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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:645219..647217+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008003-T1 ID=KJC3_008003-T1|Name=KJC3_008003-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1999bp|location=Sequence derived from alignment at ch6:645219..647217+ (Aspergillus niger KJC3)
GCTTATCATGTTGAGTTTTCCCGTTCGGAGGAATTGGCTTTTGAGCGCCT
TTTGCATACTAACTTGTTCGGCGTGAAACCATCCAACCTGTTATAGATCG
CCGCGACATTTCAACTGGAGTATCCACAATAAATTTCGGATCGCATATAG
ACGAGACGGCGCATACAATATAAAAACACATCAGGATGGCGTCCTGGATC
CAACGCCAGGGTGGATCTCATCAGACACAACTTGCAGCTACAGCGGTGAT
TTCGGGAGCTGCGGTCGCAGGTGCGATCTTTGGCTACCAGGCATTCAGAC
GGAAGGAAGCAGTACAGCGCCTCAAGGCGTCCATACCGGATGTTAACAAC
CAACACCATGCGGAGAAGGTATTCTAGGATCTTCTGATCGTGATATGTTA
GATTTGGCTAATTCATAAAAAGCTCACAGAATACGGTGTCGCGGCTGCAA
CGCAGCTGAGCAAGGAAGATGAAAGGAGTGCGCTTCTTGCTCGGAGGGCG
CAGGAAGGAGACTATGATGATGGTACTGGCTACTTTTTGAGATACTTGCC
ATTATGCTAACTCAATATCTGTCTAGAGCTCATCCTCGAACAACTCGCCA
GAAACCGTGTCTTTCTATCTGATGAGGGTCTCGCGAGACTCCGCTCGTCA
TACATAATCGTGGTCGGATGCGGAGGAGTCGGGTCGCATGCCGTTGCATC
CCTTGCCCGCTCGGGTGTTTCCAAGATCCGCTTGATCGATTTTGATCAGG
TTACGCTTTCCTCATTGAACCGACACGCTCTTGCGACGCTGGCCGACGTC
GGAACGCCGAAGGTACATTGCATTCGCAAGAGACTGGAGCAGATCACACC
ATGGGTGAAATTCGACTGCCGGAACGAACTATTCGGGGGATCCGTCGCCG
ACAATCTTCTTGCGCCCTGGTCCTGGGACGACCATGATAAAGGACGCAAG
CCCGACTATGTGCTCGACTGCATCGACAACATCACGTCCAAGGTGGAGCT
TCTTCACTACTGTCATTCACACTCAATTCCCGTAATTTCGGCAATGGGAG
CAGGATGCAAGTCAGATCCAACGCGCGTTACGGTCGGTGATATCTCACTC
AGCACGGATGACCCGTTGTCGCGGAGCACTCGTCGGCGCCTGAAGTTGTT
GGGAGTGAATACAGGCATTCCTGTTGTTTTCTCTACTGAGAAGCCCGGCC
CTGGAAAAGCTACTCTTCTCCCATTGAACGAAGCAGAATTTAGTAAGGGT
GAGGTTGGTGAGCTTAGTGTGTTGCCCGATTTCCGGGCGCGAATCCTCCC
TGTGTTGGGAACAATGCCTGCAGTGTTTGGCTACACCGTGGCGAATCATG
TCATCTGCGATATCTCCGGCTATCCGATGGACTACAGCGTGGGTGGAAAG
GGTCGTGACAAGTTGTACGATGGAGTCTTGGCAGCCTTGCAGGGAACGCT
CGAGCGCTTGGCCCGGGCGGAGTATGGACCTAGCCTTGTCGGGCTTCGCC
TTCCTATCAGCAAGGATGATGTTGGATATTTGGTCGATGAGATCTTCCGC
GGCAAGAGTGTGGTCAGTGGCCTGCCCAGTCGAATCAGTCTCGTTCCCTG
GAAGCGCCCTGACAGAGGATTCGGACCTGATCCGGAGTGGATGAAGCAGG
GACAGACATTTGTTCCGCTTGAGTTGAAGGATTTAGTGTGTATGACCAAA
GATGAAGCTACGCGCCATGAAAAGGAAGTGCTTCTGGGTGGCAAGAAGCT
GGAGGAGGTATACGATGTCAAGACGATTGAAACGGTGCAGAAGCGCCAAC
AGGAGATGGAGTTTCACGAGCAATATCGCTAACAGAGCGGAGACGCTAAC
GAGATGATGTATGTTTCCTATATTATACGGACATGTGTAGCATATAGCAC
GGATGGTACTTGATATTTTTGCACCAATGGAAACCCCGGAGAATCTTGGT
ATGTATAGCAGTACCAGTCCAGAGTATCTTATCCAGTTTATCCAGATTG back to topCoding sequence (CDS) from alignment at ch6:645219..647217+ >KJC3_008003-T1 ID=KJC3_008003-T1|Name=KJC3_008003-T1|organism=Aspergillus niger KJC3|type=CDS|length=4617bp|location=Sequence derived from alignment at ch6:645219..647217+ (Aspergillus niger KJC3)
ATGGCGTCCTGGATCCAACGCCAGGGTGGATCTCATCAGACACAACTTGC
AGCTACAGCGGTGATTTCGGGAGCTGCGGTCGCAGGTGCGATCTTTGGCT
ACCAGGCATTCAGACGGAAGGAAGCAGTACAGCGCCTCAAGGCGTCCATA
CCGGATGTTAACAACCAACACCATGCGGAGAAGCTCACAGAATACGGTGT
CGCGGCTGCAACGCAGCTGAGCAAGGAAGATGAAAGGAGTGCGCTTCTTG
CTCGGAGGGCGCAGGAAGGAGACTATGATGATGAGCTCATCCTCGAACAA
CTCGCCAGAAACCGTGTCTTTCTATCTGATGAGGGTCTCGCGAGACTCCG
CTCGTCATACATAATCGTGGTCGGATGCGGAGGAGTCGGGTCGCATGCCG
TTGCATCCCTTGCCCGCTCGGGTGTTTCCAAGATCCGCTTGATCGATTTT
GATCAGGTTACGCTTTCCTCATTGAACCGACACGCTCTTGCGACGCTGGC
CGACGTCGGAACGCCGAAGGTACATTGCATTCGCAAGAGACTGGAGCAGA
TCACACCATGGGTGAAATTCGACTGCCGGAACGAACTATTCGGGGGATCC
GTCGCCGACAATCTTCTTGCGCCCTGGTCCTGGGACGACCATGATAAAGG
ACGCAAGCCCGACTATGTGCTCGACTGCATCGACAACATCACGTCCAAGG
TGGAGCTTCTTCACTACTGTCATTCACACTCAATTCCCGTAATTTCGGCA
ATGGGAGCAGGATGCAAGTCAGATCCAACGCGCGTTACGGTCGGTGATAT
CTCACTCAGCACGGATGACCCGTTGTCGCGGAGCACTCGTCGGCGCCTGA
AGTTGTTGGGAGTGAATACAGGCATTCCTGTTGTTTTCTCTACTGAGAAG
CCCGGCCCTGGAAAAGCTACTCTTCTCCCATTGAACGAAGCAGAATTTAG
TAAGGGTGAGGTTGGTGAGCTTAGTGTGTTGCCCGATTTCCGGGCGCGAA
TCCTCCCTGTGTTGGGAACAATGCCTGCAGTGTTTGGCTACACCGTGGCG
AATCATGTCATCTGCGATATCTCCGGCTATCCGATGGACTACAGCGTGGG
TGGAAAGGGTCGTGACAAGTTGTACGATGGAGTCTTGGCAGCCTTGCAGG
GAACGCTCGAGCGCTTGGCCCGGGCGGAGTATGGACCTAGCCTTGTCGGG
CTTCGCCTTCCTATCAGCAAGGATGATGTTGGATATTTGGTCGATGAGAT
CTTCCGCGGCAAGAGTGTGGTCAGTGGCCTGCCCAGTCGAATCAGTCTCG
TTCCCTGGAAGCGCCCTGACAGAGGATTCGGACCTGATCCGGAGTGGATG
AAGCAGGGACAGACATTTGTTCCGCTTGAGTTGAAGGATTTAGTGTGTAT
GACCAAAGATGAAGCTACGCGCCATGAAAAGGAAGTGCTTCTGGGTGGCA
AGAAGCTGGAGGAGGTATACGATGTCAAGACGATTGAAACGGTGCAGAAG
CGCCAACAGGAGATGGAGTTTCACGAGCAATATCGCTAAATGGCGTCCTG
GATCCAACGCCAGGGTGGATCTCATCAGACACAACTTGCAGCTACAGCGG
TGATTTCGGGAGCTGCGGTCGCAGGTGCGATCTTTGGCTACCAGGCATTC
AGACGGAAGGAAGCAGTACAGCGCCTCAAGGCGTCCATACCGGATGTTAA
CAACCAACACCATGCGGAGAAGCTCACAGAATACGGTGTCGCGGCTGCAA
CGCAGCTGAGCAAGGAAGATGAAAGGAGTGCGCTTCTTGCTCGGAGGGCG
CAGGAAGGAGACTATGATGATGAGCTCATCCTCGAACAACTCGCCAGAAA
CCGTGTCTTTCTATCTGATGAGGGTCTCGCGAGACTCCGCTCGTCATACA
TAATCGTGGTCGGATGCGGAGGAGTCGGGTCGCATGCCGTTGCATCCCTT
GCCCGCTCGGGTGTTTCCAAGATCCGCTTGATCGATTTTGATCAGGTTAC
GCTTTCCTCATTGAACCGACACGCTCTTGCGACGCTGGCCGACGTCGGAA
CGCCGAAGGTACATTGCATTCGCAAGAGACTGGAGCAGATCACACCATGG
GTGAAATTCGACTGCCGGAACGAACTATTCGGGGGATCCGTCGCCGACAA
TCTTCTTGCGCCCTGGTCCTGGGACGACCATGATAAAGGACGCAAGCCCG
ACTATGTGCTCGACTGCATCGACAACATCACGTCCAAGGTGGAGCTTCTT
CACTACTGTCATTCACACTCAATTCCCGTAATTTCGGCAATGGGAGCAGG
ATGCAAGTCAGATCCAACGCGCGTTACGGTCGGTGATATCTCACTCAGCA
CGGATGACCCGTTGTCGCGGAGCACTCGTCGGCGCCTGAAGTTGTTGGGA
GTGAATACAGGCATTCCTGTTGTTTTCTCTACTGAGAAGCCCGGCCCTGG
AAAAGCTACTCTTCTCCCATTGAACGAAGCAGAATTTAGTAAGGGTGAGG
TTGGTGAGCTTAGTGTGTTGCCCGATTTCCGGGCGCGAATCCTCCCTGTG
TTGGGAACAATGCCTGCAGTGTTTGGCTACACCGTGGCGAATCATGTCAT
CTGCGATATCTCCGGCTATCCGATGGACTACAGCGTGGGTGGAAAGGGTC
GTGACAAGTTGTACGATGGAGTCTTGGCAGCCTTGCAGGGAACGCTCGAG
CGCTTGGCCCGGGCGGAGTATGGACCTAGCCTTGTCGGGCTTCGCCTTCC
TATCAGCAAGGATGATGTTGGATATTTGGTCGATGAGATCTTCCGCGGCA
AGAGTGTGGTCAGTGGCCTGCCCAGTCGAATCAGTCTCGTTCCCTGGAAG
CGCCCTGACAGAGGATTCGGACCTGATCCGGAGTGGATGAAGCAGGGACA
GACATTTGTTCCGCTTGAGTTGAAGGATTTAGTGTGTATGACCAAAGATG
AAGCTACGCGCCATGAAAAGGAAGTGCTTCTGGGTGGCAAGAAGCTGGAG
GAGGTATACGATGTCAAGACGATTGAAACGGTGCAGAAGCGCCAACAGGA
GATGGAGTTTCACGAGCAATATCGCTAAATGGCGTCCTGGATCCAACGCC
AGGGTGGATCTCATCAGACACAACTTGCAGCTACAGCGGTGATTTCGGGA
GCTGCGGTCGCAGGTGCGATCTTTGGCTACCAGGCATTCAGACGGAAGGA
AGCAGTACAGCGCCTCAAGGCGTCCATACCGGATGTTAACAACCAACACC
ATGCGGAGAAGCTCACAGAATACGGTGTCGCGGCTGCAACGCAGCTGAGC
AAGGAAGATGAAAGGAGTGCGCTTCTTGCTCGGAGGGCGCAGGAAGGAGA
CTATGATGATGAGCTCATCCTCGAACAACTCGCCAGAAACCGTGTCTTTC
TATCTGATGAGGGTCTCGCGAGACTCCGCTCGTCATACATAATCGTGGTC
GGATGCGGAGGAGTCGGGTCGCATGCCGTTGCATCCCTTGCCCGCTCGGG
TGTTTCCAAGATCCGCTTGATCGATTTTGATCAGGTTACGCTTTCCTCAT
TGAACCGACACGCTCTTGCGACGCTGGCCGACGTCGGAACGCCGAAGGTA
CATTGCATTCGCAAGAGACTGGAGCAGATCACACCATGGGTGAAATTCGA
CTGCCGGAACGAACTATTCGGGGGATCCGTCGCCGACAATCTTCTTGCGC
CCTGGTCCTGGGACGACCATGATAAAGGACGCAAGCCCGACTATGTGCTC
GACTGCATCGACAACATCACGTCCAAGGTGGAGCTTCTTCACTACTGTCA
TTCACACTCAATTCCCGTAATTTCGGCAATGGGAGCAGGATGCAAGTCAG
ATCCAACGCGCGTTACGGTCGGTGATATCTCACTCAGCACGGATGACCCG
TTGTCGCGGAGCACTCGTCGGCGCCTGAAGTTGTTGGGAGTGAATACAGG
CATTCCTGTTGTTTTCTCTACTGAGAAGCCCGGCCCTGGAAAAGCTACTC
TTCTCCCATTGAACGAAGCAGAATTTAGTAAGGGTGAGGTTGGTGAGCTT
AGTGTGTTGCCCGATTTCCGGGCGCGAATCCTCCCTGTGTTGGGAACAAT
GCCTGCAGTGTTTGGCTACACCGTGGCGAATCATGTCATCTGCGATATCT
CCGGCTATCCGATGGACTACAGCGTGGGTGGAAAGGGTCGTGACAAGTTG
TACGATGGAGTCTTGGCAGCCTTGCAGGGAACGCTCGAGCGCTTGGCCCG
GGCGGAGTATGGACCTAGCCTTGTCGGGCTTCGCCTTCCTATCAGCAAGG
ATGATGTTGGATATTTGGTCGATGAGATCTTCCGCGGCAAGAGTGTGGTC
AGTGGCCTGCCCAGTCGAATCAGTCTCGTTCCCTGGAAGCGCCCTGACAG
AGGATTCGGACCTGATCCGGAGTGGATGAAGCAGGGACAGACATTTGTTC
CGCTTGAGTTGAAGGATTTAGTGTGTATGACCAAAGATGAAGCTACGCGC
CATGAAAAGGAAGTGCTTCTGGGTGGCAAGAAGCTGGAGGAGGTATACGA
TGTCAAGACGATTGAAACGGTGCAGAAGCGCCAACAGGAGATGGAGTTTC
ACGAGCAATATCGCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008641 | ubiquitin-like modifier activating enzyme activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008003-T1.utr5p1 | KJC3_008003-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008003-T1.utr3p1 | KJC3_008003-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261HB6 |
| DBxref | InterPro:IPR035985 |
| DBxref | InterPro:IPR000594 |
| DBxref | PFAM:PF00899 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:645219..647217 + |
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