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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:736441..738368+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008030-T1 ID=KJC3_008030-T1|Name=KJC3_008030-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1928bp|location=Sequence derived from alignment at ch6:736441..738368+ (Aspergillus niger KJC3)
TGCTTGAGCAAGTCACCAGACATGGATTGATGAAATAACCCAAGCAATCC
AGCTGAACATAGACTTAGCCGGGTATGCTCACGCCCATACGGGTTCGTGG
TCGCAGGAGAAAATATCCTGATGATGGAATCTCCAAACCAAAACCCAGTG
GACCCAAAGGTGGGCGACCCATGATATCCCACCAGACAAAGCTCGAGTCA
TCTCAAGCGCGAAGTCACAAACGAGCTCGTCTACTCGTCGTCAAACCCAC
CAAACCCCGACAATCGATCCTGGAATCCCTCCCCGTCGAATTGATCGAGA
AGATCTTTCTATACTCACTAAATGTGAACTTCGCTCGCTGCTCCTCAGCC
CTAGGCGCAACCGTTTCGAGTGAACGCATATACAGAGCGTTGATCCTGTT
GGCATTTTGGGATGACTCGTCTGCTACGACGGCATTGAGAAACCATGCCT
CAGAAGTCGCTATATCCAGGATCCTCCGACCAGTCGACTACCACCCTCTC
AGCAATGCAGAGCGGAGACACCTCCAGGATACCATCCTTCGCTGCAAATG
GTGCACGATACAGCGGCTCCTAGCGCAGCTCCCGGACCTTATGAACCTTG
CCATTCAACGACACTGGTTGGGTGCAGGAATCGGCATGGGCCCACATGAC
CAAGAATCATTGACCCGATTCCTCGCTCAAAGAGAAGACACTCGCATCTT
CGAAGGAACCGACACCAACGGAGCCAATCACTACACCCTCACTGTAGCAC
CCTTGGTCTCAGTAACAGTCACCCACCATGAAAACGACCAATCGACTACC
TACCCAGTCCTAGGCGTCCTTCTAATCCCCAATAAACTCGTCGAAGACCT
CTCCACCCCTGATCACGTTACCTACCTCGAGCTCCTTCGCATAGCCAGCG
GTTTCAACCGCGCTGATCTCGTCAAACCGACTGTCTCTGTGTCCCATGAA
TCCCTGCAGATCGGCATCCGTAATGCCCTCATCGAAAACAACAAAGCCGC
CTTATCCATCCTCCTCAAAATCGATGAATATCATTTTCGCAGCGAGAACC
AATCCCTCAATCCAACCACTCGTGTTCCTTACATCCTCCCCGCAGAACAT
TTTCGCACGGCTGTCCGGTTCGCCCGGCATGACCCGACGTTCTTCCAGCT
GCTCGTGCGCGCTAGTGCGGAGTCTGTTCCGGCTGATGATGCGGAGATTA
CAGATTGGGCTGTGGGTTTGAACAATGCATTTGGGCACTGGCTGTTGGAA
CTGATGCTGCAATTGCCGCAGCAGATTGGAGCTGCGCATGCCAATCCGGC
GGAGGATGCAGTGTTTTATTTGGGCCGGGCGAATGGACAGAGAGAGCTCG
CAAGACGGTATTTGAGAGAGGTCTTGGGTTTGGAAGAGTTGGGATGTTGG
ATGGGAGAGACGATGTTTGACGCTTCCGCGTTGTGGAAAGTGAACGTCGA
CAGATCCTAGTGTAAAAGCCTGCTTTGATCGTGGGACTATATGCCCTGTC
ACGACGAGTCTTCGGACATACAGTATTCTCCAAGGAACACCCCCAGAGTA
CGGATTGGGAGCCCACCTGCCGTGATCACAAACCTAAGGACGTGGCCAGG
TGATTGGCAAAGACGACTGTGGGACTTGGCAGTTTCAGGTGCTTAACACG
TTCGAAACTGAAACAGCCTTCCAAAAAACGAACCATGTCGGTGCTATCTT
CGAGGCTTTGTAGCATTGGGAGGGGGAAAGGGCACCATGACAAGATAAGC
GAGCAACAATTGAAGTAAAGTAGAACAAGTATAGCAAACAGGCAACATCA
CGTAACTAACGTGAGGGTGGCCGCACGCTATTATACCCCCAATTTAGAAT
CATCATCAGTCCTCAACTCAAAGACTCATATATCATATTGTCGACGATAT
TGAATACAATAAACGATCCAATGGAGAG back to topCoding sequence (CDS) from alignment at ch6:736441..738368+ >KJC3_008030-T1 ID=KJC3_008030-T1|Name=KJC3_008030-T1|organism=Aspergillus niger KJC3|type=CDS|length=1386bp|location=Sequence derived from alignment at ch6:736441..738368+ (Aspergillus niger KJC3)
ATGCTCACGCCCATACGGGTTCGTGGTCGCAGGAGAAAATATCCTGATGA
TGGAATCTCCAAACCAAAACCCAGTGGACCCAAAGGTGGGCGACCCATGA
TATCCCACCAGACAAAGCTCGAGTCATCTCAAGCGCGAAGTCACAAACGA
GCTCGTCTACTCGTCGTCAAACCCACCAAACCCCGACAATCGATCCTGGA
ATCCCTCCCCGTCGAATTGATCGAGAAGATCTTTCTATACTCACTAAATG
TGAACTTCGCTCGCTGCTCCTCAGCCCTAGGCGCAACCGTTTCGAGTGAA
CGCATATACAGAGCGTTGATCCTGTTGGCATTTTGGGATGACTCGTCTGC
TACGACGGCATTGAGAAACCATGCCTCAGAAGTCGCTATATCCAGGATCC
TCCGACCAGTCGACTACCACCCTCTCAGCAATGCAGAGCGGAGACACCTC
CAGGATACCATCCTTCGCTGCAAATGGTGCACGATACAGCGGCTCCTAGC
GCAGCTCCCGGACCTTATGAACCTTGCCATTCAACGACACTGGTTGGGTG
CAGGAATCGGCATGGGCCCACATGACCAAGAATCATTGACCCGATTCCTC
GCTCAAAGAGAAGACACTCGCATCTTCGAAGGAACCGACACCAACGGAGC
CAATCACTACACCCTCACTGTAGCACCCTTGGTCTCAGTAACAGTCACCC
ACCATGAAAACGACCAATCGACTACCTACCCAGTCCTAGGCGTCCTTCTA
ATCCCCAATAAACTCGTCGAAGACCTCTCCACCCCTGATCACGTTACCTA
CCTCGAGCTCCTTCGCATAGCCAGCGGTTTCAACCGCGCTGATCTCGTCA
AACCGACTGTCTCTGTGTCCCATGAATCCCTGCAGATCGGCATCCGTAAT
GCCCTCATCGAAAACAACAAAGCCGCCTTATCCATCCTCCTCAAAATCGA
TGAATATCATTTTCGCAGCGAGAACCAATCCCTCAATCCAACCACTCGTG
TTCCTTACATCCTCCCCGCAGAACATTTTCGCACGGCTGTCCGGTTCGCC
CGGCATGACCCGACGTTCTTCCAGCTGCTCGTGCGCGCTAGTGCGGAGTC
TGTTCCGGCTGATGATGCGGAGATTACAGATTGGGCTGTGGGTTTGAACA
ATGCATTTGGGCACTGGCTGTTGGAACTGATGCTGCAATTGCCGCAGCAG
ATTGGAGCTGCGCATGCCAATCCGGCGGAGGATGCAGTGTTTTATTTGGG
CCGGGCGAATGGACAGAGAGAGCTCGCAAGACGGTATTTGAGAGAGGTCT
TGGGTTTGGAAGAGTTGGGATGTTGGATGGGAGAGACGATGTTTGACGCT
TCCGCGTTGTGGAAAGTGAACGTCGACAGATCCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008030-T1.utr5p1 | KJC3_008030-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008030-T1.utr3p1 | KJC3_008030-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.6 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:736441..738368 + |
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