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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:695978..697870+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008018-T1 ID=KJC3_008018-T1|Name=KJC3_008018-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1893bp|location=Sequence derived from alignment at ch6:695978..697870+ (Aspergillus niger KJC3)
CCTGAAACGGATTAACTGCTTAATCCGCGCCGAGCCGAGGTCCGGGGTAC
TCTTTGCCTTGCTGGCCGGCCGGATGGAGCGTGACCGTCGCAAAGAGAGC
CAGCTTTCTTCCTTTTCTTCCCCTTCTGCCTTCAATCCGGATACGTATTT
CTTTTAACTATCCTCTCCGTAGCTACCTTACCTTCACATCTCAAAGTCGC
CGCTTCTTGCATATTCTGTCAAAGCGTCCAAGAGAACACGACTTCTACTC
CACTCTCCCCGCTTATTCTCCCCGCTCCTTTTCTCCGCTCCTTGCACTTC
ATCCGCGCCACCATGACCGCTTCTCCCTCCGCCGCTGAATCAATTCCAGA
GGAAATCAGAGCTCCGGAGCCTAAGCCCATCAATCAGACTATTGCTCAGA
TTCGCTCGCTCGCTGCTGGTGCTGCCGGTGGTGTGTGCGCCGTTGTTGTC
GGACATCCTTTCGATCTGGTGAAGGTGCGCCTGCAGACTGCAGAGAAGGG
CGTTTACTCTGGTGCCATCGATGTTGTGAAGAGGACTGTGGCCCGGGAGG
GTCTCGCTCGAGTAGGTTATCTTTATAGTTAGCGTTGGCGCAGTTGCTGA
TCGGAAAAGGGACTATATGCAGGTGTCTCTGCTCCCCTGGTGGGAGTCAC
GCCAATGTGTAAGCTTCTCTCCTCTTTTTGACCTTCGCAATACTAACAAC
GCGCGTGTACTCCAGTCGCTGTCAGTTTCTGGGTATGTCTACAAATTTGC
GAAATATAACTCCCTTGGCGCACATGGCTCACAGCTGATAGGGTTATGAT
GTCGGTAAAACGCTCGTCGGCAAAATGTCTGAAGTTCGCGTGGAGAACAA
CACCCCTCAATACACCATTGGCCAGATTTCAGCTGCTGGTTTCTTCTCTG
CCATTCCCATGACCTTGATCACGGCACCCTTCGAGCGCGTCAAAGTGCTC
CTTCAGATCCAGGGTCAGAACCCCCCGCCCCCGGGCCAGAAGCCCAAGTA
CTCTGGCGGTTTGGATGTGGTTCGGCAGCTATACCAGGAGGGTGGTATTC
GCAGTGTGTTCCGTGGCAGTGCAATGACCCTCGCTCGTGACGGCCCTGGC
TCTGCTGCGTACTTCGCCGCCTACGAGTATATCAAGCGCACTTTGACTCC
CAAGGATGCGCAAGGCAATGTCACTGGCGAGCTATCCATGCCAGCCGTCC
TGGCTGCCGGTGGTGCTGCTGGTATTGCCATGTGGATTCCTGTCTTCCCC
GTTGATACCATCAAGTCCCGTTTGCAGAGCGCGCCTGGTCGTCCCACGAT
CGGCGGCACGATTCGCACCGTTTACGCCAACGGTGGCTTTAAGGCTTTCT
TTCCCGGATTTGGTCCTGCTTTGGCAAGAGCTGTTCCTGCCAATGCTGCA
ACTTTGTATGTTATTTTACCCTGACATGCTCTGGGGCTGTCGTGGCTAAT
ATGTCAAACAGTGCGGGTGTTGAGCTGGCTCATCAGTTCATGACAAAGCT
CTTCGACTAAATGGATACATTGCGCGCTGCAGGTACAGTGGTGTAAGTCT
ATCGGTTAGTTGATTATTGTGGCGTTCGTTGTTTCGTCCTTCTGTGGAAG
CATTTTGCAAGCCTGGATATTCTCTGTTTTTGACTTAGACTAGACAATTT
CTGGTTGTCTGTACTAGTGCTAGGAATATCATATTAGCAGAGAATTTGTC
TCTGATTTAACCCAAAAGGCCTTGCTTGATTGTTTGACTGACAATAGGTT
AATACCTGTTCAGCGTCAGAATCGGTGCTGTTGCTTTGTACAGTGCCTTG
CAAGTTTGGATTACGCATTTCTATACTCCGTATAGTATTACCAGATGGGC
CGTCCAACCGTTGAATACATTAACTAGATAACTAACTAGCTCA back to topCoding sequence (CDS) from alignment at ch6:695978..697870+ >KJC3_008018-T1 ID=KJC3_008018-T1|Name=KJC3_008018-T1|organism=Aspergillus niger KJC3|type=CDS|length=4890bp|location=Sequence derived from alignment at ch6:695978..697870+ (Aspergillus niger KJC3)
ATGACCGCTTCTCCCTCCGCCGCTGAATCAATTCCAGAGGAAATCAGAGC
TCCGGAGCCTAAGCCCATCAATCAGACTATTGCTCAGATTCGCTCGCTCG
CTGCTGGTGCTGCCGGTGGTGTGTGCGCCGTTGTTGTCGGACATCCTTTC
GATCTGGTGAAGGTGCGCCTGCAGACTGCAGAGAAGGGCGTTTACTCTGG
TGCCATCGATGTTGTGAAGAGGACTGTGGCCCGGGAGGGTCTCGCTCGAG
GACTATATGCAGGTGTCTCTGCTCCCCTGGTGGGAGTCACGCCAATGTTC
GCTGTCAGTTTCTGGGGTTATGATGTCGGTAAAACGCTCGTCGGCAAAAT
GTCTGAAGTTCGCGTGGAGAACAACACCCCTCAATACACCATTGGCCAGA
TTTCAGCTGCTGGTTTCTTCTCTGCCATTCCCATGACCTTGATCACGGCA
CCCTTCGAGCGCGTCAAAGTGCTCCTTCAGATCCAGGGTCAGAACCCCCC
GCCCCCGGGCCAGAAGCCCAAGTACTCTGGCGGTTTGGATGTGGTTCGGC
AGCTATACCAGGAGGGTGGTATTCGCAGTGTGTTCCGTGGCAGTGCAATG
ACCCTCGCTCGTGACGGCCCTGGCTCTGCTGCGTACTTCGCCGCCTACGA
GTATATCAAGCGCACTTTGACTCCCAAGGATGCGCAAGGCAATGTCACTG
GCGAGCTATCCATGCCAGCCGTCCTGGCTGCCGGTGGTGCTGCTGGTATT
GCCATGTGGATTCCTGTCTTCCCCGTTGATACCATCAAGTCCCGTTTGCA
GAGCGCGCCTGGTCGTCCCACGATCGGCGGCACGATTCGCACCGTTTACG
CCAACGGTGGCTTTAAGGCTTTCTTTCCCGGATTTGGTCCTGCTTTGGCA
AGAGCTGTTCCTGCCAATGCTGCAACTTTTGCGGGTGTTGAGCTGGCTCA
TCAGTTCATGACAAAGCTCTTCGACTAAATGACCGCTTCTCCCTCCGCCG
CTGAATCAATTCCAGAGGAAATCAGAGCTCCGGAGCCTAAGCCCATCAAT
CAGACTATTGCTCAGATTCGCTCGCTCGCTGCTGGTGCTGCCGGTGGTGT
GTGCGCCGTTGTTGTCGGACATCCTTTCGATCTGGTGAAGGTGCGCCTGC
AGACTGCAGAGAAGGGCGTTTACTCTGGTGCCATCGATGTTGTGAAGAGG
ACTGTGGCCCGGGAGGGTCTCGCTCGAGGACTATATGCAGGTGTCTCTGC
TCCCCTGGTGGGAGTCACGCCAATGTTCGCTGTCAGTTTCTGGGGTTATG
ATGTCGGTAAAACGCTCGTCGGCAAAATGTCTGAAGTTCGCGTGGAGAAC
AACACCCCTCAATACACCATTGGCCAGATTTCAGCTGCTGGTTTCTTCTC
TGCCATTCCCATGACCTTGATCACGGCACCCTTCGAGCGCGTCAAAGTGC
TCCTTCAGATCCAGGGTCAGAACCCCCCGCCCCCGGGCCAGAAGCCCAAG
TACTCTGGCGGTTTGGATGTGGTTCGGCAGCTATACCAGGAGGGTGGTAT
TCGCAGTGTGTTCCGTGGCAGTGCAATGACCCTCGCTCGTGACGGCCCTG
GCTCTGCTGCGTACTTCGCCGCCTACGAGTATATCAAGCGCACTTTGACT
CCCAAGGATGCGCAAGGCAATGTCACTGGCGAGCTATCCATGCCAGCCGT
CCTGGCTGCCGGTGGTGCTGCTGGTATTGCCATGTGGATTCCTGTCTTCC
CCGTTGATACCATCAAGTCCCGTTTGCAGAGCGCGCCTGGTCGTCCCACG
ATCGGCGGCACGATTCGCACCGTTTACGCCAACGGTGGCTTTAAGGCTTT
CTTTCCCGGATTTGGTCCTGCTTTGGCAAGAGCTGTTCCTGCCAATGCTG
CAACTTTTGCGGGTGTTGAGCTGGCTCATCAGTTCATGACAAAGCTCTTC
GACTAAATGACCGCTTCTCCCTCCGCCGCTGAATCAATTCCAGAGGAAAT
CAGAGCTCCGGAGCCTAAGCCCATCAATCAGACTATTGCTCAGATTCGCT
CGCTCGCTGCTGGTGCTGCCGGTGGTGTGTGCGCCGTTGTTGTCGGACAT
CCTTTCGATCTGGTGAAGGTGCGCCTGCAGACTGCAGAGAAGGGCGTTTA
CTCTGGTGCCATCGATGTTGTGAAGAGGACTGTGGCCCGGGAGGGTCTCG
CTCGAGGACTATATGCAGGTGTCTCTGCTCCCCTGGTGGGAGTCACGCCA
ATGTTCGCTGTCAGTTTCTGGGGTTATGATGTCGGTAAAACGCTCGTCGG
CAAAATGTCTGAAGTTCGCGTGGAGAACAACACCCCTCAATACACCATTG
GCCAGATTTCAGCTGCTGGTTTCTTCTCTGCCATTCCCATGACCTTGATC
ACGGCACCCTTCGAGCGCGTCAAAGTGCTCCTTCAGATCCAGGGTCAGAA
CCCCCCGCCCCCGGGCCAGAAGCCCAAGTACTCTGGCGGTTTGGATGTGG
TTCGGCAGCTATACCAGGAGGGTGGTATTCGCAGTGTGTTCCGTGGCAGT
GCAATGACCCTCGCTCGTGACGGCCCTGGCTCTGCTGCGTACTTCGCCGC
CTACGAGTATATCAAGCGCACTTTGACTCCCAAGGATGCGCAAGGCAATG
TCACTGGCGAGCTATCCATGCCAGCCGTCCTGGCTGCCGGTGGTGCTGCT
GGTATTGCCATGTGGATTCCTGTCTTCCCCGTTGATACCATCAAGTCCCG
TTTGCAGAGCGCGCCTGGTCGTCCCACGATCGGCGGCACGATTCGCACCG
TTTACGCCAACGGTGGCTTTAAGGCTTTCTTTCCCGGATTTGGTCCTGCT
TTGGCAAGAGCTGTTCCTGCCAATGCTGCAACTTTTGCGGGTGTTGAGCT
GGCTCATCAGTTCATGACAAAGCTCTTCGACTAAATGACCGCTTCTCCCT
CCGCCGCTGAATCAATTCCAGAGGAAATCAGAGCTCCGGAGCCTAAGCCC
ATCAATCAGACTATTGCTCAGATTCGCTCGCTCGCTGCTGGTGCTGCCGG
TGGTGTGTGCGCCGTTGTTGTCGGACATCCTTTCGATCTGGTGAAGGTGC
GCCTGCAGACTGCAGAGAAGGGCGTTTACTCTGGTGCCATCGATGTTGTG
AAGAGGACTGTGGCCCGGGAGGGTCTCGCTCGAGGACTATATGCAGGTGT
CTCTGCTCCCCTGGTGGGAGTCACGCCAATGTTCGCTGTCAGTTTCTGGG
GTTATGATGTCGGTAAAACGCTCGTCGGCAAAATGTCTGAAGTTCGCGTG
GAGAACAACACCCCTCAATACACCATTGGCCAGATTTCAGCTGCTGGTTT
CTTCTCTGCCATTCCCATGACCTTGATCACGGCACCCTTCGAGCGCGTCA
AAGTGCTCCTTCAGATCCAGGGTCAGAACCCCCCGCCCCCGGGCCAGAAG
CCCAAGTACTCTGGCGGTTTGGATGTGGTTCGGCAGCTATACCAGGAGGG
TGGTATTCGCAGTGTGTTCCGTGGCAGTGCAATGACCCTCGCTCGTGACG
GCCCTGGCTCTGCTGCGTACTTCGCCGCCTACGAGTATATCAAGCGCACT
TTGACTCCCAAGGATGCGCAAGGCAATGTCACTGGCGAGCTATCCATGCC
AGCCGTCCTGGCTGCCGGTGGTGCTGCTGGTATTGCCATGTGGATTCCTG
TCTTCCCCGTTGATACCATCAAGTCCCGTTTGCAGAGCGCGCCTGGTCGT
CCCACGATCGGCGGCACGATTCGCACCGTTTACGCCAACGGTGGCTTTAA
GGCTTTCTTTCCCGGATTTGGTCCTGCTTTGGCAAGAGCTGTTCCTGCCA
ATGCTGCAACTTTTGCGGGTGTTGAGCTGGCTCATCAGTTCATGACAAAG
CTCTTCGACTAAATGACCGCTTCTCCCTCCGCCGCTGAATCAATTCCAGA
GGAAATCAGAGCTCCGGAGCCTAAGCCCATCAATCAGACTATTGCTCAGA
TTCGCTCGCTCGCTGCTGGTGCTGCCGGTGGTGTGTGCGCCGTTGTTGTC
GGACATCCTTTCGATCTGGTGAAGGTGCGCCTGCAGACTGCAGAGAAGGG
CGTTTACTCTGGTGCCATCGATGTTGTGAAGAGGACTGTGGCCCGGGAGG
GTCTCGCTCGAGGACTATATGCAGGTGTCTCTGCTCCCCTGGTGGGAGTC
ACGCCAATGTTCGCTGTCAGTTTCTGGGGTTATGATGTCGGTAAAACGCT
CGTCGGCAAAATGTCTGAAGTTCGCGTGGAGAACAACACCCCTCAATACA
CCATTGGCCAGATTTCAGCTGCTGGTTTCTTCTCTGCCATTCCCATGACC
TTGATCACGGCACCCTTCGAGCGCGTCAAAGTGCTCCTTCAGATCCAGGG
TCAGAACCCCCCGCCCCCGGGCCAGAAGCCCAAGTACTCTGGCGGTTTGG
ATGTGGTTCGGCAGCTATACCAGGAGGGTGGTATTCGCAGTGTGTTCCGT
GGCAGTGCAATGACCCTCGCTCGTGACGGCCCTGGCTCTGCTGCGTACTT
CGCCGCCTACGAGTATATCAAGCGCACTTTGACTCCCAAGGATGCGCAAG
GCAATGTCACTGGCGAGCTATCCATGCCAGCCGTCCTGGCTGCCGGTGGT
GCTGCTGGTATTGCCATGTGGATTCCTGTCTTCCCCGTTGATACCATCAA
GTCCCGTTTGCAGAGCGCGCCTGGTCGTCCCACGATCGGCGGCACGATTC
GCACCGTTTACGCCAACGGTGGCTTTAAGGCTTTCTTTCCCGGATTTGGT
CCTGCTTTGGCAAGAGCTGTTCCTGCCAATGCTGCAACTTTTGCGGGTGT
TGAGCTGGCTCATCAGTTCATGACAAAGCTCTTCGACTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008018-T1.utr5p1 | KJC3_008018-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008018-T1.utr3p1 | KJC3_008018-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023395 |
| DBxref | InterPro:IPR018108 |
| DBxref | PFAM:PF00153 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:695978..697870 + |
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