACCAACTGG
GACATCCTCTGGGTGGGAGGATGCGCTTCATCTGCCGCTCCCAACGAGAC
TCAATTCTATGCCATCCCACATGACCCAACTGCCCCCAGTGTTGATCACC
GTGGTACATGGGGCGGCCCCCTCGACTCATGGAAAGAGAATTACCCTGAG
ACATCGACTCGTTTCATTTATCGGGCCGATATGGGCTGCTGCACCTATGG
GTACGCGGTGACAAAGCGAGGCGCGGAGAGAATCCTAGCAGCCTTAGCGG
TCGACCGACTCGTGGCTGCAGTGGATAACTCCATGGCTGATATGTGTGGT
GGTAAGGATGGCCGTTCGCAGATTGAGTGTTATGCGCCGTTTCCCAACAT
TATCGGGACGTACAAGGCGGCCGGTCTTGCTTCGAAGGATTCGGACATCC
GTGAAGGCAGCGACGAATGGCACGAGGCACAGGCCTGGAATCTCATGTAC
AGCACCCGATTGAATATTCATCGACTGGTGGCTGGTAGGGATACCGTATA
TGCGCAGTATGATGAGGGTTTTCCTTGGTCGCGGCGCGTGTTGAATTGGA
AGGAGTTCGAGTACCCCAGGGGTTATCTAGTTTCTTGAGATAACTTATTA
GCACCATCCGAGATTGGATGCTGGCGCGCTCATATGAACGCTTTGAGCAA
TTTGAACACATATATGCCATTGGGCTGAAAGAACGAACCGATAAGCGCGA
TTTCCTTAACCTCGCTGCGTCAATAGCCGGGTTTCGGGTTGAATGGATAG
ATGGGGTACATCCAGAGGACATGAGCGAGAAGGCTCTGCTCAACATGATT
CGGGGGAAATCTAGGTTTACGAAATACATTGTCGCTGCATTCGCCAGTTA
TATTATTCTCACACTTCTATTCAGTGGCACTGGGGGAAAGTATTGGAAAC
AGGACTGGGTGAGAATCGCGCGGTCCACGCTTGAGGATCGGGCGCTGGAG
CATATTCAGAATGAGACGCTTGGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT25 |
| DBxref | InterPro:IPR002654 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:613775..615080 - |
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