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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:754050..756361+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008035-T1 ID=KJC3_008035-T1|Name=KJC3_008035-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2312bp|location=Sequence derived from alignment at ch6:754050..756361+ (Aspergillus niger KJC3)
GCTTTACCCGCTCGATCATCTCTTTTGCCTTCTCGATCAGTCGGTCTGTC
ACCATGGCCGTACTCGAAAAGTTTCGCGAGGCCTTTGGCCGTAACCCTTC
TATTACCGAGGACTCCGGCAACAATGTTGCCATGAACACTGTCGAGGAAA
CTAAGCGGGATCCCATTGCTGATGAGGCAGTCCGTGGTCCTGAAGAGTCT
GAGGAATCTGTTTCCGAGGATGCCTCTTCAACGCACCTCCAGACTGGTGT
TCACGACGTCGAGGCCATCACCAAGTCCTGGACCAAATGGTCACTGATCG
CCGTTTTTGCCAAGTATGTGGCCTCCTTTGGTATCTGTATTTCCATTATA
TCCTCGCTAACTCTTTTTCTTCTTCTCTATTAGCATCTGGCTCCTATACT
TTGTAAATGCTTTTCAGTCCTCTATTCTTTACAATCTGCTCCCCTATGTC
ACCAGTTCTTGGGAGTCCCACTCCCTCCTGAACGTCATCTATGTGGTTGC
CGACTGCATGTCGGCCGCCGTGTATATCCCTCTGGCCAAAATCATGGACG
TGACTGGCCGTGCTGAAGGTTTCCTGACCATGGCTGTCTTTGCTACACTG
GGACTGATTTTGATGGCCACCTGCCACAACCTTCCCACCTTCTGTGCTGC
CTATGTGAGTATTCTTTCACGGCTAATCAAGTGAAAGTTCTGTTCGTGCT
AATCACTCCATTCACTAGGTATTCTACACCATTGGCTTCGGAGGCATGAC
CTACTGCGTGGATGTCATCACTGCTGATGCCTCCAAGCTGAAGAACCGGG
GTCTGGCCTACGCATTTACCTCCTCGCCTTACATCATTACGGCCTTTGCT
GGTCCTAAGGCTTCGGATGACTTCCACCTTAGCTGGCGCTGGGGCTTTGG
CATGTTCGCCATCATTTTTCCTGTCGTCGCTGCCCCTTTGTACTTCATCC
TGAAGCATAACCTGAAGCGCGCGCAGCAGCAGGGTTTGGTCGTCCCCAAC
CGCGACACCCGCACCTGGTACCAGCTAGTCTGGTTTTACTTCATCGAGTT
TGATAGTACGCACTTTTGCCTCATACCTCCAGAATATCATCTTAATCTAA
CTTACCCTCCAGTTGTCGGTGTTCTCCTTTTCTCCATCGGTCTCTGTGTC
TTCTTCCTTCCCTTCGATATCTCCTCTTACGCCCCCGACGGCTGGGCCTC
GGGCTACATTATCGCAATGATCGTCGTCGGTGTCGTGATGCTAGTTATCT
TCTGCCTGTACGAATGGTTCATCGCGCCCGTGCCGCTTTTCAAGTTCGGC
TTCCTCTTCAACCGTACCGTTATCGGCGCCTGTCTCCTCGACGCCACCTA
CCAGCTCTCATACTACTGCTGGGACAACTACTTCACCTCTTTCCTGCAAG
TTGTCAACGACTTGACTGTTGCCGAAGCAGGGTACGTCAGTGACACCTTC
GATGTCGTCTCCGGTGTGCTGCTCCTTTTCGTCGGTTGGTTGATCAGCAA
GACCGGCCGCTTCAAGTGGCTCCTCTACATCTCGGTGCCTTTGTACATCT
TCGCTCAGGGTCTGATGATCTACTTCCGTCGCCCTAACCAATCCGTCGGC
TACCTCGTCATGTGCCAGATCTTCATTTCCATCGGTGGTAGTATCTTCAT
CATTATCGAGCAGCTCGCTATTTTGGCCGCCGTCGACCACCAGCACGTCG
CTGCTGCCCTGGCCCTCCTCAACGTTGTTGGTACAATCGGTGACGCTATC
GGTGCCACCATCTCCGGCGCTATCTGGGATAACACCTTCGAGAAGGCGCT
CATTCGCTATCTGCCTGAATCAGCCATGTCCAACCTCGAGAACATCTACG
AGGACCTTGATACTCAGCTGAGTTACCCGACTGGTAGTGTTACCCGCATT
GCCATCCAGCATGCCTATGGATATGCGCAGACGCGCATGTTGGCTGTTGG
AACGGGACTCATGGCTCTCTCGTTCATCTGGATCGTTATGATCAAGAACA
TTAATGTTGCCAAGGTCAAGCAGGTCTCGGGTATGGTTTTCTAGACTATC
GATCGCTGCGTGTACATACCATATACATACATATATCGGTTGAACAGAAC
TCTCATCCTGAATGCACCATACTACCTTGTCTTTGCTGATGAAGATAACG
GTGTAGATGTGGGGCCGGTGCACATCACCGCCCATTTTTGTTGTTTATCT
CGCTCATACCCATTTTCCCTTTCCATACCCCTGTGTGCCTGCTGGTGCAT
GGACATCTGCTTGATATATGCCCGCTACTTTGTATTGCATTAGTATAAAA
GTTATACTCCAC back to topCoding sequence (CDS) from alignment at ch6:754050..756361+ >KJC3_008035-T1 ID=KJC3_008035-T1|Name=KJC3_008035-T1|organism=Aspergillus niger KJC3|type=CDS|length=7200bp|location=Sequence derived from alignment at ch6:754050..756361+ (Aspergillus niger KJC3)
ATGGCCGTACTCGAAAAGTTTCGCGAGGCCTTTGGCCGTAACCCTTCTAT
TACCGAGGACTCCGGCAACAATGTTGCCATGAACACTGTCGAGGAAACTA
AGCGGGATCCCATTGCTGATGAGGCAGTCCGTGGTCCTGAAGAGTCTGAG
GAATCTGTTTCCGAGGATGCCTCTTCAACGCACCTCCAGACTGGTGTTCA
CGACGTCGAGGCCATCACCAAGTCCTGGACCAAATGGTCACTGATCGCCG
TTTTTGCCAACATCTGGCTCCTATACTTTGTAAATGCTTTTCAGTCCTCT
ATTCTTTACAATCTGCTCCCCTATGTCACCAGTTCTTGGGAGTCCCACTC
CCTCCTGAACGTCATCTATGTGGTTGCCGACTGCATGTCGGCCGCCGTGT
ATATCCCTCTGGCCAAAATCATGGACGTGACTGGCCGTGCTGAAGGTTTC
CTGACCATGGCTGTCTTTGCTACACTGGGACTGATTTTGATGGCCACCTG
CCACAACCTTCCCACCTTCTGTGCTGCCTATGTATTCTACACCATTGGCT
TCGGAGGCATGACCTACTGCGTGGATGTCATCACTGCTGATGCCTCCAAG
CTGAAGAACCGGGGTCTGGCCTACGCATTTACCTCCTCGCCTTACATCAT
TACGGCCTTTGCTGGTCCTAAGGCTTCGGATGACTTCCACCTTAGCTGGC
GCTGGGGCTTTGGCATGTTCGCCATCATTTTTCCTGTCGTCGCTGCCCCT
TTGTACTTCATCCTGAAGCATAACCTGAAGCGCGCGCAGCAGCAGGGTTT
GGTCGTCCCCAACCGCGACACCCGCACCTGGTACCAGCTAGTCTGGTTTT
ACTTCATCGAGTTTGATATTGTCGGTGTTCTCCTTTTCTCCATCGGTCTC
TGTGTCTTCTTCCTTCCCTTCGATATCTCCTCTTACGCCCCCGACGGCTG
GGCCTCGGGCTACATTATCGCAATGATCGTCGTCGGTGTCGTGATGCTAG
TTATCTTCTGCCTGTACGAATGGTTCATCGCGCCCGTGCCGCTTTTCAAG
TTCGGCTTCCTCTTCAACCGTACCGTTATCGGCGCCTGTCTCCTCGACGC
CACCTACCAGCTCTCATACTACTGCTGGGACAACTACTTCACCTCTTTCC
TGCAAGTTGTCAACGACTTGACTGTTGCCGAAGCAGGGTACGTCAGTGAC
ACCTTCGATGTCGTCTCCGGTGTGCTGCTCCTTTTCGTCGGTTGGTTGAT
CAGCAAGACCGGCCGCTTCAAGTGGCTCCTCTACATCTCGGTGCCTTTGT
ACATCTTCGCTCAGGGTCTGATGATCTACTTCCGTCGCCCTAACCAATCC
GTCGGCTACCTCGTCATGTGCCAGATCTTCATTTCCATCGGTGGTAGTAT
CTTCATCATTATCGAGCAGCTCGCTATTTTGGCCGCCGTCGACCACCAGC
ACGTCGCTGCTGCCCTGGCCCTCCTCAACGTTGTTGGTACAATCGGTGAC
GCTATCGGTGCCACCATCTCCGGCGCTATCTGGGATAACACCTTCGAGAA
GGCGCTCATTCGCTATCTGCCTGAATCAGCCATGTCCAACCTCGAGAACA
TCTACGAGGACCTTGATACTCAGCTGAGTTACCCGACTGGTAGTGTTACC
CGCATTGCCATCCAGCATGCCTATGGATATGCGCAGACGCGCATGTTGGC
TGTTGGAACGGGACTCATGGCTCTCTCGTTCATCTGGATCGTTATGATCA
AGAACATTAATGTTGCCAAGGTCAAGCAGGTCTCGGGTATGGTTTTCTAG
ATGGCCGTACTCGAAAAGTTTCGCGAGGCCTTTGGCCGTAACCCTTCTAT
TACCGAGGACTCCGGCAACAATGTTGCCATGAACACTGTCGAGGAAACTA
AGCGGGATCCCATTGCTGATGAGGCAGTCCGTGGTCCTGAAGAGTCTGAG
GAATCTGTTTCCGAGGATGCCTCTTCAACGCACCTCCAGACTGGTGTTCA
CGACGTCGAGGCCATCACCAAGTCCTGGACCAAATGGTCACTGATCGCCG
TTTTTGCCAACATCTGGCTCCTATACTTTGTAAATGCTTTTCAGTCCTCT
ATTCTTTACAATCTGCTCCCCTATGTCACCAGTTCTTGGGAGTCCCACTC
CCTCCTGAACGTCATCTATGTGGTTGCCGACTGCATGTCGGCCGCCGTGT
ATATCCCTCTGGCCAAAATCATGGACGTGACTGGCCGTGCTGAAGGTTTC
CTGACCATGGCTGTCTTTGCTACACTGGGACTGATTTTGATGGCCACCTG
CCACAACCTTCCCACCTTCTGTGCTGCCTATGTATTCTACACCATTGGCT
TCGGAGGCATGACCTACTGCGTGGATGTCATCACTGCTGATGCCTCCAAG
CTGAAGAACCGGGGTCTGGCCTACGCATTTACCTCCTCGCCTTACATCAT
TACGGCCTTTGCTGGTCCTAAGGCTTCGGATGACTTCCACCTTAGCTGGC
GCTGGGGCTTTGGCATGTTCGCCATCATTTTTCCTGTCGTCGCTGCCCCT
TTGTACTTCATCCTGAAGCATAACCTGAAGCGCGCGCAGCAGCAGGGTTT
GGTCGTCCCCAACCGCGACACCCGCACCTGGTACCAGCTAGTCTGGTTTT
ACTTCATCGAGTTTGATATTGTCGGTGTTCTCCTTTTCTCCATCGGTCTC
TGTGTCTTCTTCCTTCCCTTCGATATCTCCTCTTACGCCCCCGACGGCTG
GGCCTCGGGCTACATTATCGCAATGATCGTCGTCGGTGTCGTGATGCTAG
TTATCTTCTGCCTGTACGAATGGTTCATCGCGCCCGTGCCGCTTTTCAAG
TTCGGCTTCCTCTTCAACCGTACCGTTATCGGCGCCTGTCTCCTCGACGC
CACCTACCAGCTCTCATACTACTGCTGGGACAACTACTTCACCTCTTTCC
TGCAAGTTGTCAACGACTTGACTGTTGCCGAAGCAGGGTACGTCAGTGAC
ACCTTCGATGTCGTCTCCGGTGTGCTGCTCCTTTTCGTCGGTTGGTTGAT
CAGCAAGACCGGCCGCTTCAAGTGGCTCCTCTACATCTCGGTGCCTTTGT
ACATCTTCGCTCAGGGTCTGATGATCTACTTCCGTCGCCCTAACCAATCC
GTCGGCTACCTCGTCATGTGCCAGATCTTCATTTCCATCGGTGGTAGTAT
CTTCATCATTATCGAGCAGCTCGCTATTTTGGCCGCCGTCGACCACCAGC
ACGTCGCTGCTGCCCTGGCCCTCCTCAACGTTGTTGGTACAATCGGTGAC
GCTATCGGTGCCACCATCTCCGGCGCTATCTGGGATAACACCTTCGAGAA
GGCGCTCATTCGCTATCTGCCTGAATCAGCCATGTCCAACCTCGAGAACA
TCTACGAGGACCTTGATACTCAGCTGAGTTACCCGACTGGTAGTGTTACC
CGCATTGCCATCCAGCATGCCTATGGATATGCGCAGACGCGCATGTTGGC
TGTTGGAACGGGACTCATGGCTCTCTCGTTCATCTGGATCGTTATGATCA
AGAACATTAATGTTGCCAAGGTCAAGCAGGTCTCGGGTATGGTTTTCTAG
ATGGCCGTACTCGAAAAGTTTCGCGAGGCCTTTGGCCGTAACCCTTCTAT
TACCGAGGACTCCGGCAACAATGTTGCCATGAACACTGTCGAGGAAACTA
AGCGGGATCCCATTGCTGATGAGGCAGTCCGTGGTCCTGAAGAGTCTGAG
GAATCTGTTTCCGAGGATGCCTCTTCAACGCACCTCCAGACTGGTGTTCA
CGACGTCGAGGCCATCACCAAGTCCTGGACCAAATGGTCACTGATCGCCG
TTTTTGCCAACATCTGGCTCCTATACTTTGTAAATGCTTTTCAGTCCTCT
ATTCTTTACAATCTGCTCCCCTATGTCACCAGTTCTTGGGAGTCCCACTC
CCTCCTGAACGTCATCTATGTGGTTGCCGACTGCATGTCGGCCGCCGTGT
ATATCCCTCTGGCCAAAATCATGGACGTGACTGGCCGTGCTGAAGGTTTC
CTGACCATGGCTGTCTTTGCTACACTGGGACTGATTTTGATGGCCACCTG
CCACAACCTTCCCACCTTCTGTGCTGCCTATGTATTCTACACCATTGGCT
TCGGAGGCATGACCTACTGCGTGGATGTCATCACTGCTGATGCCTCCAAG
CTGAAGAACCGGGGTCTGGCCTACGCATTTACCTCCTCGCCTTACATCAT
TACGGCCTTTGCTGGTCCTAAGGCTTCGGATGACTTCCACCTTAGCTGGC
GCTGGGGCTTTGGCATGTTCGCCATCATTTTTCCTGTCGTCGCTGCCCCT
TTGTACTTCATCCTGAAGCATAACCTGAAGCGCGCGCAGCAGCAGGGTTT
GGTCGTCCCCAACCGCGACACCCGCACCTGGTACCAGCTAGTCTGGTTTT
ACTTCATCGAGTTTGATATTGTCGGTGTTCTCCTTTTCTCCATCGGTCTC
TGTGTCTTCTTCCTTCCCTTCGATATCTCCTCTTACGCCCCCGACGGCTG
GGCCTCGGGCTACATTATCGCAATGATCGTCGTCGGTGTCGTGATGCTAG
TTATCTTCTGCCTGTACGAATGGTTCATCGCGCCCGTGCCGCTTTTCAAG
TTCGGCTTCCTCTTCAACCGTACCGTTATCGGCGCCTGTCTCCTCGACGC
CACCTACCAGCTCTCATACTACTGCTGGGACAACTACTTCACCTCTTTCC
TGCAAGTTGTCAACGACTTGACTGTTGCCGAAGCAGGGTACGTCAGTGAC
ACCTTCGATGTCGTCTCCGGTGTGCTGCTCCTTTTCGTCGGTTGGTTGAT
CAGCAAGACCGGCCGCTTCAAGTGGCTCCTCTACATCTCGGTGCCTTTGT
ACATCTTCGCTCAGGGTCTGATGATCTACTTCCGTCGCCCTAACCAATCC
GTCGGCTACCTCGTCATGTGCCAGATCTTCATTTCCATCGGTGGTAGTAT
CTTCATCATTATCGAGCAGCTCGCTATTTTGGCCGCCGTCGACCACCAGC
ACGTCGCTGCTGCCCTGGCCCTCCTCAACGTTGTTGGTACAATCGGTGAC
GCTATCGGTGCCACCATCTCCGGCGCTATCTGGGATAACACCTTCGAGAA
GGCGCTCATTCGCTATCTGCCTGAATCAGCCATGTCCAACCTCGAGAACA
TCTACGAGGACCTTGATACTCAGCTGAGTTACCCGACTGGTAGTGTTACC
CGCATTGCCATCCAGCATGCCTATGGATATGCGCAGACGCGCATGTTGGC
TGTTGGAACGGGACTCATGGCTCTCTCGTTCATCTGGATCGTTATGATCA
AGAACATTAATGTTGCCAAGGTCAAGCAGGTCTCGGGTATGGTTTTCTAG
ATGGCCGTACTCGAAAAGTTTCGCGAGGCCTTTGGCCGTAACCCTTCTAT
TACCGAGGACTCCGGCAACAATGTTGCCATGAACACTGTCGAGGAAACTA
AGCGGGATCCCATTGCTGATGAGGCAGTCCGTGGTCCTGAAGAGTCTGAG
GAATCTGTTTCCGAGGATGCCTCTTCAACGCACCTCCAGACTGGTGTTCA
CGACGTCGAGGCCATCACCAAGTCCTGGACCAAATGGTCACTGATCGCCG
TTTTTGCCAACATCTGGCTCCTATACTTTGTAAATGCTTTTCAGTCCTCT
ATTCTTTACAATCTGCTCCCCTATGTCACCAGTTCTTGGGAGTCCCACTC
CCTCCTGAACGTCATCTATGTGGTTGCCGACTGCATGTCGGCCGCCGTGT
ATATCCCTCTGGCCAAAATCATGGACGTGACTGGCCGTGCTGAAGGTTTC
CTGACCATGGCTGTCTTTGCTACACTGGGACTGATTTTGATGGCCACCTG
CCACAACCTTCCCACCTTCTGTGCTGCCTATGTATTCTACACCATTGGCT
TCGGAGGCATGACCTACTGCGTGGATGTCATCACTGCTGATGCCTCCAAG
CTGAAGAACCGGGGTCTGGCCTACGCATTTACCTCCTCGCCTTACATCAT
TACGGCCTTTGCTGGTCCTAAGGCTTCGGATGACTTCCACCTTAGCTGGC
GCTGGGGCTTTGGCATGTTCGCCATCATTTTTCCTGTCGTCGCTGCCCCT
TTGTACTTCATCCTGAAGCATAACCTGAAGCGCGCGCAGCAGCAGGGTTT
GGTCGTCCCCAACCGCGACACCCGCACCTGGTACCAGCTAGTCTGGTTTT
ACTTCATCGAGTTTGATATTGTCGGTGTTCTCCTTTTCTCCATCGGTCTC
TGTGTCTTCTTCCTTCCCTTCGATATCTCCTCTTACGCCCCCGACGGCTG
GGCCTCGGGCTACATTATCGCAATGATCGTCGTCGGTGTCGTGATGCTAG
TTATCTTCTGCCTGTACGAATGGTTCATCGCGCCCGTGCCGCTTTTCAAG
TTCGGCTTCCTCTTCAACCGTACCGTTATCGGCGCCTGTCTCCTCGACGC
CACCTACCAGCTCTCATACTACTGCTGGGACAACTACTTCACCTCTTTCC
TGCAAGTTGTCAACGACTTGACTGTTGCCGAAGCAGGGTACGTCAGTGAC
ACCTTCGATGTCGTCTCCGGTGTGCTGCTCCTTTTCGTCGGTTGGTTGAT
CAGCAAGACCGGCCGCTTCAAGTGGCTCCTCTACATCTCGGTGCCTTTGT
ACATCTTCGCTCAGGGTCTGATGATCTACTTCCGTCGCCCTAACCAATCC
GTCGGCTACCTCGTCATGTGCCAGATCTTCATTTCCATCGGTGGTAGTAT
CTTCATCATTATCGAGCAGCTCGCTATTTTGGCCGCCGTCGACCACCAGC
ACGTCGCTGCTGCCCTGGCCCTCCTCAACGTTGTTGGTACAATCGGTGAC
GCTATCGGTGCCACCATCTCCGGCGCTATCTGGGATAACACCTTCGAGAA
GGCGCTCATTCGCTATCTGCCTGAATCAGCCATGTCCAACCTCGAGAACA
TCTACGAGGACCTTGATACTCAGCTGAGTTACCCGACTGGTAGTGTTACC
CGCATTGCCATCCAGCATGCCTATGGATATGCGCAGACGCGCATGTTGGC
TGTTGGAACGGGACTCATGGCTCTCTCGTTCATCTGGATCGTTATGATCA
AGAACATTAATGTTGCCAAGGTCAAGCAGGTCTCGGGTATGGTTTTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008035-T1.utr5p1 | KJC3_008035-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008035-T1.utr3p1 | KJC3_008035-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.6 |
| Note | SMCOG1005: EmrB/QacA |
| Note | SMCOG1005:Drug resistance transporter |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:754050..756361 + |
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