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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:677100..679650+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008012-T1 ID=KJC3_008012-T1|Name=KJC3_008012-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2551bp|location=Sequence derived from alignment at ch6:677100..679650+ (Aspergillus niger KJC3)
TGATTGGCCTGGCATACTCTTCGTTCCTGTATTCACCAGGTTTTCTCGGT
CCACTCTTCGGTAATCAACTCCTCGCGTCTGCGCCGCTCCAATGGCCTTC
CATGTCTTTCTGCAGCTTATCATCGGCTCACAGCAGAAACAAGGGGCAAT
TGCATCCTACATTCCCTGCCAGATAGCCAACGATAATGCTTGATTCAAAC
TAGCACATGATTTCTTCAAGTGTGACTGGCGATACATCACCCCATAGCAC
TATGCTTGGTTACAGGTATGATACCATCAATATCGTCAGAACTACCATCG
TTTGACCCATGACTATCAGGCCTAGTTGCACACCGTTAATAGGAAGCACG
CCAAACAAATCTATGCATGCAGAGCACGGTCAATACGGACACTTACCACT
CTCGAAAACACAGCTAGTTACATAATGTATTATGCGCCATGGACTCGTAC
AAATACCCTTCCCGACCCCCTGGGGTGTCAACCATGGGCGTTGTACTGCT
CTCATTCATAGGCGTCCGTACTATATCTGGCTACCCTATTAGCACTTCGT
GCATCTCTCTTGTGCATTGGGGCTTTCTCAAGGGCTTACAGTACATACTT
GCGTCGCCCACGTGAAGTTTCCGACAGTCGCAACATCAACTGAGTATTGT
ATCACTTCTTCCCCCTAAACTCGGAGGGAATTCGTTCCAGAAACGCAGAC
GAGCAGGAGGTATCGATCGGAGTAGGCATAACCTGCAGGAATAGCCGCAA
TCATGCTGGTCTCTTTCAGTGTCGCATTCTACCTAGTGTCTCTACTATTT
TCCCCAGTGCGGGCTGTTCTAGAGGTCTTCGAGGTATACCAGCCCGTCCC
GACAGGCCATGGGAGCGTTGGTTGCAATGAGGCAATCCTCCTGATGGACC
ATGTCTTCGGCTATAGCTATGGTGAACCATACGTCGGTAGGAAACAGTGC
TGGACAGATGAGCCGATGAGTTCATAAGCTAAATATGAACCAGGGATCTA
CGAGCCACCGAATTGTACCTTTGACACCGTTCGCCTCAATCTCACTGTCA
CTTCCAATGGCACACAGTATGATCGCCTGGCGCTTATGTACTTAGGGGAC
ACAGAGGTGTTCCGAACATCAACTGCTGAACCAACGACCAACGGAATCAT
CTGGACCTATATCAAAGACATGTCTCAGTTCAACGTACTGTGGAAAGAAA
AACAGAAATTGATCTTTGATCTTGGAAACATCATTACTGATGTCTACACC
GGATCTTTCAATACCACTCTAACGGCGTATTTCTCATATGAGGGCAATGT
CAGAACCCCAGATATTATTCTTCCAATATCTGCGCGCAAATCCGCACAAA
ATGCATCAAGTGACTTTGAGCTTCCATCTGACAACGCCACGGTGCTATAT
CAGATCCCTCCGACAGCATCCCGTGCAGTTGTGTCTATTTCTGCATGTGG
CCAGTCAGAAGAAGAATTCTGGTGGTCCAACGTTCTCTCTGCCGATGAGT
GGACCTTCGACAATACCATTGGTGAGCTGTACGGGTACTCTCCATTCCGT
GAAGTCCAGCTTTATATCGACGGCGTCCTTGCTGGCGTGGACTGGCCGTT
TCCCATAATCTTCACCGGCGGTGTCGCTCCAGGGTTCTGGCGTCCTATTG
TGGGAATTGATGCTTTTGACCTACGCCAACCAGAGATCGATATCACACCC
TTCCTTCCCTTGCTCAAGGATAACAAGTCGCATTCTTTCGAGATCAGAGT
TACAGGCTTGAGTGTCGCAGATGACGGAACAGTGACTTTCGCCGACACAG
TTGGCTCCTACTGGGTGGTCACCGGCACTATATTCCTTTACTTGGACGAC
TCCATGTCTCAAACCGCAACCGGCCAGGCGCCCGAGGTGAACGCCCCGGC
GCCAACATTCGCCGTTACGCGGAATCTTGTCCAGAGTCGGAACGGGACAA
ACGAAACATTGGCATACTCTGTCGTGGCAGAAAGAACATTGACAGTGAAG
TCTTCTGAATATTCATGGAGTCAAAACCTCTCATACTCGAACTACGGATA
TCTGAACCAGCAAGGATTGAGCCAGAAAAACAATCAACAGACCTTCGGCT
CTAACACGATCGCTCAGCTTACTGGAAACAAAACTACGAACGAGGTCATT
TTCGAGTATCCGCTGATTTGTAACACGACGTATGGACTCGAAGATGGACT
TTCCATTAGTGCCTGGATCCGCAGAGGCCTAGATATCGAGTCGACCGGTG
GGCTCGGGGTCTCGACTTATACTTTTACCTCCGGGTCTTTGAATCTGCAT
ACAGAACAACATGGAACAGCGTATTATTATGAACCCTCTGACGATGAGAG
TTCGGTCTCGTATGGTGAAACGTTCGATGTCTTTGGAAGCAATGCCGGTG
GAGTTCAGTACTTTCGGAACGTCCATGCGGTAAATGGTACTGTTGTATCG
GATACTGACAGCTAGGAGGCATACAGTGCTCAATATCATTCAAGCATGTA
TGAGACCCAAGTATGATTAGGATAGATGAAATTAGAAATATATGACTGGA
T back to topCoding sequence (CDS) from alignment at ch6:677100..679650+ >KJC3_008012-T1 ID=KJC3_008012-T1|Name=KJC3_008012-T1|organism=Aspergillus niger KJC3|type=CDS|length=1380bp|location=Sequence derived from alignment at ch6:677100..679650+ (Aspergillus niger KJC3)
ATGTACTTAGGGGACACAGAGGTGTTCCGAACATCAACTGCTGAACCAAC
GACCAACGGAATCATCTGGACCTATATCAAAGACATGTCTCAGTTCAACG
TACTGTGGAAAGAAAAACAGAAATTGATCTTTGATCTTGGAAACATCATT
ACTGATGTCTACACCGGATCTTTCAATACCACTCTAACGGCGTATTTCTC
ATATGAGGGCAATGTCAGAACCCCAGATATTATTCTTCCAATATCTGCGC
GCAAATCCGCACAAAATGCATCAAGTGACTTTGAGCTTCCATCTGACAAC
GCCACGGTGCTATATCAGATCCCTCCGACAGCATCCCGTGCAGTTGTGTC
TATTTCTGCATGTGGCCAGTCAGAAGAAGAATTCTGGTGGTCCAACGTTC
TCTCTGCCGATGAGTGGACCTTCGACAATACCATTGGTGAGCTGTACGGG
TACTCTCCATTCCGTGAAGTCCAGCTTTATATCGACGGCGTCCTTGCTGG
CGTGGACTGGCCGTTTCCCATAATCTTCACCGGCGGTGTCGCTCCAGGGT
TCTGGCGTCCTATTGTGGGAATTGATGCTTTTGACCTACGCCAACCAGAG
ATCGATATCACACCCTTCCTTCCCTTGCTCAAGGATAACAAGTCGCATTC
TTTCGAGATCAGAGTTACAGGCTTGAGTGTCGCAGATGACGGAACAGTGA
CTTTCGCCGACACAGTTGGCTCCTACTGGGTGGTCACCGGCACTATATTC
CTTTACTTGGACGACTCCATGTCTCAAACCGCAACCGGCCAGGCGCCCGA
GGTGAACGCCCCGGCGCCAACATTCGCCGTTACGCGGAATCTTGTCCAGA
GTCGGAACGGGACAAACGAAACATTGGCATACTCTGTCGTGGCAGAAAGA
ACATTGACAGTGAAGTCTTCTGAATATTCATGGAGTCAAAACCTCTCATA
CTCGAACTACGGATATCTGAACCAGCAAGGATTGAGCCAGAAAAACAATC
AACAGACCTTCGGCTCTAACACGATCGCTCAGCTTACTGGAAACAAAACT
ACGAACGAGGTCATTTTCGAGTATCCGCTGATTTGTAACACGACGTATGG
ACTCGAAGATGGACTTTCCATTAGTGCCTGGATCCGCAGAGGCCTAGATA
TCGAGTCGACCGGTGGGCTCGGGGTCTCGACTTATACTTTTACCTCCGGG
TCTTTGAATCTGCATACAGAACAACATGGAACAGCGTATTATTATGAACC
CTCTGACGATGAGAGTTCGGTCTCGTATGGTGAAACGTTCGATGTCTTTG
GAAGCAATGCCGGTGGAGTTCAGTACTTTCGGAACGTCCATGCGGTAAAT
GGTACTGTTGTATCGGATACTGACAGCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008012-T1.utr3p1 | KJC3_008012-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-21) |
| DBxref | InterPro:IPR021102 |
| DBxref | PFAM:PF12222 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:677100..679650 + |
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