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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:790495..791446- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008049-T1 ID=KJC3_008049-T1|Name=KJC3_008049-T1|organism=Aspergillus niger KJC3|type=mRNA|length=952bp|location=Sequence derived from alignment at ch6:790495..791446- (Aspergillus niger KJC3)
CCTCATTGCTACTAAAACTATGCAATCATTCATTTAGCATTCACTCGTTT
GTCCACCGTTGCCCTCGTTACTCTCACTCATTCTTACTACTGCACAATTT
CACCCCTTACTCTTCTTCATCATCAGTCGTTACTTTGTCACCATCAGCAT
ACACGTTGCCACAATGTGGTTCAGATATATCACTGTTCAGAAGGCCTTTG
TTCTATCTTCTTTGCTACTGGCGTCTGGGATCTCAGCAGCTGCTATCCCC
GCAAGGTTAGCTGACCCGGCATCGGTCTCTGTGACGACAACAAACACGCA
AGCTCCTACAGGTCAAAGGGATGGCAGGCCAACCTCACTCCCTTATGAAG
GTGCCCCAAACTGTCAGGTGAGTGCTAATGACCCCCTGCTAAACCATGGC
TTTGCTGGGCCTAACCCGATTATTCTCAGTTCTGCCATGAAGACGAAGGC
GAACAGACTACCGGCGAGTCCACGACGCAGGTGAAACGAGACAGCCACAT
TATCGCAGCAAGTATGTTCTAAACAATTCATTGCCCCCAGCCTCCCTTAG
TATTATTATGGTTCAATTTGCTGCGAAGCTAACAAGAAATGGCAAATTGC
TGCAGGAACGGATGCCGATGAAAAAAAATCCGATGAGGAAGAGACCAAGG
AGATAGAAAAGAAGGTTAATGAAAAGTGTCATGGGAATGCGCTTTGTGAG
ATTATTTCCACCTTGTCGAAGTCTTACTAGTAGCTCCGTGGGTAGAGCTG
TGTATAATAGGCGCAAGGCCAAGTTAGAGGTGTTTAGATAGGATTATGTT
GATCTGGACATAGTACCACAGGGAGAACATCTGTACTTATTACGCTCTAT
CAGTCACGTTCATTTGATCCAGTGAATACCCGAAGTTGAGAACTGTTTCT
TTTCCAGTTTCTTGATCATTGGCGTAGACATCACAGTGTAGTGGAAATAA
CT back to topCoding sequence (CDS) from alignment at ch6:790495..791446- >KJC3_008049-T1 ID=KJC3_008049-T1|Name=KJC3_008049-T1|organism=Aspergillus niger KJC3|type=CDS|length=1233bp|location=Sequence derived from alignment at ch6:790495..791446- (Aspergillus niger KJC3)
GAACGGATGCCGATGAAAAAAAATCCGATGAGGAAGAGACCAAGGAGATA
GAAAAGAAGGTTAATGAAAAGTGTCATGGGAATGCGCTTTGTGAGATTAT
TTCCACCTTGTCGAAGTCTTACTAGTTCTGCCATGAAGACGAAGGCGAAC
AGACTACCGGCGAGTCCACGACGCAGGTGAAACGAGACAGCCACATTATC
GCAGCAAATGTGGTTCAGATATATCACTGTTCAGAAGGCCTTTGTTCTAT
CTTCTTTGCTACTGGCGTCTGGGATCTCAGCAGCTGCTATCCCCGCAAGG
TTAGCTGACCCGGCATCGGTCTCTGTGACGACAACAAACACGCAAGCTCC
TACAGGTCAAAGGGATGGCAGGCCAACCTCACTCCCTTATGAAGGTGCCC
CAAACTGTCAGGAACGGATGCCGATGAAAAAAAATCCGATGAGGAAGAGA
CCAAGGAGATAGAAAAGAAGGTTAATGAAAAGTGTCATGGGAATGCGCTT
TGTGAGATTATTTCCACCTTGTCGAAGTCTTACTAGTTCTGCCATGAAGA
CGAAGGCGAACAGACTACCGGCGAGTCCACGACGCAGGTGAAACGAGACA
GCCACATTATCGCAGCAAATGTGGTTCAGATATATCACTGTTCAGAAGGC
CTTTGTTCTATCTTCTTTGCTACTGGCGTCTGGGATCTCAGCAGCTGCTA
TCCCCGCAAGGTTAGCTGACCCGGCATCGGTCTCTGTGACGACAACAAAC
ACGCAAGCTCCTACAGGTCAAAGGGATGGCAGGCCAACCTCACTCCCTTA
TGAAGGTGCCCCAAACTGTCAGGAACGGATGCCGATGAAAAAAAATCCGA
TGAGGAAGAGACCAAGGAGATAGAAAAGAAGGTTAATGAAAAGTGTCATG
GGAATGCGCTTTGTGAGATTATTTCCACCTTGTCGAAGTCTTACTAGTTC
TGCCATGAAGACGAAGGCGAACAGACTACCGGCGAGTCCACGACGCAGGT
GAAACGAGACAGCCACATTATCGCAGCAAATGTGGTTCAGATATATCACT
GTTCAGAAGGCCTTTGTTCTATCTTCTTTGCTACTGGCGTCTGGGATCTC
AGCAGCTGCTATCCCCGCAAGGTTAGCTGACCCGGCATCGGTCTCTGTGA
CGACAACAAACACGCAAGCTCCTACAGGTCAAAGGGATGGCAGGCCAACC
TCACTCCCTTATGAAGGTGCCCCAAACTGTCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008049-T1.utr3p1 | KJC3_008049-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008049-T1.utr5p1 | KJC3_008049-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-25) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:790495..791446 - |
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