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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:810583..813442- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008057-T2 ID=KJC3_008057-T2|Name=KJC3_008057-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2860bp|location=Sequence derived from alignment at ch6:810583..813442- (Aspergillus niger KJC3)
ATCATGTTTGTGTTTAAAGGTTGTAATCTTGGCTTAATACTGAATATCGC
ATATTCTGCCACTGATTCGTCAATGATGATCTTAGCCAGTATGTTCTCAT
GTTTGGAGAAAATATCCTGTAAATCCTCTGATACAAGATTGTATAAGGCT
AGCTTGGTGCCACCTGTCTGCCCAAGTAGTACTGTGTAGTAGCTAACTAA
CAAATAACTAACTACTACTAAGTTGTGAGCCTCCATTGAAGCCGTTGATT
TACCTGCTTATTATCTCCCGCCGCTTTTATCCCCATTTCTGGTGCCGCTT
CAAACCATGGCACCTTTTAGTAAGACCATACATACATAGTTACATACATA
TATCGTCTTGCACGATTCTTCTAACAAGAAGTGAAACAAACAAATCACTA
TTTGCGAAATTGAATGCCTCGTGCCACCGGTTTGTACTTATGCAATTTAG
ACAGTGACTCGGTGGATGCTGCCAATACTACACAAAGTCCAGCCGATGCC
GATGCCAAGAATCTGACGTCTGAACGTTCATTGAAGCCGCGACTTTCTCC
CATCTTGAACCGCTACAAAACAAAACTCTCTGTCCTACAACGCGCATCTT
ATTCTGAGCATGAATCAACAGCGTCATCTTTTCTAAATCTTCTCGGAAGA
TACCCTTTTCCAAAACCCACCATCCAGTTGACAATCTCCACCACTCTTTC
CTTATCCAGCCATGAACAACGACCAATTCCGCCGCCTCGTCCTCGACAAC
CCTTCCTCCAAACCCGCCAAATCCACCAGCCCAGATGCATCTTCTCCATC
CCAACAGCAACCACGCAAAAGCATTGGCAATGCGACACCCGCAGCCGGCG
CACTGGGCTCGCGCCTTCGCTCCAGCATCCCCATGACACCGTGAGCTGAT
TCTCTTCCTTTCCCTCAACCCCACCTGCGCTTTTAATCCTTCGTTTACAC
GATTGATATCACTAACCACGTCTCTTTTCGTCGCAGCCGCTCCATAACAA
ATGTCGACTTTGCGCGCCAACTAGCCGAATACCGTCGCGAAGCCCAACCC
GCTTCCAAGAAATTCAAAGCTTCCGCCGCCCCCAAGGGAACGAGATTACC
GTCCGGTTATCAAGATCGGGCTGCGCTGTTGCGTCAGAAGGAAGCAGCAG
AGGAAGGCGATAGTGCTGATGATGGATCGAATCTGGAGAAGCGCGTCAAG
GCGTTGGAGGAGATGGTCAAACTAGGACAGATTGACCAGGCGACGTTTGA
GAAGCTACGTGCCGAGATGGGGGTGGGTGGGGACCTGAAAAGTACGCATA
TGGTGAAAGGCTTGGATTGGGAGTTGCTGAGGAGGGTTAAGGGGGGTGAG
GATGTCGAGGTCTTGGAGAAGGAAGGGGAGAAGGGTGAGGGAAAGGAGGA
AGAAGATGTAGCAGATGTGGATGAGGAGCTGGATCGGGTGTTGGGAGAAA
AGGGTGAGGGGGTGGATGCATTGTCTGCTGCCCCGAAGGAAAATAAGGAG
AAAAAGAAGAAGGGGGTGATGGTGCAGAGAAAGTCGAGAGATGAGATCCT
CAGGGAGTTGAAGGCTAGTCGTGCTGCGGCTGCGGCTGAGGCGGCGAAGC
CGGCTGAGCCCGCCTTAGGAACCAAGTTTAGGAGGATCGGGGGAGAGTCC
AAGGCGGAGAAGAAGCGATGGGTGGAGCAGGATGAGAATGGGCGGCGGAA
GGAGATTCTACAGATCACAGACGCGGAGGGCAAGACAAAGAGGAAGGTGA
GATGGCTAGACAAGCCTGGTGAGGTTGGTGGTGGCGATGGGCCTGCTGGA
TTATTGATGCCGGACAAGGATGCGAAGCCGCTGGGCATGGAAATTCCAGC
AGAGGTTGCATCTAAGGCTTCCGCGCCGGCGGAGCACGACGACGACGACG
ATGATATTTTTGCTGGCGTCGGAGATGACTATAACCCGCTTGGTGATCTA
CCGGATGATGACGATTCATCAGATGAGAGTGAGGATGGCGAGAAGCCACC
AAAGGCCACGGAACCAGCTCCTGCTGCCGGTGATCCGAAGAAACCGGAGG
CGACAACAAGCCGGCCTCGAAATTACTTTTCTACGTCTACAACGGATGAG
GTTCCTGAGATAGACCGGTCGAACCCGTTGGCGAAGGATCCTACGCTACT
AGCGGCCCTGAAACGGGCTGCTGCGTTACGACAATCCGAGGAGGCTGGTG
CTACCGATGCTGATGCTGGACATGTCGACGACGAGACGGTGCTGCGACGA
AAGAAGTTTCTGGAGGAGGCGCGTCGGCGGGAAGCTTTGGATGCGATGGA
TATGGATATGGGCTTTGGGGGAAGCCGCAACGATGACGACGAGGAGGACG
AGGAGGTGGTGCTGGAGACTGAGGGACGCGGCGGGAAGAAGAGGAAACGA
GGGCCGAAGAAGAAGAAGGGCGACAAGGACAGTGTGACGGATGTGATGCG
CGTGCTAGAAGGGAGGAAAAAGGAGTGATCCTTGAATGCTAGTGTCTTGT
AACACGAGTCAGCTCCTCTGTGGCATAGGTGGTGCCTGGGGAGAAGGAAC
CCAGTCAAGATCGCCAGGTAAACACGGGCTATAGCCTGTAGTCACACCTG
GGCCCGTTTTTGGGACTGCTGTTGCCATATTGTGCTCGCTGCATCATACA
GGAAACCAGATGAGCAATCCCTGATATCCTATCCCTTCCTGGAACAGCAA
GTGATATGCTATCGTGAATCCACGTTCGAGAGGTTGTGCTTCTACGGGAG
CTTATACAGCAGTATTGGCAGCATATCCAACGCATCATCTTCAATTGACC
TACATGTTCAGTAGTAGGCATTACTAGTATATATAGTCATCATGAAAGAC
CCAAAGTGGT back to topCoding sequence (CDS) from alignment at ch6:810583..813442- >KJC3_008057-T2 ID=KJC3_008057-T2|Name=KJC3_008057-T2|organism=Aspergillus niger KJC3|type=CDS|length=3342bp|location=Sequence derived from alignment at ch6:810583..813442- (Aspergillus niger KJC3)
CCGCTCCATAACAAATGTCGACTTTGCGCGCCAACTAGCCGAATACCGTC
GCGAAGCCCAACCCGCTTCCAAGAAATTCAAAGCTTCCGCCGCCCCCAAG
GGAACGAGATTACCGTCCGGTTATCAAGATCGGGCTGCGCTGTTGCGTCA
GAAGGAAGCAGCAGAGGAAGGCGATAGTGCTGATGATGGATCGAATCTGG
AGAAGCGCGTCAAGGCGTTGGAGGAGATGGTCAAACTAGGACAGATTGAC
CAGGCGACGTTTGAGAAGCTACGTGCCGAGATGGGGGTGGGTGGGGACCT
GAAAAGTACGCATATGGTGAAAGGCTTGGATTGGGAGTTGCTGAGGAGGG
TTAAGGGGGGTGAGGATGTCGAGGTCTTGGAGAAGGAAGGGGAGAAGGGT
GAGGGAAAGGAGGAAGAAGATGTAGCAGATGTGGATGAGGAGCTGGATCG
GGTGTTGGGAGAAAAGGGTGAGGGGGTGGATGCATTGTCTGCTGCCCCGA
AGGAAAATAAGGAGAAAAAGAAGAAGGGGGTGATGGTGCAGAGAAAGTCG
AGAGATGAGATCCTCAGGGAGTTGAAGGCTAGTCGTGCTGCGGCTGCGGC
TGAGGCGGCGAAGCCGGCTGAGCCCGCCTTAGGAACCAAGTTTAGGAGGA
TCGGGGGAGAGTCCAAGGCGGAGAAGAAGCGATGGGTGGAGCAGGATGAG
AATGGGCGGCGGAAGGAGATTCTACAGATCACAGACGCGGAGGGCAAGAC
AAAGAGGAAGGTGAGATGGCTAGACAAGCCTGGTGAGGTTGGTGGTGGCG
ATGGGCCTGCTGGATTATTGATGCCGGACAAGGATGCGAAGCCGCTGGGC
ATGGAAATTCCAGCAGAGGTTGCATCTAAGGCTTCCGCGCCGGCGGAGCA
CGACGACGACGACGATGATATTTTTGCTGGCGTCGGAGATGACTATAACC
CGCTTGGTGATCTACCGGATGATGACGATTCATCAGATGAGAGTGAGGAT
GGCGAGAAGCCACCAAAGGCCACGGAACCAGCTCCTGCTGCCGGTGATCC
GAAGAAACCGGAGGCGACAACAAGCCGGCCTCGAAATTACTTTTCTACGT
CTACAACGGATGAGGTTCCTGAGATAGACCGGTCGAACCCGTTGGCGAAG
GATCCTACGCTACTAGCGGCCCTGAAACGGGCTGCTGCGTTACGACAATC
CGAGGAGGCTGGTGCTACCGATGCTGATGCTGGACATGTCGACGACGAGA
CGGTGCTGCGACGAAAGAAGTTTCTGGAGGAGGCGCGTCGGCGGGAAGCT
TTGGATGCGATGGATATGGATATGGGCTTTGGGGGAAGCCGCAACGATGA
CGACGAGGAGGACGAGGAGGTGGTGCTGGAGACTGAGGGACGCGGCGGGA
AGAAGAGGAAACGAGGGCCGAAGAAGAAGAAGGGCGACAAGGACAGTGTG
ACGGATGTGATGCGCGTGCTAGAAGGGAGGAAAAAGGAGTGAATGAACAA
CGACCAATTCCGCCGCCTCGTCCTCGACAACCCTTCCTCCAAACCCGCCA
AATCCACCAGCCCAGATGCATCTTCTCCATCCCAACAGCAACCACGCAAA
AGCATTGGCAATGCGACACCCGCAGCCGGCGCACTGGGCTCGCGCCTTCG
CTCCAGCATCCCCATGACACCCCGCTCCATAACAAATGTCGACTTTGCGC
GCCAACTAGCCGAATACCGTCGCGAAGCCCAACCCGCTTCCAAGAAATTC
AAAGCTTCCGCCGCCCCCAAGGGAACGAGATTACCGTCCGGTTATCAAGA
TCGGGCTGCGCTGTTGCGTCAGAAGGAAGCAGCAGAGGAAGGCGATAGTG
CTGATGATGGATCGAATCTGGAGAAGCGCGTCAAGGCGTTGGAGGAGATG
GTCAAACTAGGACAGATTGACCAGGCGACGTTTGAGAAGCTACGTGCCGA
GATGGGGGTGGGTGGGGACCTGAAAAGTACGCATATGGTGAAAGGCTTGG
ATTGGGAGTTGCTGAGGAGGGTTAAGGGGGGTGAGGATGTCGAGGTCTTG
GAGAAGGAAGGGGAGAAGGGTGAGGGAAAGGAGGAAGAAGATGTAGCAGA
TGTGGATGAGGAGCTGGATCGGGTGTTGGGAGAAAAGGGTGAGGGGGTGG
ATGCATTGTCTGCTGCCCCGAAGGAAAATAAGGAGAAAAAGAAGAAGGGG
GTGATGGTGCAGAGAAAGTCGAGAGATGAGATCCTCAGGGAGTTGAAGGC
TAGTCGTGCTGCGGCTGCGGCTGAGGCGGCGAAGCCGGCTGAGCCCGCCT
TAGGAACCAAGTTTAGGAGGATCGGGGGAGAGTCCAAGGCGGAGAAGAAG
CGATGGGTGGAGCAGGATGAGAATGGGCGGCGGAAGGAGATTCTACAGAT
CACAGACGCGGAGGGCAAGACAAAGAGGAAGGTGAGATGGCTAGACAAGC
CTGGTGAGGTTGGTGGTGGCGATGGGCCTGCTGGATTATTGATGCCGGAC
AAGGATGCGAAGCCGCTGGGCATGGAAATTCCAGCAGAGGTTGCATCTAA
GGCTTCCGCGCCGGCGGAGCACGACGACGACGACGATGATATTTTTGCTG
GCGTCGGAGATGACTATAACCCGCTTGGTGATCTACCGGATGATGACGAT
TCATCAGATGAGAGTGAGGATGGCGAGAAGCCACCAAAGGCCACGGAACC
AGCTCCTGCTGCCGGTGATCCGAAGAAACCGGAGGCGACAACAAGCCGGC
CTCGAAATTACTTTTCTACGTCTACAACGGATGAGGTTCCTGAGATAGAC
CGGTCGAACCCGTTGGCGAAGGATCCTACGCTACTAGCGGCCCTGAAACG
GGCTGCTGCGTTACGACAATCCGAGGAGGCTGGTGCTACCGATGCTGATG
CTGGACATGTCGACGACGAGACGGTGCTGCGACGAAAGAAGTTTCTGGAG
GAGGCGCGTCGGCGGGAAGCTTTGGATGCGATGGATATGGATATGGGCTT
TGGGGGAAGCCGCAACGATGACGACGAGGAGGACGAGGAGGTGGTGCTGG
AGACTGAGGGACGCGGCGGGAAGAAGAGGAAACGAGGGCCGAAGAAGAAG
AAGGGCGACAAGGACAGTGTGACGGATGTGATGCGCGTGCTAGAAGGGAG
GAAAAAGGAGTGAATGAACAACGACCAATTCCGCCGCCTCGTCCTCGACA
ACCCTTCCTCCAAACCCGCCAAATCCACCAGCCCAGATGCATCTTCTCCA
TCCCAACAGCAACCACGCAAAAGCATTGGCAATGCGACACCCGCAGCCGG
CGCACTGGGCTCGCGCCTTCGCTCCAGCATCCCCATGACACC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008057-T2.utr3p1 | KJC3_008057-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012916 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch6 | supercontig | ch6:810583..813442 - |
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