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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:795191..796225- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008051-T1 ID=KJC3_008051-T1|Name=KJC3_008051-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1035bp|location=Sequence derived from alignment at ch6:795191..796225- (Aspergillus niger KJC3)
ATGGCATCCTCCAACACCCAACCCGAAGAACCCATCACCATCCCCCAGGA
CCGGGATGGCGTTGCCTACCTCTACGGCCACCCTCTCCTCAACTCGCTCT
CTCCTCCTCTCCATGCCGCCATCTACAACCACCTCGGGCTGAACTGGATT
CAGATCCCCCTCTCCAGCGTCTGCGGCACCTCCGCCACCTACCCTCCCCC
GTACACACGCTCCCCGCCCATCGACACCTTCCTGTCCTCCATCCGCGCCA
ACCCCAAGTTCGTCGGCTCCTCCGTCACTATGCCCTGGAAGGTCTCCATC
ATGCCGCACCTGGACGACCTTACCGAGGACGCCCGCCAGGCCGGCGCCTG
CAACACTATCTTCCTGCGCGACAATGCCGACGGCTCCCGCTCCTACGTCG
GCACTAACACCGACTGCATCGGTATCCGCGAAGCCCTCGTCCAGAACACC
GTTAACGCTGCCGAACGGTTCGCTGGCAAGCCTGCCCTCGTTGTCGGTGG
TGGTGGTACCGCTCGCTCCGCCATCTACGTTATGCGCAAGTGGCTCGGTG
CCAGCAAGATTTACATTGTGAACCGTGATGCTAGTGAGGTTCAGGCCATT
ATGGAGGAGGATCAGCAGCGCAACCCGTCCGCGGATAAGGCGCCCTTGGT
TCCCGTTACGGATCCGGAGGTCGCGAAGACGCTGGAGACTCCCGCTGCTA
TTGTCTCGGGTATCCCCAACTACCCGCCCAAGACCGAGGAGGAGATCCGT
GCCAGGAATGTCCTGACGGCGTTGTTGGGCGCCAAGGACGATGGCAAGCC
TAAGGGCGTTATTTTGGAGATGTGCTACCACCCTGTTATCTGGACGGAGA
TTGCCGAGTTGGCCGATGCCGCGGGATGGAAGGTTATTGTGGGCTCGGAG
GCGCTGCTCTGGCAGGGTCTGGAGCAGGCCAAGCTTTGGACTGGAAAAGA
CGTGGTTGCTGTTCCGGGCTTGTTGGATATGGTCAAGGAGGTGGTGGCCA
AGAATTTGGCAGAGAGGCAGAAGGCTACTCTGTAA back to topCoding sequence (CDS) from alignment at ch6:795191..796225- >KJC3_008051-T1 ID=KJC3_008051-T1|Name=KJC3_008051-T1|organism=Aspergillus niger KJC3|type=CDS|length=1035bp|location=Sequence derived from alignment at ch6:795191..796225- (Aspergillus niger KJC3)
ATGGCATCCTCCAACACCCAACCCGAAGAACCCATCACCATCCCCCAGGA
CCGGGATGGCGTTGCCTACCTCTACGGCCACCCTCTCCTCAACTCGCTCT
CTCCTCCTCTCCATGCCGCCATCTACAACCACCTCGGGCTGAACTGGATT
CAGATCCCCCTCTCCAGCGTCTGCGGCACCTCCGCCACCTACCCTCCCCC
GTACACACGCTCCCCGCCCATCGACACCTTCCTGTCCTCCATCCGCGCCA
ACCCCAAGTTCGTCGGCTCCTCCGTCACTATGCCCTGGAAGGTCTCCATC
ATGCCGCACCTGGACGACCTTACCGAGGACGCCCGCCAGGCCGGCGCCTG
CAACACTATCTTCCTGCGCGACAATGCCGACGGCTCCCGCTCCTACGTCG
GCACTAACACCGACTGCATCGGTATCCGCGAAGCCCTCGTCCAGAACACC
GTTAACGCTGCCGAACGGTTCGCTGGCAAGCCTGCCCTCGTTGTCGGTGG
TGGTGGTACCGCTCGCTCCGCCATCTACGTTATGCGCAAGTGGCTCGGTG
CCAGCAAGATTTACATTGTGAACCGTGATGCTAGTGAGGTTCAGGCCATT
ATGGAGGAGGATCAGCAGCGCAACCCGTCCGCGGATAAGGCGCCCTTGGT
TCCCGTTACGGATCCGGAGGTCGCGAAGACGCTGGAGACTCCCGCTGCTA
TTGTCTCGGGTATCCCCAACTACCCGCCCAAGACCGAGGAGGAGATCCGT
GCCAGGAATGTCCTGACGGCGTTGTTGGGCGCCAAGGACGATGGCAAGCC
TAAGGGCGTTATTTTGGAGATGTGCTACCACCCTGTTATCTGGACGGAGA
TTGCCGAGTTGGCCGATGCCGCGGGATGGAAGGTTATTGTGGGCTCGGAG
GCGCTGCTCTGGCAGGGTCTGGAGCAGGCCAAGCTTTGGACTGGAAAAGA
CGTGGTTGCTGTTCCGGGCTTGTTGGATATGGTCAAGGAGGTGGTGGCCA
AGAATTTGGCAGAGAGGCAGAAGGCTACTCTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR013708 |
| DBxref | PFAM:PF08501 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:795191..796225 - |
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