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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:686453..689052- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008014-T1 ID=KJC3_008014-T1|Name=KJC3_008014-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2600bp|location=Sequence derived from alignment at ch6:686453..689052- (Aspergillus niger KJC3)
AGCCCTCTCAGTGTGCTTCCTGTTCGTCCCCACGCTCTGTCCACGCTGTT
TTCCCCCGAACTCTCCACGATCCAGCCGACTATGAATGCCGTTGTGGTTC
CCCGATGTCTGTCTCGCAGTGGCCTTCGGGCCACTACCCCAGCTCAATGC
ATGGTATTTATATCGCCATTTCCCCTTCACTTTCATCATGAAGATTCCTC
TTCCAGATCAGCTTCATTTATCTCTATCTTCTTCTCTCTCACCTTTGGGT
GATGTTCTAATCTGTCTCTTTCTTGTGATTATACCCGATCCCCACTCCGT
ATCTATTGACTTCCCCACCCCACCACTACCCCGAAGCTTGACCCGCTCTC
TCGCGTGCACACTGCCCACATGGCTCCTTCACAACAAGAGAAGTATGACA
TTGTCATCGTGGGCGCTGGCCCCGTTGGCATTGTCCTGTCGCTCTGCATG
TCCCGCTGGGGCTACAAGGTGAAGCACATTGACAACCGTCCGGTGCCGAC
CGCCACCGGTCGCGCCGATGGTATCCAGCCTCGTTCGACGGAGATCCTTC
GCAATCTGGGCTTGAAGCGCCAAATAATGGCCTTCAAGCCCGCTAAGGTG
TACGACGTTGCTTTCTGGGACCCTCTCCCCGGCGGACAAGGTATCCACCG
CACTGGCAGTTGGCCCAGCTGCCCCCGCTTTATCGATACAAGATACCCCT
TTACCACCCTGGTTCACCAGGGTAAGATCGAGCGCGTGTTCCTGGATGAG
ATCCAGAAGGCTGGTACCACAGTCGAGAGACCGTGGACCATCGTCGGTTT
CAAGAATGATGGCTTGGACGAGACCTACCCCGTCGAAGTGCAGCTTAAGA
GCATTGACACCAACGTAATCGAGACTGTTCGCACAAAGTATCTCTTCAGC
GGTGAAGGTGCTCGGAGTTTCATCAGACAGCAGCTTGGCATCCAGATCCA
GTACAAGGATCCCATCTCCTATGTCTGGGGTGTTATGGATGGTGTCGTGA
GGACCAACTTCCCCGACATCGAGGTAAGCAAATTCAGAATTCGGTCACGA
TGCGAACGGTCGCTAATCTTCTGCCAACAGACCAAGTGCACTATCCACTC
CGATGCCGGTTCTATCATGGTTATTCCCCGTGAGGACAACATGGTCCGTC
TGTATGTCCAGATCGCTTCGTCGGACGACCCCGACTTCGACCCCAGGAAG
ACAGCAACCGCAGAGGATGTCCAGGCCACTGCTCGGAAGATCCTTCAGCC
GTACTGGGTGGAATGGGATCGTGTTGAATGGTACTCCGTGTACCCGATCG
GCCAAGGTATCTCTGAGAAGTATACTCTCGATGAGCGTGTTTTCATGGGT
GGTGATGCTTGCCACACTCACAGCGTAAGTGTGCCTATTTCTCAAGGTAT
TCTGCCTGCCGAAATAAAAATGCGTTGCTAACACACACTGTAGCCCAAGG
CTGGTCAGGGAATGAACACTGCTTTCCACGATGCTCTGAACATGGCCTGG
AAGCTCCACGCCGTTGAGTCTGGTCTGGCTAAGCGCTCCATCCTCAGCAC
CTACGAGACCGAGCGCAAGGATATCGCCGAGACTCTGCTGAGCTTCGACA
ACAAGTACGCCGCCTTGTTTTCCAAGCGTCGCCCTACTGCCGGTGAGGTC
GGCGAGGCCAGCCACACCACTGCTGCGGCTGGCGGAGAGGAAGACGAGTT
CGTCAAGACCTTCAAGTCCTCTTGTGAATTCACCAGTGGCTACGGTGTTG
CCTACAAGCCTAATGTGTTCACCTGGGACGCTACCCACCCCGCTCAGTCC
CCACTGTTCGACGTCCCAGGTGTCCGCCTGACCCCTGGTCGCGCTTTCAC
GCCTACCACCGTCACCCGGTTAGCGGACTCCAACCACGTCCACCTGGAAC
AGGAGATCCCTGCCAACGGTGCGTTCCGTATCTTCATCTTTGCCGGTAAG
CAGGACAAGACCAGCAAGGCGATCACTGATCTTGCTGCCAACCTCGAGAA
GGAGCGCTCGTTCCTCTCCGTGTACCGCCGCGCCGACATTGCCGACGTGT
CGTTCTTCGAAAACCACCTGCCTCACTCCAAGCTGTTCTCCATCTGCCTG
GTCTACGCGGGCGAGAAGAACCAGATTGATGTGGACTCTATTCCCAAGAT
CCTCCGCGACTACCACCACCACCTCTATGCCGACAACATCCCCGACGTGC
GCGTTCCCCAGGCCACGTACGCCGCTCACGAGAAGCTGGGCTTCGACGTG
GAGAAGGGCGGTGTTGTTGTTACTCGCCCTGACAGCCACGTTGCCTGTAC
CATTCAGCTGTCCGAGGGCAGCGGCACTGTGGACGCCCTCAATGCCTTCT
TCGGCTCGTTTGCAACGAAGCCTTTAGGCCAGGACTCCCAGCAAAGCCGT
CTGTAAATGAACATATTGCAAACCACAAGTTTTGTACTTTAAAGATCTTT
TCCCCATCGATGTTAGGGTGAATACTGTACATAGTCTTTTCTACATTTTG
GTTTCTAGCTTCGTTCAGCCTGACTGATTATGAACCGGCATGGTTGGAGT
TGTTTTGTTTTGTCTTTGAGGAAATTCAATTCAAGTCTTGATATGTTGAA
back to topCoding sequence (CDS) from alignment at ch6:686453..689052- >KJC3_008014-T1 ID=KJC3_008014-T1|Name=KJC3_008014-T1|organism=Aspergillus niger KJC3|type=CDS|length=5733bp|location=Sequence derived from alignment at ch6:686453..689052- (Aspergillus niger KJC3)
CCCAAGGCTGGTCAGGGAATGAACACTGCTTTCCACGATGCTCTGAACAT
GGCCTGGAAGCTCCACGCCGTTGAGTCTGGTCTGGCTAAGCGCTCCATCC
TCAGCACCTACGAGACCGAGCGCAAGGATATCGCCGAGACTCTGCTGAGC
TTCGACAACAAGTACGCCGCCTTGTTTTCCAAGCGTCGCCCTACTGCCGG
TGAGGTCGGCGAGGCCAGCCACACCACTGCTGCGGCTGGCGGAGAGGAAG
ACGAGTTCGTCAAGACCTTCAAGTCCTCTTGTGAATTCACCAGTGGCTAC
GGTGTTGCCTACAAGCCTAATGTGTTCACCTGGGACGCTACCCACCCCGC
TCAGTCCCCACTGTTCGACGTCCCAGGTGTCCGCCTGACCCCTGGTCGCG
CTTTCACGCCTACCACCGTCACCCGGTTAGCGGACTCCAACCACGTCCAC
CTGGAACAGGAGATCCCTGCCAACGGTGCGTTCCGTATCTTCATCTTTGC
CGGTAAGCAGGACAAGACCAGCAAGGCGATCACTGATCTTGCTGCCAACC
TCGAGAAGGAGCGCTCGTTCCTCTCCGTGTACCGCCGCGCCGACATTGCC
GACGTGTCGTTCTTCGAAAACCACCTGCCTCACTCCAAGCTGTTCTCCAT
CTGCCTGGTCTACGCGGGCGAGAAGAACCAGATTGATGTGGACTCTATTC
CCAAGATCCTCCGCGACTACCACCACCACCTCTATGCCGACAACATCCCC
GACGTGCGCGTTCCCCAGGCCACGTACGCCGCTCACGAGAAGCTGGGCTT
CGACGTGGAGAAGGGCGGTGTTGTTGTTACTCGCCCTGACAGCCACGTTG
CCTGTACCATTCAGCTGTCCGAGGGCAGCGGCACTGTGGACGCCCTCAAT
GCCTTCTTCGGCTCGTTTGCAACGAAGCCTTTAGGCCAGGACTCCCAGCA
AAGCCGTCTGTAAACCAAGTGCACTATCCACTCCGATGCCGGTTCTATCA
TGGTTATTCCCCGTGAGGACAACATGGTCCGTCTGTATGTCCAGATCGCT
TCGTCGGACGACCCCGACTTCGACCCCAGGAAGACAGCAACCGCAGAGGA
TGTCCAGGCCACTGCTCGGAAGATCCTTCAGCCGTACTGGGTGGAATGGG
ATCGTGTTGAATGGTACTCCGTGTACCCGATCGGCCAAGGTATCTCTGAG
AAGTATACTCTCGATGAGCGTGTTTTCATGGGTGGTGATGCTTGCCACAC
TCACAGCATGGCTCCTTCACAACAAGAGAAGTATGACATTGTCATCGTGG
GCGCTGGCCCCGTTGGCATTGTCCTGTCGCTCTGCATGTCCCGCTGGGGC
TACAAGGTGAAGCACATTGACAACCGTCCGGTGCCGACCGCCACCGGTCG
CGCCGATGGTATCCAGCCTCGTTCGACGGAGATCCTTCGCAATCTGGGCT
TGAAGCGCCAAATAATGGCCTTCAAGCCCGCTAAGGTGTACGACGTTGCT
TTCTGGGACCCTCTCCCCGGCGGACAAGGTATCCACCGCACTGGCAGTTG
GCCCAGCTGCCCCCGCTTTATCGATACAAGATACCCCTTTACCACCCTGG
TTCACCAGGGTAAGATCGAGCGCGTGTTCCTGGATGAGATCCAGAAGGCT
GGTACCACAGTCGAGAGACCGTGGACCATCGTCGGTTTCAAGAATGATGG
CTTGGACGAGACCTACCCCGTCGAAGTGCAGCTTAAGAGCATTGACACCA
ACGTAATCGAGACTGTTCGCACAAAGTATCTCTTCAGCGGTGAAGGTGCT
CGGAGTTTCATCAGACAGCAGCTTGGCATCCAGATCCAGTACAAGGATCC
CATCTCCTATGTCTGGGGTGTTATGGATGGTGTCGTGAGGACCAACTTCC
CCGACATCGAGCCCAAGGCTGGTCAGGGAATGAACACTGCTTTCCACGAT
GCTCTGAACATGGCCTGGAAGCTCCACGCCGTTGAGTCTGGTCTGGCTAA
GCGCTCCATCCTCAGCACCTACGAGACCGAGCGCAAGGATATCGCCGAGA
CTCTGCTGAGCTTCGACAACAAGTACGCCGCCTTGTTTTCCAAGCGTCGC
CCTACTGCCGGTGAGGTCGGCGAGGCCAGCCACACCACTGCTGCGGCTGG
CGGAGAGGAAGACGAGTTCGTCAAGACCTTCAAGTCCTCTTGTGAATTCA
CCAGTGGCTACGGTGTTGCCTACAAGCCTAATGTGTTCACCTGGGACGCT
ACCCACCCCGCTCAGTCCCCACTGTTCGACGTCCCAGGTGTCCGCCTGAC
CCCTGGTCGCGCTTTCACGCCTACCACCGTCACCCGGTTAGCGGACTCCA
ACCACGTCCACCTGGAACAGGAGATCCCTGCCAACGGTGCGTTCCGTATC
TTCATCTTTGCCGGTAAGCAGGACAAGACCAGCAAGGCGATCACTGATCT
TGCTGCCAACCTCGAGAAGGAGCGCTCGTTCCTCTCCGTGTACCGCCGCG
CCGACATTGCCGACGTGTCGTTCTTCGAAAACCACCTGCCTCACTCCAAG
CTGTTCTCCATCTGCCTGGTCTACGCGGGCGAGAAGAACCAGATTGATGT
GGACTCTATTCCCAAGATCCTCCGCGACTACCACCACCACCTCTATGCCG
ACAACATCCCCGACGTGCGCGTTCCCCAGGCCACGTACGCCGCTCACGAG
AAGCTGGGCTTCGACGTGGAGAAGGGCGGTGTTGTTGTTACTCGCCCTGA
CAGCCACGTTGCCTGTACCATTCAGCTGTCCGAGGGCAGCGGCACTGTGG
ACGCCCTCAATGCCTTCTTCGGCTCGTTTGCAACGAAGCCTTTAGGCCAG
GACTCCCAGCAAAGCCGTCTGTAAACCAAGTGCACTATCCACTCCGATGC
CGGTTCTATCATGGTTATTCCCCGTGAGGACAACATGGTCCGTCTGTATG
TCCAGATCGCTTCGTCGGACGACCCCGACTTCGACCCCAGGAAGACAGCA
ACCGCAGAGGATGTCCAGGCCACTGCTCGGAAGATCCTTCAGCCGTACTG
GGTGGAATGGGATCGTGTTGAATGGTACTCCGTGTACCCGATCGGCCAAG
GTATCTCTGAGAAGTATACTCTCGATGAGCGTGTTTTCATGGGTGGTGAT
GCTTGCCACACTCACAGCATGGCTCCTTCACAACAAGAGAAGTATGACAT
TGTCATCGTGGGCGCTGGCCCCGTTGGCATTGTCCTGTCGCTCTGCATGT
CCCGCTGGGGCTACAAGGTGAAGCACATTGACAACCGTCCGGTGCCGACC
GCCACCGGTCGCGCCGATGGTATCCAGCCTCGTTCGACGGAGATCCTTCG
CAATCTGGGCTTGAAGCGCCAAATAATGGCCTTCAAGCCCGCTAAGGTGT
ACGACGTTGCTTTCTGGGACCCTCTCCCCGGCGGACAAGGTATCCACCGC
ACTGGCAGTTGGCCCAGCTGCCCCCGCTTTATCGATACAAGATACCCCTT
TACCACCCTGGTTCACCAGGGTAAGATCGAGCGCGTGTTCCTGGATGAGA
TCCAGAAGGCTGGTACCACAGTCGAGAGACCGTGGACCATCGTCGGTTTC
AAGAATGATGGCTTGGACGAGACCTACCCCGTCGAAGTGCAGCTTAAGAG
CATTGACACCAACGTAATCGAGACTGTTCGCACAAAGTATCTCTTCAGCG
GTGAAGGTGCTCGGAGTTTCATCAGACAGCAGCTTGGCATCCAGATCCAG
TACAAGGATCCCATCTCCTATGTCTGGGGTGTTATGGATGGTGTCGTGAG
GACCAACTTCCCCGACATCGAGCCCAAGGCTGGTCAGGGAATGAACACTG
CTTTCCACGATGCTCTGAACATGGCCTGGAAGCTCCACGCCGTTGAGTCT
GGTCTGGCTAAGCGCTCCATCCTCAGCACCTACGAGACCGAGCGCAAGGA
TATCGCCGAGACTCTGCTGAGCTTCGACAACAAGTACGCCGCCTTGTTTT
CCAAGCGTCGCCCTACTGCCGGTGAGGTCGGCGAGGCCAGCCACACCACT
GCTGCGGCTGGCGGAGAGGAAGACGAGTTCGTCAAGACCTTCAAGTCCTC
TTGTGAATTCACCAGTGGCTACGGTGTTGCCTACAAGCCTAATGTGTTCA
CCTGGGACGCTACCCACCCCGCTCAGTCCCCACTGTTCGACGTCCCAGGT
GTCCGCCTGACCCCTGGTCGCGCTTTCACGCCTACCACCGTCACCCGGTT
AGCGGACTCCAACCACGTCCACCTGGAACAGGAGATCCCTGCCAACGGTG
CGTTCCGTATCTTCATCTTTGCCGGTAAGCAGGACAAGACCAGCAAGGCG
ATCACTGATCTTGCTGCCAACCTCGAGAAGGAGCGCTCGTTCCTCTCCGT
GTACCGCCGCGCCGACATTGCCGACGTGTCGTTCTTCGAAAACCACCTGC
CTCACTCCAAGCTGTTCTCCATCTGCCTGGTCTACGCGGGCGAGAAGAAC
CAGATTGATGTGGACTCTATTCCCAAGATCCTCCGCGACTACCACCACCA
CCTCTATGCCGACAACATCCCCGACGTGCGCGTTCCCCAGGCCACGTACG
CCGCTCACGAGAAGCTGGGCTTCGACGTGGAGAAGGGCGGTGTTGTTGTT
ACTCGCCCTGACAGCCACGTTGCCTGTACCATTCAGCTGTCCGAGGGCAG
CGGCACTGTGGACGCCCTCAATGCCTTCTTCGGCTCGTTTGCAACGAAGC
CTTTAGGCCAGGACTCCCAGCAAAGCCGTCTGTAAACCAAGTGCACTATC
CACTCCGATGCCGGTTCTATCATGGTTATTCCCCGTGAGGACAACATGGT
CCGTCTGTATGTCCAGATCGCTTCGTCGGACGACCCCGACTTCGACCCCA
GGAAGACAGCAACCGCAGAGGATGTCCAGGCCACTGCTCGGAAGATCCTT
CAGCCGTACTGGGTGGAATGGGATCGTGTTGAATGGTACTCCGTGTACCC
GATCGGCCAAGGTATCTCTGAGAAGTATACTCTCGATGAGCGTGTTTTCA
TGGGTGGTGATGCTTGCCACACTCACAGCATGGCTCCTTCACAACAAGAG
AAGTATGACATTGTCATCGTGGGCGCTGGCCCCGTTGGCATTGTCCTGTC
GCTCTGCATGTCCCGCTGGGGCTACAAGGTGAAGCACATTGACAACCGTC
CGGTGCCGACCGCCACCGGTCGCGCCGATGGTATCCAGCCTCGTTCGACG
GAGATCCTTCGCAATCTGGGCTTGAAGCGCCAAATAATGGCCTTCAAGCC
CGCTAAGGTGTACGACGTTGCTTTCTGGGACCCTCTCCCCGGCGGACAAG
GTATCCACCGCACTGGCAGTTGGCCCAGCTGCCCCCGCTTTATCGATACA
AGATACCCCTTTACCACCCTGGTTCACCAGGGTAAGATCGAGCGCGTGTT
CCTGGATGAGATCCAGAAGGCTGGTACCACAGTCGAGAGACCGTGGACCA
TCGTCGGTTTCAAGAATGATGGCTTGGACGAGACCTACCCCGTCGAAGTG
CAGCTTAAGAGCATTGACACCAACGTAATCGAGACTGTTCGCACAAAGTA
TCTCTTCAGCGGTGAAGGTGCTCGGAGTTTCATCAGACAGCAGCTTGGCA
TCCAGATCCAGTACAAGGATCCCATCTCCTATGTCTGGGGTGTTATGGAT
GGTGTCGTGAGGACCAACTTCCCCGACATCGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008014-T1.utr3p1 | KJC3_008014-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008014-T1.utr5p1 | KJC3_008014-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036249 |
| DBxref | InterPro:IPR012941 |
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR002938 |
| DBxref | InterPro:IPR038220 |
| DBxref | PFAM:PF07976 |
| DBxref | PFAM:PF01494 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch6 | supercontig | ch6:686453..689052 - |
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