|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:635627..636667- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007998-T1 ID=KJC3_007998-T1|Name=KJC3_007998-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1041bp|location=Sequence derived from alignment at ch6:635627..636667- (Aspergillus niger KJC3)
ATGTCGTGGCCTATGTGCGAGCGCGTGGTGTGCGGGTCATCCCAGAGATC
GATATGCCCAGCCATTCTGCTTCTGGGTGGAAGCAGGTCGACCCCCAGAT
GGCGACCTGCGTGGACTCCTGGTGGTCCAAACGATTATGCCCTGCATACC
GCGGTGGAGCCTCCGCCCGGCCAGATGGACATTATTTACAACGGCACGTA
CGATGTGGTCCGACCGGTCTACAACGAGCTGTCCAACATCTTCCCAGACA
ACTGGTCCCATGTGGGGGCGGATGAAATCCAGCCTAATTGTTTTAACTTC
AGCAGCTATGTTACCGACTGGTTTGCGCAGGATCCGTCGCGCACCTATAA
TGACCTGGCCCAATACTGGGTCGACCATGCCGTGCCGATTTTCCAGAACC
ACAGTGCCTCGCGGCGACTAGTCATGTGGGAAGATATTGTACTGTCAACA
GAGCATGCGTATGATGTCCCTACGAACATCGTCATGCAGACCTGGAACAG
CGGGCTGGACTACATCAACCAGCTGACCGCCAAGGGCTACGACGTTATTG
TATCATCGGCGGATTTTATGTATTTGGACTGCGGGATGGGGGGCTTCCTA
ACGAATGATCCTCGCTACGATGTAATGAGTAATCCTGATGCAAGCACAGC
AAACTTCAACTACGGCGGCAACGGGGGCTCGTGGTGTGCGCCGTACAAGA
CATGGCAGCGCATCTACGACTACGACTTCACGCAGAACCTTACTGTTACT
CAGGCCCAGCACATTGTAGGAGCAGAGGCGCCGCTCTGGTCAGAGCAAGT
GGATGATGTAACGGTATCCAGTCAATTTTGGCCGCGTGCCGCTGCGCTGG
CGGAGCTGGTGTGGTCTGGGAATCGTGATGAGAACGGGCGGAAACGCACG
ACGCTGATGACCCAGCGCATCCTGAACTTCCGCGAGTATCTGGTGGCCAA
CGGGGTTCAAGCGCAAGCGTTGGTTCCTAAGTACTGTGTGCAGCGTCCGC
ATACCTGCGACTTGTATCTAAACCAGAGTGCGATTCAGTAA back to topCoding sequence (CDS) from alignment at ch6:635627..636667- >KJC3_007998-T1 ID=KJC3_007998-T1|Name=KJC3_007998-T1|organism=Aspergillus niger KJC3|type=CDS|length=1041bp|location=Sequence derived from alignment at ch6:635627..636667- (Aspergillus niger KJC3)
ATGTCGTGGCCTATGTGCGAGCGCGTGGTGTGCGGGTCATCCCAGAGATC
GATATGCCCAGCCATTCTGCTTCTGGGTGGAAGCAGGTCGACCCCCAGAT
GGCGACCTGCGTGGACTCCTGGTGGTCCAAACGATTATGCCCTGCATACC
GCGGTGGAGCCTCCGCCCGGCCAGATGGACATTATTTACAACGGCACGTA
CGATGTGGTCCGACCGGTCTACAACGAGCTGTCCAACATCTTCCCAGACA
ACTGGTCCCATGTGGGGGCGGATGAAATCCAGCCTAATTGTTTTAACTTC
AGCAGCTATGTTACCGACTGGTTTGCGCAGGATCCGTCGCGCACCTATAA
TGACCTGGCCCAATACTGGGTCGACCATGCCGTGCCGATTTTCCAGAACC
ACAGTGCCTCGCGGCGACTAGTCATGTGGGAAGATATTGTACTGTCAACA
GAGCATGCGTATGATGTCCCTACGAACATCGTCATGCAGACCTGGAACAG
CGGGCTGGACTACATCAACCAGCTGACCGCCAAGGGCTACGACGTTATTG
TATCATCGGCGGATTTTATGTATTTGGACTGCGGGATGGGGGGCTTCCTA
ACGAATGATCCTCGCTACGATGTAATGAGTAATCCTGATGCAAGCACAGC
AAACTTCAACTACGGCGGCAACGGGGGCTCGTGGTGTGCGCCGTACAAGA
CATGGCAGCGCATCTACGACTACGACTTCACGCAGAACCTTACTGTTACT
CAGGCCCAGCACATTGTAGGAGCAGAGGCGCCGCTCTGGTCAGAGCAAGT
GGATGATGTAACGGTATCCAGTCAATTTTGGCCGCGTGCCGCTGCGCTGG
CGGAGCTGGTGTGGTCTGGGAATCGTGATGAGAACGGGCGGAAACGCACG
ACGCTGATGACCCAGCGCATCCTGAACTTCCGCGAGTATCTGGTGGCCAA
CGGGGTTCAAGCGCAAGCGTTGGTTCCTAAGTACTGTGTGCAGCGTCCGC
ATACCTGCGACTTGTATCTAAACCAGAGTGCGATTCAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004563 | beta-N-acetylhexosaminidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH20 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR015883 |
| DBxref | InterPro:IPR025705 |
| DBxref | PFAM:PF00728 |
| Product | woronin body major protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:635627..636667 - |
|
