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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:677100..679650+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008012-T2 ID=KJC3_008012-T2|Name=KJC3_008012-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2551bp|location=Sequence derived from alignment at ch6:677100..679650+ (Aspergillus niger KJC3)
TGATTGGCCTGGCATACTCTTCGTTCCTGTATTCACCAGGTTTTCTCGGT
CCACTCTTCGGTAATCAACTCCTCGCGTCTGCGCCGCTCCAATGGCCTTC
CATGTCTTTCTGCAGCTTATCATCGGCTCACAGCAGAAACAAGGGGCAAT
TGCATCCTACATTCCCTGCCAGATAGCCAACGATAATGCTTGATTCAAAC
TAGCACATGATTTCTTCAAGTGTGACTGGCGATACATCACCCCATAGCAC
TATGCTTGGTTACAGGTATGATACCATCAATATCGTCAGAACTACCATCG
TTTGACCCATGACTATCAGGCCTAGTTGCACACCGTTAATAGGAAGCACG
CCAAACAAATCTATGCATGCAGAGCACGGTCAATACGGACACTTACCACT
CTCGAAAACACAGCTAGTTACATAATGTATTATGCGCCATGGACTCGTAC
AAATACCCTTCCCGACCCCCTGGGGTGTCAACCATGGGCGTTGTACTGCT
CTCATTCATAGGCGTCCGTACTATATCTGGCTACCCTATTAGCACTTCGT
GCATCTCTCTTGTGCATTGGGGCTTTCTCAAGGGCTTACAGTACATACTT
GCGTCGCCCACGTGAAGTTTCCGACAGTCGCAACATCAACTGAGTATTGT
ATCACTTCTTCCCCCTAAACTCGGAGGGAATTCGTTCCAGAAACGCAGAC
GAGCAGGAGGTATCGATCGGAGTAGGCATAACCTGCAGGAATAGCCGCAA
TCATGCTGGTCTCTTTCAGTGTCGCATTCTACCTAGTGTCTCTACTATTT
TCCCCAGTGCGGGCTGTTCTAGAGGTCTTCGAGGTATACCAGCCCGTCCC
GACAGGCCATGGGAGCGTTGGTTGCAATGAGGCAATCCTCCTGATGGACC
ATGTCTTCGGCTATAGCTATGGTGAACCATACGTCGGTAGGAAACAGTGC
TGGACAGATGAGCCGATGAGTTCATAAGCTAAATATGAACCAGGGATCTA
CGAGCCACCGAATTGTACCTTTGACACCGTTCGCCTCAATCTCACTGTCA
CTTCCAATGGCACACAGTATGATCGCCTGGCGCTTATGTACTTAGGGGAC
ACAGAGGTGTTCCGAACATCAACTGCTGAACCAACGACCAACGGAATCAT
CTGGACCTATATCAAAGACATGTCTCAGTTCAACGTACTGTGGAAAGAAA
AACAGAAATTGATCTTTGATCTTGGAAACATCATTACTGATGTCTACACC
GGATCTTTCAATACCACTCTAACGGCGTATTTCTCATATGAGGGCAATGT
CAGAACCCCAGATATTATTCTTCCAATATCTGCGCGCAAATCCGCACAAA
ATGCATCAAGTGACTTTGAGCTTCCATCTGACAACGCCACGGTGCTATAT
CAGATCCCTCCGACAGCATCCCGTGCAGTTGTGTCTATTTCTGCATGTGG
CCAGTCAGAAGAAGAATTCTGGTGGTCCAACGTTCTCTCTGCCGATGAGT
GGACCTTCGACAATACCATTGGTGAGCTGTACGGGTACTCTCCATTCCGT
GAAGTCCAGCTTTATATCGACGGCGTCCTTGCTGGCGTGGACTGGCCGTT
TCCCATAATCTTCACCGGCGGTGTCGCTCCAGGGTTCTGGCGTCCTATTG
TGGGAATTGATGCTTTTGACCTACGCCAACCAGAGATCGATATCACACCC
TTCCTTCCCTTGCTCAAGGATAACAAGTCGCATTCTTTCGAGATCAGAGT
TACAGGCTTGAGTGTCGCAGATGACGGAACAGTGACTTTCGCCGACACAG
TTGGCTCCTACTGGGTGGTCACCGGCACTATATTCCTTTACTTGGACGAC
TCCATGTCTCAAACCGCAACCGGCCAGGCGCCCGAGGTGAACGCCCCGGC
GCCAACATTCGCCGTTACGCGGAATCTTGTCCAGAGTCGGAACGGGACAA
ACGAAACATTGGCATACTCTGTCGTGGCAGAAAGAACATTGACAGTGAAG
TCTTCTGAATATTCATGGAGTCAAAACCTCTCATACTCGAACTACGGATA
TCTGAACCAGCAAGGATTGAGCCAGAAAAACAATCAACAGACCTTCGGCT
CTAACACGATCGCTCAGCTTACTGGAAACAAAACTACGAACGAGGTCATT
TTCGAGTATCCGCTGATTTGTAACACGACGTATGGACTCGAAGATGGACT
TTCCATTAGTGCCTGGATCCGCAGAGGCCTAGATATCGAGTCGACCGGTG
GGCTCGGGGTCTCGACTTATACTTTTACCTCCGGGTCTTTGAATCTGCAT
ACAGAACAACATGGAACAGCGTATTATTATGAACCCTCTGACGATGAGAG
TTCGGTCTCGTATGGTGAAACGTTCGATGTCTTTGGAAGCAATGCCGGTG
GAGTTCAGTACTTTCGGAACGTCCATGCGGTAAATGGTACTGTTGTATCG
GATACTGACAGCTAGGAGGCATACAGTGCTCAATATCATTCAAGCATGTA
TGAGACCCAAGTATGATTAGGATAGATGAAATTAGAAATATATGACTGGA
T back to topCoding sequence (CDS) from alignment at ch6:677100..679650+ >KJC3_008012-T2 ID=KJC3_008012-T2|Name=KJC3_008012-T2|organism=Aspergillus niger KJC3|type=CDS|length=3312bp|location=Sequence derived from alignment at ch6:677100..679650+ (Aspergillus niger KJC3)
ATGCTGGTCTCTTTCAGTGTCGCATTCTACCTAGTGTCTCTACTATTTTC
CCCAGTGCGGGCTGTTCTAGAGGTCTTCGAGGTATACCAGCCCGTCCCGA
CAGGCCATGGGAGCGTTGGTTGCAATGAGGCAATCCTCCTGATGGACCAT
GTCTTCGGCTATAGCTATGGTGAACCATACGTCGGGATCTACGAGCCACC
GAATTGTACCTTTGACACCGTTCGCCTCAATCTCACTGTCACTTCCAATG
GCACACAGTATGATCGCCTGGCGCTTATGTACTTAGGGGACACAGAGGTG
TTCCGAACATCAACTGCTGAACCAACGACCAACGGAATCATCTGGACCTA
TATCAAAGACATGTCTCAGTTCAACGTACTGTGGAAAGAAAAACAGAAAT
TGATCTTTGATCTTGGAAACATCATTACTGATGTCTACACCGGATCTTTC
AATACCACTCTAACGGCGTATTTCTCATATGAGGGCAATGTCAGAACCCC
AGATATTATTCTTCCAATATCTGCGCGCAAATCCGCACAAAATGCATCAA
GTGACTTTGAGCTTCCATCTGACAACGCCACGGTGCTATATCAGATCCCT
CCGACAGCATCCCGTGCAGTTGTGTCTATTTCTGCATGTGGCCAGTCAGA
AGAAGAATTCTGGTGGTCCAACGTTCTCTCTGCCGATGAGTGGACCTTCG
ACAATACCATTGGTGAGCTGTACGGGTACTCTCCATTCCGTGAAGTCCAG
CTTTATATCGACGGCGTCCTTGCTGGCGTGGACTGGCCGTTTCCCATAAT
CTTCACCGGCGGTGTCGCTCCAGGGTTCTGGCGTCCTATTGTGGGAATTG
ATGCTTTTGACCTACGCCAACCAGAGATCGATATCACACCCTTCCTTCCC
TTGCTCAAGGATAACAAGTCGCATTCTTTCGAGATCAGAGTTACAGGCTT
GAGTGTCGCAGATGACGGAACAGTGACTTTCGCCGACACAGTTGGCTCCT
ACTGGGTGGTCACCGGCACTATATTCCTTTACTTGGACGACTCCATGTCT
CAAACCGCAACCGGCCAGGCGCCCGAGGTGAACGCCCCGGCGCCAACATT
CGCCGTTACGCGGAATCTTGTCCAGAGTCGGAACGGGACAAACGAAACAT
TGGCATACTCTGTCGTGGCAGAAAGAACATTGACAGTGAAGTCTTCTGAA
TATTCATGGAGTCAAAACCTCTCATACTCGAACTACGGATATCTGAACCA
GCAAGGATTGAGCCAGAAAAACAATCAACAGACCTTCGGCTCTAACACGA
TCGCTCAGCTTACTGGAAACAAAACTACGAACGAGGTCATTTTCGAGTAT
CCGCTGATTTGTAACACGACGTATGGACTCGAAGATGGACTTTCCATTAG
TGCCTGGATCCGCAGAGGCCTAGATATCGAGTCGACCGGTGGGCTCGGGG
TCTCGACTTATACTTTTACCTCCGGGTCTTTGAATCTGCATACAGAACAA
CATGGAACAGCGTATTATTATGAACCCTCTGACGATGAGAGTTCGGTCTC
GTATGGTGAAACGTTCGATGTCTTTGGAAGCAATGCCGGTGGAGTTCAGT
ACTTTCGGAACGTCCATGCGGTAAATGGTACTGTTGTATCGGATACTGAC
AGCTAGATGCTGGTCTCTTTCAGTGTCGCATTCTACCTAGTGTCTCTACT
ATTTTCCCCAGTGCGGGCTGTTCTAGAGGTCTTCGAGGTATACCAGCCCG
TCCCGACAGGCCATGGGAGCGTTGGTTGCAATGAGGCAATCCTCCTGATG
GACCATGTCTTCGGCTATAGCTATGGTGAACCATACGTCGGGATCTACGA
GCCACCGAATTGTACCTTTGACACCGTTCGCCTCAATCTCACTGTCACTT
CCAATGGCACACAGTATGATCGCCTGGCGCTTATGTACTTAGGGGACACA
GAGGTGTTCCGAACATCAACTGCTGAACCAACGACCAACGGAATCATCTG
GACCTATATCAAAGACATGTCTCAGTTCAACGTACTGTGGAAAGAAAAAC
AGAAATTGATCTTTGATCTTGGAAACATCATTACTGATGTCTACACCGGA
TCTTTCAATACCACTCTAACGGCGTATTTCTCATATGAGGGCAATGTCAG
AACCCCAGATATTATTCTTCCAATATCTGCGCGCAAATCCGCACAAAATG
CATCAAGTGACTTTGAGCTTCCATCTGACAACGCCACGGTGCTATATCAG
ATCCCTCCGACAGCATCCCGTGCAGTTGTGTCTATTTCTGCATGTGGCCA
GTCAGAAGAAGAATTCTGGTGGTCCAACGTTCTCTCTGCCGATGAGTGGA
CCTTCGACAATACCATTGGTGAGCTGTACGGGTACTCTCCATTCCGTGAA
GTCCAGCTTTATATCGACGGCGTCCTTGCTGGCGTGGACTGGCCGTTTCC
CATAATCTTCACCGGCGGTGTCGCTCCAGGGTTCTGGCGTCCTATTGTGG
GAATTGATGCTTTTGACCTACGCCAACCAGAGATCGATATCACACCCTTC
CTTCCCTTGCTCAAGGATAACAAGTCGCATTCTTTCGAGATCAGAGTTAC
AGGCTTGAGTGTCGCAGATGACGGAACAGTGACTTTCGCCGACACAGTTG
GCTCCTACTGGGTGGTCACCGGCACTATATTCCTTTACTTGGACGACTCC
ATGTCTCAAACCGCAACCGGCCAGGCGCCCGAGGTGAACGCCCCGGCGCC
AACATTCGCCGTTACGCGGAATCTTGTCCAGAGTCGGAACGGGACAAACG
AAACATTGGCATACTCTGTCGTGGCAGAAAGAACATTGACAGTGAAGTCT
TCTGAATATTCATGGAGTCAAAACCTCTCATACTCGAACTACGGATATCT
GAACCAGCAAGGATTGAGCCAGAAAAACAATCAACAGACCTTCGGCTCTA
ACACGATCGCTCAGCTTACTGGAAACAAAACTACGAACGAGGTCATTTTC
GAGTATCCGCTGATTTGTAACACGACGTATGGACTCGAAGATGGACTTTC
CATTAGTGCCTGGATCCGCAGAGGCCTAGATATCGAGTCGACCGGTGGGC
TCGGGGTCTCGACTTATACTTTTACCTCCGGGTCTTTGAATCTGCATACA
GAACAACATGGAACAGCGTATTATTATGAACCCTCTGACGATGAGAGTTC
GGTCTCGTATGGTGAAACGTTCGATGTCTTTGGAAGCAATGCCGGTGGAG
TTCAGTACTTTCGGAACGTCCATGCGGTAAATGGTACTGTTGTATCGGAT
ACTGACAGCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008012-T2.utr3p1 | KJC3_008012-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021102 |
| DBxref | PFAM:PF12222 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:677100..679650 + |
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