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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:759404..760533+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008038-T1 ID=KJC3_008038-T1|Name=KJC3_008038-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1130bp|location=Sequence derived from alignment at ch6:759404..760533+ (Aspergillus niger KJC3)
CCTGACTGCGCCATCGGTCTGGATCACCTGCCGTAAATTTCCTCCGCGAT
AATCGATCTACAACCACTACAATTGCACTCGCAATTGCGTCCTTAAAGGC
CTGCTTGAGTCTGCCGACTTTTTCCATATAATATTTACCATTACACATTA
CCCGAAAAGTTGAATGGGACAACCCTTCACCAACAAAATGACCACACCAC
TTTCGACGGATGATCTTCAGTCACGCAGAGAAGCCGACTACGAGCGGTTC
AAAACCGCCGCCGCATACACCTTTCTCATTGCATCGCCTGTTCTCATTGC
TCTACCACCTAGAAAGCTCGATAACCTGACGGTCCTTCTCACCAGCGCTT
TCTGTGTTTCGGCAAACCACCTCACCCGCGAACACACCGGGCGTAGTATC
GTGGATCGGATCGAGGCCCGCATCTCAAGGAACCCTATTGCAGCATTGTC
GGATCTACCAAGCCAACGGGCACAGGAGATACAGGCCAAGTTAAAGGCAG
CGAGGGATGCACAGATCCGGGATGGATCAGCAGTTGGCGAGGAACTGGAG
AGGCTGAAGGCTAGGCAAGCACAGGAGAAGCCGGCTTTAGAGAAAATCTG
GATGGGCGGCGAGACGGAGGGGTGGAAGGAAAGAAGAATAAGGGAGGAAC
AGAAGGCCTTGGAGGAGGGGAAAGGATATGGTGACCTGATCAAGGAGCAT
ATATGGGATGTATGGAATTGGGGCCAGAAGGAAGAAGGGAAGGAACCGAA
AGAGGGAAAGTAGTTGAGATTTGGAAAGTGAAAACCGTTTTGCAGGGCCT
GTCAATGGCCTTTTCCTTTAGCGGGCTTGCATGATATAGGCGGCGTTGAT
GATATGGGCTGGGTTTACATGGTTTCTCGTTTTATGTAGTTATAGTTGTC
CGTCCTACCTTATGTATAAAAGCTTTGTACATTAGTATATCATCGATCTG
ATTACCTCGTGTCATTCCTACCAGGTGAAAAGTTATGTCATATAATGCTG
TCCAGCTGGTTGAGAATCAAAATGGCTGCAAATTCCTCAGACGGCAGGTT
GACGACAGATCTGCTGTCACTCAAACATGATTGCGCCCTGGGCAAGCATA
TGCAGCTTAGGTTTATATAACGCACCGGTC back to topCoding sequence (CDS) from alignment at ch6:759404..760533+ >KJC3_008038-T1 ID=KJC3_008038-T1|Name=KJC3_008038-T1|organism=Aspergillus niger KJC3|type=CDS|length=600bp|location=Sequence derived from alignment at ch6:759404..760533+ (Aspergillus niger KJC3)
ATGGGACAACCCTTCACCAACAAAATGACCACACCACTTTCGACGGATGA
TCTTCAGTCACGCAGAGAAGCCGACTACGAGCGGTTCAAAACCGCCGCCG
CATACACCTTTCTCATTGCATCGCCTGTTCTCATTGCTCTACCACCTAGA
AAGCTCGATAACCTGACGGTCCTTCTCACCAGCGCTTTCTGTGTTTCGGC
AAACCACCTCACCCGCGAACACACCGGGCGTAGTATCGTGGATCGGATCG
AGGCCCGCATCTCAAGGAACCCTATTGCAGCATTGTCGGATCTACCAAGC
CAACGGGCACAGGAGATACAGGCCAAGTTAAAGGCAGCGAGGGATGCACA
GATCCGGGATGGATCAGCAGTTGGCGAGGAACTGGAGAGGCTGAAGGCTA
GGCAAGCACAGGAGAAGCCGGCTTTAGAGAAAATCTGGATGGGCGGCGAG
ACGGAGGGGTGGAAGGAAAGAAGAATAAGGGAGGAACAGAAGGCCTTGGA
GGAGGGGAAAGGATATGGTGACCTGATCAAGGAGCATATATGGGATGTAT
GGAATTGGGGCCAGAAGGAAGAAGGGAAGGAACCGAAAGAGGGAAAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008038-T1.utr5p1 | KJC3_008038-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008038-T1.utr3p1 | KJC3_008038-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.6 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:759404..760533 + |
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