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KJC3_008045-T1, KJC3_008045-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008045-T1
Unique NameKJC3_008045-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:781334..782391-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008045-T1 ID=KJC3_008045-T1|Name=KJC3_008045-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1058bp|location=Sequence derived from alignment at ch6:781334..782391- (Aspergillus niger KJC3)
GCACCTCCTCGTTTTCGTCTCCCCAACCTCGATGAGAGTTCAAGGTGGCA
GTCGCAAAAGAAAGAGAATGTCCAAACTATCCCATCAACTCAAGGCGCTG
ATCAACGCCCCGGCAGCACGCCCCAACACTGTCCCTGCGCCGCCGAATAT
CCAATCTATATACAGGAAGATCCAACAAGGCGCGCAGTCCCAGAACCTAT
CCCGATCATCATGGCTAGCTCTATCGGTCAGTTGTCGTTCCATTCCTTAA
CTCGCAGCAGCACGAGCAGCTAATGTGTCCTCTGCCCCAGTAGACAGCCA
CCACCATGACGATGAACTCCCCTGAATCCCTGACAGAACTCTACCAACTA
GCCAGCACCTCCCAATCCGCCAAGGAGAGCCTAGCGACAGCGGAATTCAT
GCGCGAAGTAGGCCTCAAGTGCATCAGCTTCAACGGCATCCCACGGACCA
TCAACTGCCTCAATGCCTTCAAAGCCAGTCTCCCCGAATCAATCAGTTCG
CAACTCTCACAAACCCCCACCCGAACACCTACTCCAGAGAATATCCAAGA
AATCTGCGCCAGAGGTCAGAATCTCTGGGACTCAATCTACCGACCCTTCG
AGAAGAAACTCTACAACAAGCTGGCGGATTCACACCCCGACCTGCCGGTC
CATATTTTGAACGCTAACTATGGGGCGCTTCTGTCCGACCCTAAGCGGAC
TACCGGTGCGAATGTGGGCAGGTTAGCAACTTCAATTGTTGCTATCGCAT
GTCTTCGTGCTCAGACGGGGGTGGGCCCGCAGGTGACGTCACATGTGTTT
GGTCTGCGGAAGGCGGTTGAAGATGGAACGTGGGTGGCTGATATGGAAGC
AGAAGAGGGTGCCAAGTGGCTGGCCAGTGAGGAGGGTAATACTTGGATTA
TACAGAGTGTTGACGATATTGTCGAGACAATCAGTGGAGGGACGGGCTCG
AACTTTACACCTGCTAGATCGGCTAAGATATAGATATACTATGGCCCGAT
ACTCATGTATAATAGAAGCCATCTGGCAAGCACAGCTATATGATATATCC
ATACCTAT
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Coding sequence (CDS) from alignment at ch6:781334..782391-

>KJC3_008045-T1 ID=KJC3_008045-T1|Name=KJC3_008045-T1|organism=Aspergillus niger KJC3|type=CDS|length=1770bp|location=Sequence derived from alignment at ch6:781334..782391- (Aspergillus niger KJC3)
ACAGCCACCACCATGACGATGAACTCCCCTGAATCCCTGACAGAACTCTA
CCAACTAGCCAGCACCTCCCAATCCGCCAAGGAGAGCCTAGCGACAGCGG
AATTCATGCGCGAAGTAGGCCTCAAGTGCATCAGCTTCAACGGCATCCCA
CGGACCATCAACTGCCTCAATGCCTTCAAAGCCAGTCTCCCCGAATCAAT
CAGTTCGCAACTCTCACAAACCCCCACCCGAACACCTACTCCAGAGAATA
TCCAAGAAATCTGCGCCAGAGGTCAGAATCTCTGGGACTCAATCTACCGA
CCCTTCGAGAAGAAACTCTACAACAAGCTGGCGGATTCACACCCCGACCT
GCCGGTCCATATTTTGAACGCTAACTATGGGGCGCTTCTGTCCGACCCTA
AGCGGACTACCGGTGCGAATGTGGGCAGGTTAGCAACTTCAATTGTTGCT
ATCGCATGTCTTCGTGCTCAGACGGGGGTGGGCCCGCAGGTGACGTCACA
TGTGTTTGGTCTGCGGAAGGCGGTTGAAGATGGAACGTGGGTGGCTGATA
TGGAAGCAGAAGAGGGTGCCAAGTGGCTGGCCAGTGAGGAGGGTAATACT
TGGATTATACAGAGTGTTGACGATATTGTCGAGACAATCAGTGGAGGGAC
GGGCTCGAACTTTACACCTGCTAGATCGGCTAAGATATAGATGAGAGTTC
AAGGTGGCAGTCGCAAAAGAAAGAGAATGTCCAAACTATCCCATCAACTC
AAGGCGCTGATCAACGCCCCGGCAGCACGCCCCAACACTGTCCCTGCGCC
GCCGAATATCCAATCTATATACAGGAAGATCCAACAAGGCGCGCAGTCCC
AGAACCTATCCCGATCATCATGGCTAGCTCTATCGACAGCCACCACCATG
ACGATGAACTCCCCTGAATCCCTGACAGAACTCTACCAACTAGCCAGCAC
CTCCCAATCCGCCAAGGAGAGCCTAGCGACAGCGGAATTCATGCGCGAAG
TAGGCCTCAAGTGCATCAGCTTCAACGGCATCCCACGGACCATCAACTGC
CTCAATGCCTTCAAAGCCAGTCTCCCCGAATCAATCAGTTCGCAACTCTC
ACAAACCCCCACCCGAACACCTACTCCAGAGAATATCCAAGAAATCTGCG
CCAGAGGTCAGAATCTCTGGGACTCAATCTACCGACCCTTCGAGAAGAAA
CTCTACAACAAGCTGGCGGATTCACACCCCGACCTGCCGGTCCATATTTT
GAACGCTAACTATGGGGCGCTTCTGTCCGACCCTAAGCGGACTACCGGTG
CGAATGTGGGCAGGTTAGCAACTTCAATTGTTGCTATCGCATGTCTTCGT
GCTCAGACGGGGGTGGGCCCGCAGGTGACGTCACATGTGTTTGGTCTGCG
GAAGGCGGTTGAAGATGGAACGTGGGTGGCTGATATGGAAGCAGAAGAGG
GTGCCAAGTGGCTGGCCAGTGAGGAGGGTAATACTTGGATTATACAGAGT
GTTGACGATATTGTCGAGACAATCAGTGGAGGGACGGGCTCGAACTTTAC
ACCTGCTAGATCGGCTAAGATATAGATGAGAGTTCAAGGTGGCAGTCGCA
AAAGAAAGAGAATGTCCAAACTATCCCATCAACTCAAGGCGCTGATCAAC
GCCCCGGCAGCACGCCCCAACACTGTCCCTGCGCCGCCGAATATCCAATC
TATATACAGGAAGATCCAACAAGGCGCGCAGTCCCAGAACCTATCCCGAT
CATCATGGCTAGCTCTATCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008045KJC3_008045Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008045-T1KJC3_008045-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008045-T1.cdsKJC3_008045-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008045-T1.utr3p1KJC3_008045-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008045-T1.exon2KJC3_008045-T1.exon2Aspergillus niger KJC3exon
KJC3_008045-T1.exon1KJC3_008045-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008045-T1.utr5p1KJC3_008045-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029032
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:781334..782391 -
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