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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:636743..637431- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007999-T1 ID=KJC3_007999-T1|Name=KJC3_007999-T1|organism=Aspergillus niger KJC3|type=mRNA|length=689bp|location=Sequence derived from alignment at ch6:636743..637431- (Aspergillus niger KJC3)
ATGCTACTTCCTCGTCTCTGGCTGGCGTGCCTCACGCTGCTCGTGGCTGG
GGTCGCTGCCGTCAAGTTCAATCCCTTACCAGCTCCACGCAACATCAACT
GGGCTTCGTCGGGCCCTAAGCAGCTGGCCGGCTTCGTCAGTCTCCGTGCT
TCCCAGAACACGTCTGATTTTATTCTGGCCAATGGATGGGACCGTGCTTG
GGATTCTATCGTCTCCCTGCAATGGGTACCTGCAGCGACCGAAGGTCCCG
TGCCATCTTTTCAACCCTTCCCCACCGGTACGGCCGGGGTCGCTAGAAGG
TCCTCGCAGGCACTGCCATCGCTCCAGTTTGTCGATGTGGATGTGTTGGA
TTTGGCGCAGATCTCCAGCATGGGGTGGATGAGTCTTACACCCTCGAAGT
CACCGAAAGTGCTACCTCGGTGGTCATTGAGGCTCCCACCGTGTGGGGGG
CGCTCCATGCCTTTACCACTCTCCAGCAGCTGGTCATCTCCGACGGACAG
GGGGGCTTGTTGATCGAGCAGCCCGTTAAGATTCAGGATGCCCCGCTCTA
TCCCTACCGAGGGATTATGCTTGATAGTGGTCGAAACTTCATCTCGGTCA
ACAAGATTTACGAGCAGCTGGACGGCATGTCCTTTCAAAACTCAACGTTC
TACACTGGCACATGGAAGACACCTAATCGTGGCCCATAG back to topCoding sequence (CDS) from alignment at ch6:636743..637431- >KJC3_007999-T1 ID=KJC3_007999-T1|Name=KJC3_007999-T1|organism=Aspergillus niger KJC3|type=CDS|length=1248bp|location=Sequence derived from alignment at ch6:636743..637431- (Aspergillus niger KJC3)
TGCTACCTCGGTGGTCATTGAGGCTCCCACCGTGTGGGGGGCGCTCCATG
CCTTTACCACTCTCCAGCAGCTGGTCATCTCCGACGGACAGGGGGGCTTG
TTGATCGAGCAGCCCGTTAAGATTCAGGATGCCCCGCTCTATCCCTACCG
AGGGATTATGCTTGATAGTGGTCGAAACTTCATCTCGGTCAACAAGATTT
ACGAGCAGCTGGACGGCATGTCCTTTCAAAACTCAACGTTCTACACTGGC
ACATGGAAGACACCTAATCGTGGCCCATAGATGCTACTTCCTCGTCTCTG
GCTGGCGTGCCTCACGCTGCTCGTGGCTGGGGTCGCTGCCGTCAAGTTCA
ATCCCTTACCAGCTCCACGCAACATCAACTGGGCTTCGTCGGGCCCTAAG
CAGCTGGCCGGCTTCGTCAGTCTCCGTGCTTCCCAGAACACGTCTGATTT
TATTCTGGCCAATGGATGGGACCGTGCTTGGGATTCTATCGTCTCCCTGC
AATGGGTACCTGCAGCGACCGAAGGTCCCGTGCCATCTTTTCAACCCTTC
CCCACCGGTACGGCCGGGGTCGCTAGAAGGTCCTCGCAGGCACTGCCATC
GCTCCAGTTTGTCGATGTGGATGTTGCTACCTCGGTGGTCATTGAGGCTC
CCACCGTGTGGGGGGCGCTCCATGCCTTTACCACTCTCCAGCAGCTGGTC
ATCTCCGACGGACAGGGGGGCTTGTTGATCGAGCAGCCCGTTAAGATTCA
GGATGCCCCGCTCTATCCCTACCGAGGGATTATGCTTGATAGTGGTCGAA
ACTTCATCTCGGTCAACAAGATTTACGAGCAGCTGGACGGCATGTCCTTT
CAAAACTCAACGTTCTACACTGGCACATGGAAGACACCTAATCGTGGCCC
ATAGATGCTACTTCCTCGTCTCTGGCTGGCGTGCCTCACGCTGCTCGTGG
CTGGGGTCGCTGCCGTCAAGTTCAATCCCTTACCAGCTCCACGCAACATC
AACTGGGCTTCGTCGGGCCCTAAGCAGCTGGCCGGCTTCGTCAGTCTCCG
TGCTTCCCAGAACACGTCTGATTTTATTCTGGCCAATGGATGGGACCGTG
CTTGGGATTCTATCGTCTCCCTGCAATGGGTACCTGCAGCGACCGAAGGT
CCCGTGCCATCTTTTCAACCCTTCCCCACCGGTACGGCCGGGGTCGCTAG
AAGGTCCTCGCAGGCACTGCCATCGCTCCAGTTTGTCGATGTGGATGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004563 | beta-N-acetylhexosaminidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR029019 |
| DBxref | InterPro:IPR015883 |
| DBxref | InterPro:IPR029018 |
| DBxref | InterPro:IPR025705 |
| DBxref | PFAM:PF14845 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:636743..637431 - |
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