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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:637855..640984+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008000-T1 ID=KJC3_008000-T1|Name=KJC3_008000-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3130bp|location=Sequence derived from alignment at ch6:637855..640984+ (Aspergillus niger KJC3)
CTTCAGTTCCCAACATCTCGAATTCACACTTACTTCAATTCAGATTTTGC
AACCGAATTCTGGGTCCGTGGGGTGGTGATTAGCTGTATATCTGTATTTT
ACAGAGTTATATTGGATTCCGGATGTATCTAGGTGCCTCCACGCACTCTG
TCAGTTAGTAGTTTTGGTTACCTCGCCGTGTTTCGCTCGCGACATCCGAT
GACATAGATCACTATTTATGAGACATCAACAACCACGACAAGCCCAGTTC
TGATGCGCCTCTTTTGGATTACACCTCATTACGGGCGTGGAGCTTCCTGC
GAGTACCAGCGCTAACCCGCGACGCAATTGGCGCAACATGGAGGATATCC
GACCGACCGCGAAATGGGCGAACCGCATGTTGCGCCCGTTGACATCCATC
CACCACCGACTCCAGAAACACTATGAGATTCGCAACAGCATAGCAGACAC
AAAATCGAAAGCCAAACCCGATCACCACGATTCCGACCGTTTGCGACTCC
AACCAAATAACAAGAAAACCGGTCCAGACCCAGGCTGCAATCTTTCAGAC
GAGGAACCCGACGATCCAGCATGGATTCCAGGGAACCGGGGAAGTCGCCG
GCCGAGGCATAATTACTCGAATCGCGGTCAGAGAAATGGCGCCCGGAGAC
GCAGTCGACTCTTGATTAAGAGCCCGGAAGTGCAGAGGACGCTGCCTGGC
GCTATCGAAATCGCGACCCCGTTGATCACAGGAACTGCGCCAGGACCGGC
GGAAGCGACATTATCTATTCGCAAACGGCTTTTTCAGAATCCCATACCAC
CAGTGAGTGCTGTCGGGGCCAACGAGCGGCGCAGGCAGTCGCGGACGAAT
AAACCCAGTTTTCCAGCATACCAGGGCTCATGGAAGGAGGTTTTGGATCT
ATCGGGGGATCCGGGCTTGGTGGATATTGCGCGCTTTTTGGATCGCATGC
TTATTAATTTTTTGGAGAATACTAGGCCCGCTCCGGCGATACACAAACAT
GAACAGGAGGGTCGCGGTGCCCGATCGTTGCTGTCTATGGCTGCGCGACG
GCTTCCGGAGTTCATTGCTGAGGAGCAGCGGCTGCAGGATGAGGCGGAGC
CGGATGAGGATGTTGATATGTGTGATGCATACTTTACCGAACTTGAAGCT
CAATATGCTCCTGGCGGCGGTGGATGGCAGCCGCTTCGTGAAGCTGTGCG
TGCGCAAGGCATCCATCTGATTTCGGAGATGATGCAGAGAGAATGGGTAC
CCAAATTGGCTGCCTGTCGCTTGCTAGAGCAATGTCTTGAGCACAGGGAG
TTGGATGCTTTCGAAACACTTATATCAGGATATCTTACGACCGTCAAGAC
ACACGACTACCCAACGGCTTTTGACCCTTCGAAACCTGCGGGCCACTGCG
ATAATCCTATCTACATACTGCGCAATTACTATTCCAAGGCCCCTGAAAGG
AGATCTTTTATTTTTGATGAGATGACAAAGCTCCTGTCTCGTGGGGCTTT
TCCGCCAGAGTGGATGGTCACCACAAGATGGAAAAAGTGCGTGGACGGGG
CTATCCGGTCACTGTCAATTGGCGACGAAGATTCAGCTGCTGCGACCCGG
ACTATCGAGGCTATCATCCTCTCATCTGCTGGTATCTACCCCGCCACGGA
TTCGCTGGTAGCTCGGAGCAAGGGGAGAAAGGTACCTCGGTCTGTACGTC
TAAAGGACACCCGTGCGTCGGTAACGAAGCCTACAAGCGTGCCTAAAGAC
CAAGCTCCATGCCCTGTTCCCATCCAGGATGCGCTCAGCAATCTTTCAGC
GAGTCTGATTACCGCACTCTGTGGCATGTATATGGCACGGACGCAAACCT
CTGGCGTCAATGACAAGTTGACAGGCAGGAAGGTCAGGCATATTGTTGAG
GCACTGTCTTTCGGGGTGCAACGGGCGATCGGATTGGTACTATCGCGGCG
TGAGATGGAGGGTCCAAGCTTCCACTCCCTGCGTCGGGGATACATCTTGT
TGGGTGAGTGGACGCTGCAGTGCAGTGAAAATTGCACGCCCGAGGTCATT
GGCCAGTCCGACGCCATTTCGCCAGAAAACTTAGAATCGCTTTGTCTATC
GTTGGTACATCAAGAGAATGCAATCAAGCAACTAGCGGATTTTGTCCAAC
AAGTCTTTCGATGCTGCGGCCATGAGCGCGAAGATGATCTTGCGAGGACA
CCTCGGAAAATTCGAGCGATCGTATGGCGGCTTGCACAGGTGACGACGAT
GAAGGGCATTTCTCTGCTCCTCGCCAAGGTGGCTGCGGAAACAGCAATGG
CGCTGGCGGAGGTTACATTGGATGTGGATGACCACGCGTGGGCTCTCGAA
ATCCAAGAACAAGCCGCTTCATCCCAGCAAGATAGAAATGCTCATCACTC
TGCCGCATTGGCGCGTGTGCCACAAACCGATGTGATCCGCCTGTATCGAT
GGGAAGAAAGCATTGGGGAATGGGTAGCCAGCACGCCGGTCGCCAAACCC
GTGGCTCCCCGTAATGACGGCGCTTCAAGCCCTGCGGCTGCGAGAGCTGA
GCGGCGACCATCGGCGATAGCCTGTTCGATCAGTAGCAAGTCGCCCAGCC
CTGAACCTTCGGAGGAGGCTGCATCCAGCGTGACATCATCTGCGCCATCG
ATGAGCTGGAAACGCGAACGTGGGACAAATGATTGGAGGCCACCGTCACC
CAAGAGACTTCGGTCAAGTTCGAGGAGGATGGCTGCGGCTGGTTCCCTCG
AACCCAATTCTGCACCGATAGCCACCCGGGCGCGGGCGGCCCTTCGCGAT
CTACCCCAGGCCAAGAACAGCGCCTTGAAGAAGACGGGACTACAATCGGG
CCCAATCACACCCAGCAACTCCCGGGCGGACCCTACCAAAGTGACTCCCC
TGATTGAGGTGGTTATCATCAACCAGCCCGTCTCGGTGAAGCCGCTGATT
CGGACTCCCAGTATGGCACGGCAACAACAAGAACAACAGCCACCACCCCC
AACACTGATTTCCAGTCCATCGGAGATGCAGGGTCCTCGACGCTCCACTC
GTACGCGACCTCCCCCAGTCGAGCGGATAATTCCGTGCTCGGACGATGAT
AGCGAAGACGAGCTGAGTTTTCTGTTGTGA back to topCoding sequence (CDS) from alignment at ch6:637855..640984+ >KJC3_008000-T1 ID=KJC3_008000-T1|Name=KJC3_008000-T1|organism=Aspergillus niger KJC3|type=CDS|length=2793bp|location=Sequence derived from alignment at ch6:637855..640984+ (Aspergillus niger KJC3)
ATGGAGGATATCCGACCGACCGCGAAATGGGCGAACCGCATGTTGCGCCC
GTTGACATCCATCCACCACCGACTCCAGAAACACTATGAGATTCGCAACA
GCATAGCAGACACAAAATCGAAAGCCAAACCCGATCACCACGATTCCGAC
CGTTTGCGACTCCAACCAAATAACAAGAAAACCGGTCCAGACCCAGGCTG
CAATCTTTCAGACGAGGAACCCGACGATCCAGCATGGATTCCAGGGAACC
GGGGAAGTCGCCGGCCGAGGCATAATTACTCGAATCGCGGTCAGAGAAAT
GGCGCCCGGAGACGCAGTCGACTCTTGATTAAGAGCCCGGAAGTGCAGAG
GACGCTGCCTGGCGCTATCGAAATCGCGACCCCGTTGATCACAGGAACTG
CGCCAGGACCGGCGGAAGCGACATTATCTATTCGCAAACGGCTTTTTCAG
AATCCCATACCACCAGTGAGTGCTGTCGGGGCCAACGAGCGGCGCAGGCA
GTCGCGGACGAATAAACCCAGTTTTCCAGCATACCAGGGCTCATGGAAGG
AGGTTTTGGATCTATCGGGGGATCCGGGCTTGGTGGATATTGCGCGCTTT
TTGGATCGCATGCTTATTAATTTTTTGGAGAATACTAGGCCCGCTCCGGC
GATACACAAACATGAACAGGAGGGTCGCGGTGCCCGATCGTTGCTGTCTA
TGGCTGCGCGACGGCTTCCGGAGTTCATTGCTGAGGAGCAGCGGCTGCAG
GATGAGGCGGAGCCGGATGAGGATGTTGATATGTGTGATGCATACTTTAC
CGAACTTGAAGCTCAATATGCTCCTGGCGGCGGTGGATGGCAGCCGCTTC
GTGAAGCTGTGCGTGCGCAAGGCATCCATCTGATTTCGGAGATGATGCAG
AGAGAATGGGTACCCAAATTGGCTGCCTGTCGCTTGCTAGAGCAATGTCT
TGAGCACAGGGAGTTGGATGCTTTCGAAACACTTATATCAGGATATCTTA
CGACCGTCAAGACACACGACTACCCAACGGCTTTTGACCCTTCGAAACCT
GCGGGCCACTGCGATAATCCTATCTACATACTGCGCAATTACTATTCCAA
GGCCCCTGAAAGGAGATCTTTTATTTTTGATGAGATGACAAAGCTCCTGT
CTCGTGGGGCTTTTCCGCCAGAGTGGATGGTCACCACAAGATGGAAAAAG
TGCGTGGACGGGGCTATCCGGTCACTGTCAATTGGCGACGAAGATTCAGC
TGCTGCGACCCGGACTATCGAGGCTATCATCCTCTCATCTGCTGGTATCT
ACCCCGCCACGGATTCGCTGGTAGCTCGGAGCAAGGGGAGAAAGGTACCT
CGGTCTGTACGTCTAAAGGACACCCGTGCGTCGGTAACGAAGCCTACAAG
CGTGCCTAAAGACCAAGCTCCATGCCCTGTTCCCATCCAGGATGCGCTCA
GCAATCTTTCAGCGAGTCTGATTACCGCACTCTGTGGCATGTATATGGCA
CGGACGCAAACCTCTGGCGTCAATGACAAGTTGACAGGCAGGAAGGTCAG
GCATATTGTTGAGGCACTGTCTTTCGGGGTGCAACGGGCGATCGGATTGG
TACTATCGCGGCGTGAGATGGAGGGTCCAAGCTTCCACTCCCTGCGTCGG
GGATACATCTTGTTGGGTGAGTGGACGCTGCAGTGCAGTGAAAATTGCAC
GCCCGAGGTCATTGGCCAGTCCGACGCCATTTCGCCAGAAAACTTAGAAT
CGCTTTGTCTATCGTTGGTACATCAAGAGAATGCAATCAAGCAACTAGCG
GATTTTGTCCAACAAGTCTTTCGATGCTGCGGCCATGAGCGCGAAGATGA
TCTTGCGAGGACACCTCGGAAAATTCGAGCGATCGTATGGCGGCTTGCAC
AGGTGACGACGATGAAGGGCATTTCTCTGCTCCTCGCCAAGGTGGCTGCG
GAAACAGCAATGGCGCTGGCGGAGGTTACATTGGATGTGGATGACCACGC
GTGGGCTCTCGAAATCCAAGAACAAGCCGCTTCATCCCAGCAAGATAGAA
ATGCTCATCACTCTGCCGCATTGGCGCGTGTGCCACAAACCGATGTGATC
CGCCTGTATCGATGGGAAGAAAGCATTGGGGAATGGGTAGCCAGCACGCC
GGTCGCCAAACCCGTGGCTCCCCGTAATGACGGCGCTTCAAGCCCTGCGG
CTGCGAGAGCTGAGCGGCGACCATCGGCGATAGCCTGTTCGATCAGTAGC
AAGTCGCCCAGCCCTGAACCTTCGGAGGAGGCTGCATCCAGCGTGACATC
ATCTGCGCCATCGATGAGCTGGAAACGCGAACGTGGGACAAATGATTGGA
GGCCACCGTCACCCAAGAGACTTCGGTCAAGTTCGAGGAGGATGGCTGCG
GCTGGTTCCCTCGAACCCAATTCTGCACCGATAGCCACCCGGGCGCGGGC
GGCCCTTCGCGATCTACCCCAGGCCAAGAACAGCGCCTTGAAGAAGACGG
GACTACAATCGGGCCCAATCACACCCAGCAACTCCCGGGCGGACCCTACC
AAAGTGACTCCCCTGATTGAGGTGGTTATCATCAACCAGCCCGTCTCGGT
GAAGCCGCTGATTCGGACTCCCAGTATGGCACGGCAACAACAAGAACAAC
AGCCACCACCCCCAACACTGATTTCCAGTCCATCGGAGATGCAGGGTCCT
CGACGCTCCACTCGTACGCGACCTCCCCCAGTCGAGCGGATAATTCCGTG
CTCGGACGATGATAGCGAAGACGAGCTGAGTTTTCTGTTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008000-T1.utr5p1 | KJC3_008000-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:637855..640984 + |
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