You are here

Home

KJC3_008048-T1, KJC3_008048-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008048-T1
Unique NameKJC3_008048-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:788581..790071+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008048-T1 ID=KJC3_008048-T1|Name=KJC3_008048-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1491bp|location=Sequence derived from alignment at ch6:788581..790071+ (Aspergillus niger KJC3)
CCCATCCTCTAAATTGAGTACCTCAATACATAGGAGAGCGGCAAACCTAT
ATAATTCTAGTCCGTCAGTTCCTTTTCGTTGCTCCTCCACGCATTCATTC
AACTCTAAAACACTCATTTACTGTCTACTATTGCTCTCATCACGCTCATT
TTATAGACATTTTGTTCAATCGTTCAATTCGTTCATTGTTATCATTCATC
ATTTCTGTCTACTGTTACCGTTCCTAAATTTCGTGACAAGATGTGGTTCA
GACATATCACCACTCAGAAGGCCGTCGCTTTAGCTTCTTTGCTCCTGACG
CCCGGTGTATTAGCAGCTGCCATACCGCCGAGAGAAGTTGACTCGGATTT
GACGACGCCCTCATTTGTAGCTGGTGTTCCGATAAACACACACGTCCCTA
CAACTGAAGCGGATGGCAGTCCATCCTCCGTCCCCTACTTCGGTTCTCCG
GACTGCCGTGTAAGTACTAATGAAGCTTAATTCTCTCTTTTTCTCTTCTT
TTGGTCGCTACTGAGCTCTGACCGATTTAATTCCAGTTCTGCCGTAAAGA
CGGCACCTTGAAGAGCATCTGGGAGATTTTCACTGGCTCGGACACATCCC
AGTCAGGTACTGCTCCCAGGTCTGTTGACGGGGACTCTTTCCTGACAGAG
CGATCCAACGTGGATGTGAACTATATTGCTTCCAAGATTCATGAGGTGGA
CCCCTTCCCCTCGGTTCCTGAAGATAGCCTTTCAGATGATGTTACTCCAT
CCAAGACCACACGCCAGCCGACGACTCAGGTGAAACGGGCTACTAGAACC
ACCGGGGATGCCAAATATAACAAGCTTAAGGAAGCGCTCGGGAAAACACC
AGAGGTTGGCCAGGGCTATGCCATCAAGATAAGTATGCACTAATGCGCCC
CCATTTCCAATTTGCCATACTATCCTCCTAAGTGCAATGTGCAGTGAAGC
TAACAAGAGATTGAAACTTCTCTTTAGGGAGTGAACGAGCTCGAGTCGCC
GGCAAGAAGGTTCCCGATCATTATTTGATAGCTGTAGGCTACGTGACGGA
GAGAACCGAAGGTGGCGTCACCTATCTCAAGTTTGCCTCCGGATGCTGGG
ACATTCAGCTCGACGGCAAGAAGATCGAGTTCACGGACCGTGGTGCCAGC
AGTTGGTATGATTGGAGCGAGACTAAGATGGAGGTGCTCGGTAAGATCAG
GTCAGGCGTGGACAACACGGAGATCGAAAGACATGGGGAAGCAATTGCAG
CAAAGATGAATAAGAAGGGATATAGTACCCTCTTCAACAATTGTCGGGAT
TTTGTGCTCAAATTGTACGCCGAAATCAAGGCTTGATTGGAGAGTTCAGT
GTTCAGGCCGGACTTTCTGCCGGTCATATCATGTCAAGAGGTGCTCCGTC
ATGTATCCAGATAGCATTCGTTATTGTGAGTGTGATAGCTAGAGGTATTT
AAGTGTCAGGTGGTTTGGGAGTTACTCCCAGAAAGTCAGGG
back to top

Coding sequence (CDS) from alignment at ch6:788581..790071+

>KJC3_008048-T1 ID=KJC3_008048-T1|Name=KJC3_008048-T1|organism=Aspergillus niger KJC3|type=CDS|length=2790bp|location=Sequence derived from alignment at ch6:788581..790071+ (Aspergillus niger KJC3)
ATGTGGTTCAGACATATCACCACTCAGAAGGCCGTCGCTTTAGCTTCTTT
GCTCCTGACGCCCGGTGTATTAGCAGCTGCCATACCGCCGAGAGAAGTTG
ACTCGGATTTGACGACGCCCTCATTTGTAGCTGGTGTTCCGATAAACACA
CACGTCCCTACAACTGAAGCGGATGGCAGTCCATCCTCCGTCCCCTACTT
CGGTTCTCCGGACTGCCGTTTCTGCCGTAAAGACGGCACCTTGAAGAGCA
TCTGGGAGATTTTCACTGGCTCGGACACATCCCAGTCAGGTACTGCTCCC
AGGTCTGTTGACGGGGACTCTTTCCTGACAGAGCGATCCAACGTGGATGT
GAACTATATTGCTTCCAAGATTCATGAGGTGGACCCCTTCCCCTCGGTTC
CTGAAGATAGCCTTTCAGATGATGTTACTCCATCCAAGACCACACGCCAG
CCGACGACTCAGGTGAAACGGGCTACTAGAACCACCGGGGATGCCAAATA
TAACAAGCTTAAGGAAGCGCTCGGGAAAACACCAGAGGTTGGCCAGGGCT
ATGCCATCAAGTTCTCTTTAGGGAGTGAACGAGCTCGAGTCGCCGGCAAG
AAGGTTCCCGATCATTATTTGATAGCTGTAGGCTACGTGACGGAGAGAAC
CGAAGGTGGCGTCACCTATCTCAAGTTTGCCTCCGGATGCTGGGACATTC
AGCTCGACGGCAAGAAGATCGAGTTCACGGACCGTGGTGCCAGCAGTTGG
TATGATTGGAGCGAGACTAAGATGGAGGTGCTCGGTAAGATCAGGTCAGG
CGTGGACAACACGGAGATCGAAAGACATGGGGAAGCAATTGCAGCAAAGA
TGAATAAGAAGGGATATAGTACCCTCTTCAACAATTGTCGGGATTTTGTG
CTCAAATTGTACGCCGAAATCAAGGCTTGAATGTGGTTCAGACATATCAC
CACTCAGAAGGCCGTCGCTTTAGCTTCTTTGCTCCTGACGCCCGGTGTAT
TAGCAGCTGCCATACCGCCGAGAGAAGTTGACTCGGATTTGACGACGCCC
TCATTTGTAGCTGGTGTTCCGATAAACACACACGTCCCTACAACTGAAGC
GGATGGCAGTCCATCCTCCGTCCCCTACTTCGGTTCTCCGGACTGCCGTT
TCTGCCGTAAAGACGGCACCTTGAAGAGCATCTGGGAGATTTTCACTGGC
TCGGACACATCCCAGTCAGGTACTGCTCCCAGGTCTGTTGACGGGGACTC
TTTCCTGACAGAGCGATCCAACGTGGATGTGAACTATATTGCTTCCAAGA
TTCATGAGGTGGACCCCTTCCCCTCGGTTCCTGAAGATAGCCTTTCAGAT
GATGTTACTCCATCCAAGACCACACGCCAGCCGACGACTCAGGTGAAACG
GGCTACTAGAACCACCGGGGATGCCAAATATAACAAGCTTAAGGAAGCGC
TCGGGAAAACACCAGAGGTTGGCCAGGGCTATGCCATCAAGTTCTCTTTA
GGGAGTGAACGAGCTCGAGTCGCCGGCAAGAAGGTTCCCGATCATTATTT
GATAGCTGTAGGCTACGTGACGGAGAGAACCGAAGGTGGCGTCACCTATC
TCAAGTTTGCCTCCGGATGCTGGGACATTCAGCTCGACGGCAAGAAGATC
GAGTTCACGGACCGTGGTGCCAGCAGTTGGTATGATTGGAGCGAGACTAA
GATGGAGGTGCTCGGTAAGATCAGGTCAGGCGTGGACAACACGGAGATCG
AAAGACATGGGGAAGCAATTGCAGCAAAGATGAATAAGAAGGGATATAGT
ACCCTCTTCAACAATTGTCGGGATTTTGTGCTCAAATTGTACGCCGAAAT
CAAGGCTTGAATGTGGTTCAGACATATCACCACTCAGAAGGCCGTCGCTT
TAGCTTCTTTGCTCCTGACGCCCGGTGTATTAGCAGCTGCCATACCGCCG
AGAGAAGTTGACTCGGATTTGACGACGCCCTCATTTGTAGCTGGTGTTCC
GATAAACACACACGTCCCTACAACTGAAGCGGATGGCAGTCCATCCTCCG
TCCCCTACTTCGGTTCTCCGGACTGCCGTTTCTGCCGTAAAGACGGCACC
TTGAAGAGCATCTGGGAGATTTTCACTGGCTCGGACACATCCCAGTCAGG
TACTGCTCCCAGGTCTGTTGACGGGGACTCTTTCCTGACAGAGCGATCCA
ACGTGGATGTGAACTATATTGCTTCCAAGATTCATGAGGTGGACCCCTTC
CCCTCGGTTCCTGAAGATAGCCTTTCAGATGATGTTACTCCATCCAAGAC
CACACGCCAGCCGACGACTCAGGTGAAACGGGCTACTAGAACCACCGGGG
ATGCCAAATATAACAAGCTTAAGGAAGCGCTCGGGAAAACACCAGAGGTT
GGCCAGGGCTATGCCATCAAGTTCTCTTTAGGGAGTGAACGAGCTCGAGT
CGCCGGCAAGAAGGTTCCCGATCATTATTTGATAGCTGTAGGCTACGTGA
CGGAGAGAACCGAAGGTGGCGTCACCTATCTCAAGTTTGCCTCCGGATGC
TGGGACATTCAGCTCGACGGCAAGAAGATCGAGTTCACGGACCGTGGTGC
CAGCAGTTGGTATGATTGGAGCGAGACTAAGATGGAGGTGCTCGGTAAGA
TCAGGTCAGGCGTGGACAACACGGAGATCGAAAGACATGGGGAAGCAATT
GCAGCAAAGATGAATAAGAAGGGATATAGTACCCTCTTCAACAATTGTCG
GGATTTTGTGCTCAAATTGTACGCCGAAATCAAGGCTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008048KJC3_008048Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008048-T1KJC3_008048-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008048-T1.utr5p1KJC3_008048-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008048-T1.exon1KJC3_008048-T1.exon1Aspergillus niger KJC3exon
KJC3_008048-T1.exon2KJC3_008048-T1.exon2Aspergillus niger KJC3exon
KJC3_008048-T1.exon3KJC3_008048-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008048-T1.cdsKJC3_008048-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008048-T1.utr3p1KJC3_008048-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-25)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:788581..790071 +
Powered by Drupal