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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:680554..684794- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008013-T1 ID=KJC3_008013-T1|Name=KJC3_008013-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4241bp|location=Sequence derived from alignment at ch6:680554..684794- (Aspergillus niger KJC3)
CCGAACCAGGAACCCAAGGGCTGCGGACTCGACAGAACAGGCTGAGGTAG
CGAAACTGGTGTTGATCGCAATAATTTTACCTGGCCTGCCAGCTGAAGCC
TTTCCTGACACGAGAGCACGCATTAGTCGTAAGGCTGACAGCGATGACAC
TAACTGTAAGTTGGTCGAAGCCGTTGTCACTTTTGACATGATCATCTTTC
TCAAAAGGCTGAAGATACTATTTGTAGTAAGTGCGCAACCCTCCGACACC
GCTCTGGCCTTCACTCAGACTACCTGGCTGTGATATACTAAGTCTTGAGT
ACTTTGAGGAAGCGGCGCAGGAAAAATGACGAAATCGGCGAGACGTGGTG
GCAGCATTGGCTCTATTAGCTCGGCCCGAAGGTCATATCGAAGGGTTCCG
TGACCCGCCCATGGTTCCGCTCCGGAAGAACATAAAGTAGGACGAAAGAT
GAAGTGACTTGGTAAAGGCATTTTGTTACGTTATGCTGTTGGGTGAGTGA
AATAAGAGTCTCTGCCATTAAGGAGGACATGCAGAAACAATGCTTTTGGA
GTAGATGTGACATATCACAAGTAAGCCCTCGTTGAACCAATGATAAGGTC
CTTCTTGCCGCTGTGACCCCGCATTAGTCATTCTGGCCTAGCCAGCTGGC
CTTGCATCAGAACGACCATCAACTTGCACTGGAACAAAATTCTTCTCCCA
TCCCCAACAACCCAGTGGAGAGTACGAGAACTGCCTGCTGCTATTGGCTT
TTTTACTAAAATCCTGGCTCACAATGGCTTCTGGATCGGCTTATGCAGGT
TGGATACATGGAGCGTTTGTGGTACGTATCAAGTCTGAACAGACAATAAA
AGCGCACGACATCTAATGAAGGTTAAGGAAGTAAGTAGTTCGTCGAGAAG
TAGGATAGGCTGATGAATAATGAAGCTTTGCGTTTGCTTCAGGAGGTAAG
TCAAACCCATAGAAGAGTATCTTGGATGCGGTAATAGCTGACGGGGATAT
AATATTGGTATAGTGGGTGAGTCAGCCTTCCATGGAACAGTATCTTGGAG
GCGGTAATGGCTGACGGGGATATGATATTGGTATAGCCGGTAAGTTATTC
CATTAAGCAAGAGTATCTTGGATGTGGTAATAGCTGACGGGGATATTATA
TTGATATAGTTGGTAAGTCAGCCTTCTAAGCAAGAGTATCTTGGATGTGG
TAATAGCTGACGGGGATATGATATTGGTATAGAATGTAAGTCAGTCTTCT
ATGGAACAGTATCTTGGATGCGGTAATAGCTGACGGGGATATTATATTGG
TATAGCGGGTAAGTCATTCTTTTATGGAAGTATCTTGGATGCGGTAATAG
CTGACGGGGATATTATATTGGTATAGCGGGTAAGTCAGCCTTCCATGGAA
CAGTATCTTGGATGTGGTAATGGCTGACGGGGATATGATATTGGTATAGC
CGGTAAGTTATTCTTTTAAGCAAGAGTATCTTGGATGTGGTAATAGCTGA
CGGGGATATGATATTGGTATAGATTGTAAGTCAGTCTTCCATGGAACAGT
ATCTTGGATGTGGTAATGGCTGATGGAGATATAATATTGGTATAGTTGGT
AAGTCAGCCTTCTAAGCAAGAGTATCTTGGATGTGGTAATAGCTGACAGG
GATATGATATTGGTATAGGTTGTAAGTCAGTCTTCCATGGAACAGTATCT
TGCATGCAGTAATGGCTGACGGGGATATAATATTGGTTTAGAATGTAAGT
CAGTCTTCTATGGAACAGTATCTTGGATGCGGTAATAGCTGACGGGGATA
TGATATTGGTATAGCCGGTAAGTTATCCTTCTAAGCAAGAGTATCTTGGA
TGTGGTAATAGCTGACGGGGATATAATATTGGTATAGGTTGTAAGTCAGT
CTTCCATGGAACAGTATCTTGCATGCAGTAATGGCTGACGGGGATATAAT
ATTGGTTTAGAATGTAAGTCAGTCTTCTATGGAACAGTATCTTGGATGCG
GTAATAGCTGACGGGGATATGATATTGGTATAGCCGGTAAGTTATCCTTC
TAAGCAAGAGTATCTTGGATGTGGTAATAGCTGACGGGGATATGATATTG
GTATAGATTGTAAGTCAGTCTTCCATGGAACAGTATCTTGGATGCGGTAA
TGGCTGACGGGGATATGATATTGGTATAGCGGGTAAGTTATCCTTCTAAG
CAAGAGTATCTTGGATGCGGTAATAGCTGACGGGGATATGATATTGGTAT
AGAATGTAAGTCAGGCCCGTCTTAAAAAAAAAGTCATGACTGCTATGGCT
GTTGTCTGTTCCTTTCCGTGTTCTTAATTATAATGTCAGTATCGATGGTC
GTGCCAAACTGATACTGAAGTCACGGACCTCATTGCTGGTTGTAAAAATG
AATTCGTCCTCGGGAGATGCACGCCACTCCGCCATCTAAAAACCGCTTTC
AGGGTATGTACATGTTCAATACTTGGAACCCGAGATATTCTGACTTTATG
CAAGCAATATTCTCGTTCTAGAAACGATTCTGCAATTATTAGCCATTACC
TGGTTCACCGAGCCATGGATGATGCATATATCAGCATAGACCGACGCCAG
TCGTCCACTTTACATATCTCCAGCTACTCAGGTAAACAAGCCCTTTTCTT
TGGTTCTTTCATCTCTTCTTAATACAAATCTACGAGCAGATCTGCAAAAA
GAATACAAAGAATCAGGATATACCCATCATTTGCCGATTATCAATCGCTT
TGATGTGCTTCGTCAGTGGCTTGGAGTGTGTGACAAGCAGCATTCATGCA
TGCGGGGAAGGCGTCACGTCGTGCCAAAGCGCGTTATTTTCGTTGGAACA
GATCATTCAGATCAGCTGCAACTCCAAGAGTCCGCACACATAACACAGCC
ATTTGACTATATAACGCTATCGCACTGCTGGGGCAAGCCGACCGATGAGG
AGATGGAGCAATTCCGTACCACACCTCGGAACTACCAGAAACGACTAGAG
GGGTTCAGCTATCACAGCCTTCCAAAAGTTTTCCAGGACGCTATTACAGT
GACCCGAGAATTGAACAAGCAGTATCTTTGGATTGATGCTCTCTGCATCA
TTCAAGGTGACCAGAAAGACTGGGAGGAGGAAGGTTCAAAGATGGACAAA
GTATTTGCCTCTGCATACTGCACGATCGCGTCAAGTTCAGCATCCGGTTG
GAATGATGGCTTCCTCAATCGCACCCAGGATTTCGGTCAATCAGGAGTCA
GTTCCGATGAAAAGATCATTGATGACTTTTGTAAGCTTGTTGATGGAGGC
CAACTGCATACACGGGCCTGGGTGTTGCAAGAAAGGGCGCTTTCTCGCCG
AACCATCTATTTTACCTCACAACAGACATACTGGGAATGTGGATGGGGGG
TTCGTTGCGAGAATTTTACCACATTAAGATGGTAAGTCCGCTTCCCTAAA
GTCTGGGAAATATCGGTTGACCTACTGATTATGTTAGTCCCCTTACTAGA
TTATATCTACTTGACCCACGGTTTCCTGAGCGGCTCATAAGCGCAGGTTA
TAAATCAGCAGCCTTATTTCTCCAAGAGCTTATCGCGGACTACTCTCGTC
GTGATCTTACCTTTCCGAAAAAGGATAAGGTAATTGCATTTTCCGGCATA
GCTGAGCGTATTAAGGAAGCCCTATCTACTGAAGTCAGATACGGTGTCTT
CCGTTGCTTTCTTCCTCGGCTTCTCTTGTGGAAGCGGGCTGGAATGGAGA
ATGATCAAATTATTTACGACAATGATCGTGTACCGTCGTGGTCTTGGATG
CTTTACAATGGTAAAATTGACTTTCTGACACAATCGGATCTTCAAGTCCC
AAGGAACCAAAGCCTAAGCTTTGACAACTCCGAGCGCGGCATCAATATCG
AAGTTCGACAACTTGAAGATTGTTATACGCGAGAAAGGGATGGAGAGCAT
ATAATATTCACTAAGACAAAGAAGTTCGAAGTTACAACAGAAGTCGAAGT
TACGAAGGAAGTCGAAGTCGGCATCCTACATTTCGACATGGGTTCGGCGG
CCGAGGTTGAGTCTCGAAACTGTGTCGTCATCGCAATGAGTCAAGATGAC
GATAAGGATGACCCTAACAAGGATTACTATGTACTTGCCGTACAAAGAAC
ATCGGGAGAGGAAGAGTATGAAAGGCTGGGAGTTGGGCGAGTGCGAGCAT
GCTACGTCTCGAAAGGAAGTATTTCTGGGAAGCTTCTGTGA back to topCoding sequence (CDS) from alignment at ch6:680554..684794- >KJC3_008013-T1 ID=KJC3_008013-T1|Name=KJC3_008013-T1|organism=Aspergillus niger KJC3|type=CDS|length=4689bp|location=Sequence derived from alignment at ch6:680554..684794- (Aspergillus niger KJC3)
TCCCCTTACTAGATTATATCTACTTGACCCACGGTTTCCTGAGCGGCTCA
TAAGCGCAGGTTATAAATCAGCAGCCTTATTTCTCCAAGAGCTTATCGCG
GACTACTCTCGTCGTGATCTTACCTTTCCGAAAAAGGATAAGGTAATTGC
ATTTTCCGGCATAGCTGAGCGTATTAAGGAAGCCCTATCTACTGAAGTCA
GATACGGTGTCTTCCGTTGCTTTCTTCCTCGGCTTCTCTTGTGGAAGCGG
GCTGGAATGGAGAATGATCAAATTATTTACGACAATGATCGTGTACCGTC
GTGGTCTTGGATGCTTTACAATGGTAAAATTGACTTTCTGACACAATCGG
ATCTTCAAGTCCCAAGGAACCAAAGCCTAAGCTTTGACAACTCCGAGCGC
GGCATCAATATCGAAGTTCGACAACTTGAAGATTGTTATACGCGAGAAAG
GGATGGAGAGCATATAATATTCACTAAGACAAAGAAGTTCGAAGTTACAA
CAGAAGTCGAAGTTACGAAGGAAGTCGAAGTCGGCATCCTACATTTCGAC
ATGGGTTCGGCGGCCGAGGTTGAGTCTCGAAACTGTGTCGTCATCGCAAT
GAGTCAAGATGACGATAAGGATGACCCTAACAAGGATTACTATGTACTTG
CCGTACAAAGAACATCGGGAGAGGAAGAGTATGAAAGGCTGGGAGTTGGG
CGAGTGCGAGCATGCTACGTCTCGAAAGGAAGTATTTCTGGGAAGCTTCT
GTGAATCTGCAAAAAGAATACAAAGAATCAGGATATACCCATCATTTGCC
GATTATCAATCGCTTTGATGTGCTTCGTCAGTGGCTTGGAGTGTGTGACA
AGCAGCATTCATGCATGCGGGGAAGGCGTCACGTCGTGCCAAAGCGCGTT
ATTTTCGTTGGAACAGATCATTCAGATCAGCTGCAACTCCAAGAGTCCGC
ACACATAACACAGCCATTTGACTATATAACGCTATCGCACTGCTGGGGCA
AGCCGACCGATGAGGAGATGGAGCAATTCCGTACCACACCTCGGAACTAC
CAGAAACGACTAGAGGGGTTCAGCTATCACAGCCTTCCAAAAGTTTTCCA
GGACGCTATTACAGTGACCCGAGAATTGAACAAGCAGTATCTTTGGATTG
ATGCTCTCTGCATCATTCAAGGTGACCAGAAAGACTGGGAGGAGGAAGGT
TCAAAGATGGACAAAGTATTTGCCTCTGCATACTGCACGATCGCGTCAAG
TTCAGCATCCGGTTGGAATGATGGCTTCCTCAATCGCACCCAGGATTTCG
GTCAATCAGGAGTCAGTTCCGATGAAAAGATCATTGATGACTTTTGTAAG
CTTGTTGATGGAGGCCAACTGCATACACGGGCCTGGGTGTTGCAAGAAAG
GGCGCTTTCTCGCCGAACCATCTATTTTACCTCACAACAGACATACTGGG
AATGTGGATGGGGGGTTCGTTGCGAGAATTTTACCACATTAAGATGATGG
ATGATGCATATATCAGCATAGACCGACGCCAGTCGTCCACTTTACATATC
TCCAGCTACTCAGTCCCCTTACTAGATTATATCTACTTGACCCACGGTTT
CCTGAGCGGCTCATAAGCGCAGGTTATAAATCAGCAGCCTTATTTCTCCA
AGAGCTTATCGCGGACTACTCTCGTCGTGATCTTACCTTTCCGAAAAAGG
ATAAGGTAATTGCATTTTCCGGCATAGCTGAGCGTATTAAGGAAGCCCTA
TCTACTGAAGTCAGATACGGTGTCTTCCGTTGCTTTCTTCCTCGGCTTCT
CTTGTGGAAGCGGGCTGGAATGGAGAATGATCAAATTATTTACGACAATG
ATCGTGTACCGTCGTGGTCTTGGATGCTTTACAATGGTAAAATTGACTTT
CTGACACAATCGGATCTTCAAGTCCCAAGGAACCAAAGCCTAAGCTTTGA
CAACTCCGAGCGCGGCATCAATATCGAAGTTCGACAACTTGAAGATTGTT
ATACGCGAGAAAGGGATGGAGAGCATATAATATTCACTAAGACAAAGAAG
TTCGAAGTTACAACAGAAGTCGAAGTTACGAAGGAAGTCGAAGTCGGCAT
CCTACATTTCGACATGGGTTCGGCGGCCGAGGTTGAGTCTCGAAACTGTG
TCGTCATCGCAATGAGTCAAGATGACGATAAGGATGACCCTAACAAGGAT
TACTATGTACTTGCCGTACAAAGAACATCGGGAGAGGAAGAGTATGAAAG
GCTGGGAGTTGGGCGAGTGCGAGCATGCTACGTCTCGAAAGGAAGTATTT
CTGGGAAGCTTCTGTGAATCTGCAAAAAGAATACAAAGAATCAGGATATA
CCCATCATTTGCCGATTATCAATCGCTTTGATGTGCTTCGTCAGTGGCTT
GGAGTGTGTGACAAGCAGCATTCATGCATGCGGGGAAGGCGTCACGTCGT
GCCAAAGCGCGTTATTTTCGTTGGAACAGATCATTCAGATCAGCTGCAAC
TCCAAGAGTCCGCACACATAACACAGCCATTTGACTATATAACGCTATCG
CACTGCTGGGGCAAGCCGACCGATGAGGAGATGGAGCAATTCCGTACCAC
ACCTCGGAACTACCAGAAACGACTAGAGGGGTTCAGCTATCACAGCCTTC
CAAAAGTTTTCCAGGACGCTATTACAGTGACCCGAGAATTGAACAAGCAG
TATCTTTGGATTGATGCTCTCTGCATCATTCAAGGTGACCAGAAAGACTG
GGAGGAGGAAGGTTCAAAGATGGACAAAGTATTTGCCTCTGCATACTGCA
CGATCGCGTCAAGTTCAGCATCCGGTTGGAATGATGGCTTCCTCAATCGC
ACCCAGGATTTCGGTCAATCAGGAGTCAGTTCCGATGAAAAGATCATTGA
TGACTTTTGTAAGCTTGTTGATGGAGGCCAACTGCATACACGGGCCTGGG
TGTTGCAAGAAAGGGCGCTTTCTCGCCGAACCATCTATTTTACCTCACAA
CAGACATACTGGGAATGTGGATGGGGGGTTCGTTGCGAGAATTTTACCAC
ATTAAGATGATGGATGATGCATATATCAGCATAGACCGACGCCAGTCGTC
CACTTTACATATCTCCAGCTACTCAGTCCCCTTACTAGATTATATCTACT
TGACCCACGGTTTCCTGAGCGGCTCATAAGCGCAGGTTATAAATCAGCAG
CCTTATTTCTCCAAGAGCTTATCGCGGACTACTCTCGTCGTGATCTTACC
TTTCCGAAAAAGGATAAGGTAATTGCATTTTCCGGCATAGCTGAGCGTAT
TAAGGAAGCCCTATCTACTGAAGTCAGATACGGTGTCTTCCGTTGCTTTC
TTCCTCGGCTTCTCTTGTGGAAGCGGGCTGGAATGGAGAATGATCAAATT
ATTTACGACAATGATCGTGTACCGTCGTGGTCTTGGATGCTTTACAATGG
TAAAATTGACTTTCTGACACAATCGGATCTTCAAGTCCCAAGGAACCAAA
GCCTAAGCTTTGACAACTCCGAGCGCGGCATCAATATCGAAGTTCGACAA
CTTGAAGATTGTTATACGCGAGAAAGGGATGGAGAGCATATAATATTCAC
TAAGACAAAGAAGTTCGAAGTTACAACAGAAGTCGAAGTTACGAAGGAAG
TCGAAGTCGGCATCCTACATTTCGACATGGGTTCGGCGGCCGAGGTTGAG
TCTCGAAACTGTGTCGTCATCGCAATGAGTCAAGATGACGATAAGGATGA
CCCTAACAAGGATTACTATGTACTTGCCGTACAAAGAACATCGGGAGAGG
AAGAGTATGAAAGGCTGGGAGTTGGGCGAGTGCGAGCATGCTACGTCTCG
AAAGGAAGTATTTCTGGGAAGCTTCTGTGAATCTGCAAAAAGAATACAAA
GAATCAGGATATACCCATCATTTGCCGATTATCAATCGCTTTGATGTGCT
TCGTCAGTGGCTTGGAGTGTGTGACAAGCAGCATTCATGCATGCGGGGAA
GGCGTCACGTCGTGCCAAAGCGCGTTATTTTCGTTGGAACAGATCATTCA
GATCAGCTGCAACTCCAAGAGTCCGCACACATAACACAGCCATTTGACTA
TATAACGCTATCGCACTGCTGGGGCAAGCCGACCGATGAGGAGATGGAGC
AATTCCGTACCACACCTCGGAACTACCAGAAACGACTAGAGGGGTTCAGC
TATCACAGCCTTCCAAAAGTTTTCCAGGACGCTATTACAGTGACCCGAGA
ATTGAACAAGCAGTATCTTTGGATTGATGCTCTCTGCATCATTCAAGGTG
ACCAGAAAGACTGGGAGGAGGAAGGTTCAAAGATGGACAAAGTATTTGCC
TCTGCATACTGCACGATCGCGTCAAGTTCAGCATCCGGTTGGAATGATGG
CTTCCTCAATCGCACCCAGGATTTCGGTCAATCAGGAGTCAGTTCCGATG
AAAAGATCATTGATGACTTTTGTAAGCTTGTTGATGGAGGCCAACTGCAT
ACACGGGCCTGGGTGTTGCAAGAAAGGGCGCTTTCTCGCCGAACCATCTA
TTTTACCTCACAACAGACATACTGGGAATGTGGATGGGGGGTTCGTTGCG
AGAATTTTACCACATTAAGATGATGGATGATGCATATATCAGCATAGACC
GACGCCAGTCGTCCACTTTACATATCTCCAGCTACTCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010730 |
| DBxref | PFAM:PF06985 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:680554..684794 - |
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