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KJC3_008021-T1, KJC3_008021-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008021-T1
Unique NameKJC3_008021-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:702868..703917+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008021-T1 ID=KJC3_008021-T1|Name=KJC3_008021-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1050bp|location=Sequence derived from alignment at ch6:702868..703917+ (Aspergillus niger KJC3)
AGTCACCATATTTGAGAAATCACTCACCACGCTCATCATGCATACATTCT
CAGGACCAAACCCCATTCCTACCGAGGTCATCATCAACATATTCGGGGAA
CTTTCTCTCCCGGATGCGCTTCACTTGGCCGCGACTTGCCGTCGGCTGCG
CCAGGTCTTGAGTGAACATACGCCTACCATTTACAAACGCCTACGCAGAA
AGATCCCATGTGAGCGCTATGCAAGAGTCCTACTAGCAGATCAAGGAGGC
CTGGCACTTTATTCTTCTTCAGTGACTATTCGGGATCTTTTACGATTGAG
ACGCAACTCTCGTATGGTGGAGAAAGCAATCGAGGTGTTTGATCGTGATA
TTACCCCAAACATTCGGAGTGAGTAGACAGATCAGTAAGCAGTCACATAA
ATAGATATTTGCTGAATTATATATTATACAGTCCCTCTCACGAGCATCGA
TGACGAATTCTACGGAGGAAAACCACGTCCGTTGCATTTACTTCCGTCAG
AACGTCATCGGTTCACTCGAAGCTACTACCAATTTTGGAGTCTTTCACTT
CTCGATCGACCATCTCGACAACAGCGATATCAGAGGATGTTGCTCAAGCA
CCTATACATGGTATATGAAATGGTTGATCTGAACCAGCCAATTGGCGACG
AATTGGTATCTTTCTTTGCTGATGAGAAACGATGCGAACTCTCTCAAGAA
CTGACCGACTATCTCCATTATCTCTACCATGACATTCATGGAGTTGACTA
CATCGATTTCTCGGGGCACAGCATTTCTATGCGTACGCGAGGTCATGCAG
CTATATGGGATCATTGCCAGCCTGATTTCAAGAAAATCGTTTGCTACCAG
TGGCGAGATCCAGAGAAGAAACCTGTCAAGGAGGAAGAGGTGTGGGAGCA
TACAACTGATGAGGAATGAATTCATGTTTCGATTGTTCGGATGGTTGCCA
ATCTAGGAGCTGTTAGAGGTACCTAGGACTTTCAACAATTTAGCCGCACT
TCCTAGCCTAGCTCGTATGTTCCTCAAAGGCTATTACATAGTTAGTCGGG
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Coding sequence (CDS) from alignment at ch6:702868..703917+

>KJC3_008021-T1 ID=KJC3_008021-T1|Name=KJC3_008021-T1|organism=Aspergillus niger KJC3|type=CDS|length=1638bp|location=Sequence derived from alignment at ch6:702868..703917+ (Aspergillus niger KJC3)
ATGCATACATTCTCAGGACCAAACCCCATTCCTACCGAGGTCATCATCAA
CATATTCGGGGAACTTTCTCTCCCGGATGCGCTTCACTTGGCCGCGACTT
GCCGTCGGCTGCGCCAGGTCTTGAGTGAACATACGCCTACCATTTACAAA
CGCCTACGCAGAAAGATCCCATGTGAGCGCTATGCAAGAGTCCTACTAGC
AGATCAAGGAGGCCTGGCACTTTATTCTTCTTCAGTGACTATTCGGGATC
TTTTACGATTGAGACGCAACTCTCGTATGGTGGAGAAAGCAATCGAGGTG
TTTGATCGTGATATTACCCCAAACATTCGGATCCCTCTCACGAGCATCGA
TGACGAATTCTACGGAGGAAAACCACGTCCGTTGCATTTACTTCCGTCAG
AACGTCATCGGTTCACTCGAAGCTACTACCAATTTTGGAGTCTTTCACTT
CTCGATCGACCATCTCGACAACAGCGATATCAGAGGATGTTGCTCAAGCA
CCTATACATGGTATATGAAATGGTTGATCTGAACCAGCCAATTGGCGACG
AATTGGTATCTTTCTTTGCTGATGAGAAACGATGCGAACTCTCTCAAGAA
CTGACCGACTATCTCCATTATCTCTACCATGACATTCATGGAGTTGACTA
CATCGATTTCTCGGGGCACAGCATTTCTATGCGTACGCGAGGTCATGCAG
CTATATGGGATCATTGCCAGCCTGATTTCAAGAAAATCGTTTGCTACCAG
TGGCGAGATCCAGAGAAGAAACCTGTCAAGGAGGAAGAGGTGTGGGAGCA
TACAACTGATGAGGAATGAATGCATACATTCTCAGGACCAAACCCCATTC
CTACCGAGGTCATCATCAACATATTCGGGGAACTTTCTCTCCCGGATGCG
CTTCACTTGGCCGCGACTTGCCGTCGGCTGCGCCAGGTCTTGAGTGAACA
TACGCCTACCATTTACAAACGCCTACGCAGAAAGATCCCATGTGAGCGCT
ATGCAAGAGTCCTACTAGCAGATCAAGGAGGCCTGGCACTTTATTCTTCT
TCAGTGACTATTCGGGATCTTTTACGATTGAGACGCAACTCTCGTATGGT
GGAGAAAGCAATCGAGGTGTTTGATCGTGATATTACCCCAAACATTCGGA
TCCCTCTCACGAGCATCGATGACGAATTCTACGGAGGAAAACCACGTCCG
TTGCATTTACTTCCGTCAGAACGTCATCGGTTCACTCGAAGCTACTACCA
ATTTTGGAGTCTTTCACTTCTCGATCGACCATCTCGACAACAGCGATATC
AGAGGATGTTGCTCAAGCACCTATACATGGTATATGAAATGGTTGATCTG
AACCAGCCAATTGGCGACGAATTGGTATCTTTCTTTGCTGATGAGAAACG
ATGCGAACTCTCTCAAGAACTGACCGACTATCTCCATTATCTCTACCATG
ACATTCATGGAGTTGACTACATCGATTTCTCGGGGCACAGCATTTCTATG
CGTACGCGAGGTCATGCAGCTATATGGGATCATTGCCAGCCTGATTTCAA
GAAAATCGTTTGCTACCAGTGGCGAGATCCAGAGAAGAAACCTGTCAAGG
AGGAAGAGGTGTGGGAGCATACAACTGATGAGGAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008021KJC3_008021Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008021-T1.utr5p1KJC3_008021-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008021-T1.exon1KJC3_008021-T1.exon1Aspergillus niger KJC3exon
KJC3_008021-T1.exon2KJC3_008021-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008021-T1.cdsKJC3_008021-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008021-T1.utr3p1KJC3_008021-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008021-T1KJC3_008021-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:702868..703917 +
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