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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:708795..709962+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008023-T1 ID=KJC3_008023-T1|Name=KJC3_008023-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1168bp|location=Sequence derived from alignment at ch6:708795..709962+ (Aspergillus niger KJC3)
CCGATCAAAGCTGGGAAGCTGAAAGCAACCAATATCACACTCCCTTCTAT
TCCCTGTCATGCATTCAAGCATCTTCCGAAACCCCGCCTCTACTTGAAGT
CGACCTCGACGGCTCAGCCGTACGCGGGTTTCCACCCTTCAGCCGAATCA
CGCAACATCTCTTGGCGCGTAGGGCGATAAGTCCAGGGAGCAGAGACAAT
ACTCTGTTGTATTGCGATCATGAGAGAAGCAAATCCAGACCGTATACATA
CAGACTATGTATGTACATCTGAGCCTTCTGTGACTAGTAAACCGCCCGTG
CTGCAATATACCATGGCACCGAAGTATGCAAGTGCTGGCGTTTCTAAGGA
TAGAAGGTGTGCTCGTTCTTCCTTCCACCCTCACAATCTCATCTCCCCAT
TGAGTATACCCCCCGCAATCAAAACAATGAATTATCTTTTCTTCCTCTTT
CTCGGGCTCTTCCAACTGGCATGTGCTGCCCGATCGGGCACATATGATGC
TGGCTGGCCGGTGGGCGATGCTACGTGGAAGCAAACTGATTCGGACTTCG
AGAAGGAAACAGGTATCAGCCAATACAAACTCTTTGATGTTGATGGCTTG
ATCTACAAGTACCAACTCGATATTGTTGTGAGCGAAGTGCAAGGAACTTT
TGGGAGTACATATTACTTCATCGATGCCACCGACCGATACTCTCTTACTG
TTTTCCTTCCTGGCGTGCATACAGTCAGCTACAACTCCGACGATCCTTAT
ATTCTGTCGGTGAAGGTCGTGGAAGGCTAGTGATAGTGAGTACAGCATAA
GTTTGACTGATAACGTCAGGCTGACAAGCACGATAAGATTCCATTATCAA
CGCTGCCCGCCACAGACCGTGAAAATTTTAGTCCAACTGGGCTGCTGATA
ACAACGAATCTTACTTCAACAGTCTGACGCCTAGCTTGGTACGTGCATTC
AACATGCAGTAGGGGGGTGGCCGCGCTATTTGAGACATAAGTGATGTTGT
ACCCACCGGGCGTTCGAATTTGAGATCCGCTCTTTCTTTTCGATAGCTAT
CTGCTACTATCACTATTGTTCTTATATCTCGAAGGCTGTTCGTGCCTCAA
AGATTGCATGTAGCCCCCATAGCAAGTGTCAACTCATAGTTGAATTACAT
CACAATCTTTCCATTCGA back to topCoding sequence (CDS) from alignment at ch6:708795..709962+ >KJC3_008023-T1 ID=KJC3_008023-T1|Name=KJC3_008023-T1|organism=Aspergillus niger KJC3|type=CDS|length=561bp|location=Sequence derived from alignment at ch6:708795..709962+ (Aspergillus niger KJC3)
ATGAGAGAAGCAAATCCAGACCGTATACATACAGACTATGTATGTACATC
TGAGCCTTCTGTGACTAGTAAACCGCCCGTGCTGCAATATACCATGGCAC
CGAAGTATGCAAGTGCTGGCGTTTCTAAGGATAGAAGGTGTGCTCGTTCT
TCCTTCCACCCTCACAATCTCATCTCCCCATTGAGTATACCCCCCGCAAT
CAAAACAATGAATTATCTTTTCTTCCTCTTTCTCGGGCTCTTCCAACTGG
CATGTGCTGCCCGATCGGGCACATATGATGCTGGCTGGCCGGTGGGCGAT
GCTACGTGGAAGCAAACTGATTCGGACTTCGAGAAGGAAACAGGTATCAG
CCAATACAAACTCTTTGATGTTGATGGCTTGATCTACAAGTACCAACTCG
ATATTGTTGTGAGCGAAGTGCAAGGAACTTTTGGGAGTACATATTACTTC
ATCGATGCCACCGACCGATACTCTCTTACTGTTTTCCTTCCTGGCGTGCA
TACAGTCAGCTACAACTCCGACGATCCTTATATTCTGTCGGTGAAGGTCG
TGGAAGGCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008023-T1.utr5p1 | KJC3_008023-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:708795..709962 + |
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