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KJC3_008062-T1, KJC3_008062-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008062-T1
Unique NameKJC3_008062-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:832326..834466-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008062-T1 ID=KJC3_008062-T1|Name=KJC3_008062-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2141bp|location=Sequence derived from alignment at ch6:832326..834466- (Aspergillus niger KJC3)
ATTCCATTGCACCTCTCCAGTCTCGAGGTTTCCCATGCCAGGACATTAGC
ACATTAAGTGCTCATGACATTGAGCCGAGATGTTGGTCTTTCGCATCCAT
TGAATCGGATGCTTCGACCATCAACTACCGAGCCATCAGTGACTGATCGT
GGCTCGCCCCCAATTACGTATATCAAGAGTTCAATGGCATTACCGTAGAA
GTGACCTGGCATATCATACTTCAAAAGGGATAGCGGGGAGATCCGATCCA
CGGTTGTCTTACCTAAGGAATGTTACCCCCGCCTTGACCTCGGCTTTCCC
TTCACGATGGAACAATCTACTCTAACTTCAGCAGTATCTTCCCACCACCT
ACATCTTGATACCCCTTTGCTTCACTCGGGCTGTCACCAGATTGGTTATC
GCCATAGATGAGCGAATTTGGGGGGACTTTGCGCTCGTCTTAGTTATAAA
GTCTCCCAGTGGTTGCTAGGAACCATATCAGTCTCAAGTTCTGTTCGCTC
AAAAACTCAATTTTTTTTCCTTGTATCGCTTATCAGAGATGTCCGATACC
AAGGCTCGGCTTGCCGCTCAGAGATCCTCTCCACTCCCCGCTAGTTACAT
ACCTGTAGCTCAATCCCCGGAGCAGGTTGCTCCCACATTAGAGGCTCCTC
AGAGCGGAGACACCCTACCAGAAGTGCCTGCCACGCATGTCGAAAAACAA
GACAACGTCCTTGCATACCTCGCGACAAAAGAGTTCTACATTACCCTTTT
CCTCGGGTGAGTTATACAGTTGGAAACGCTTGAAGCACCAAGGTGTGGTC
GATGGTTAACTTGTCACACAGACAGGTTCTGGCTATCACCAACACTGCCT
GTAGCACATTCAGCACACTACTGGTCAGCGAGGGAACCTCAATCCCGGCT
TTTCAGACATTCTTCAACTACTTTCTGCTCAATGCTATCTTCACCCCATA
TACCATATACTGTTATGGCCTGAAAGGCTGGACACGGGTAGTGCTTCAGC
ACGGTTGGAAATGTAAGCGTCGCTGTATACTATAAGAAGCCCCCTCACCT
CCCCACCAAGGCCTCTCTAATTGCGGTCTTGGATAGATATAATTTTGGCC
TTCTGCGACGTGGAAGGTAACTATTTCATTGTGCTGGCCTATCGCCATAC
GACTATGCTGAGCGCCCAGTTGATAAATTTCTGGGCCATTGCGGTCGTGC
TCATTGTGTCCTTCACAATCTTGCGCGTGCGTTACCATATCACACAGGTG
TTAGGTATTATGATCTGTATTGGCGGCATGGGCTTCCTGATTGCTTCGGA
CCGGATCACTGGTGCCGATGACGGGAACTATTCGCGCGCCGATTTGATCA
AAGGCGACCTCTTCGCACTCTTGGGCGCGACATTCTACGGACTTGCCAAC
ACGGGTGAGGAGGTCTTTGTCAGTACGGCCCCGGTATACGAAGTTTTGGG
CCAAATGGCCATGTACGGCATGGTCATAAATGGCGTCCAGGCGGGCGTTT
TCGACCGCAACTCGTTCCATAATGCGATCTGGAACTTCCAGGTTGGTATC
TACTTGACAGGATATACGCTGTGTCTTGCTTCCTTCTATTGTATGGTACC
GCTGCTGTTCCGGCTGTCATCGGCGGCATTTTTCAACATATCGATGCTGA
CGATGAACTTCTGGGGTGTTCTCATCGGGGTCGGGGTGTTTCACTACACA
ATCCACTGGATGTACCCGATTGCTTTCGCGCTCATTATCCTCGGGCAGCT
CATCTACTATCTGGGGCGGCGCGTGCTGGGAGAAGCGCGCAAACCCTGGC
TGGGACGGAACCAAGAATGCGGCGTGTCGGGACTGTTTACAGCACGAAGA
AAGATCGAGACCGCTGCCGGCCGGAGTCGCAGCGACTCCATATCCACGGC
TTGTTCAGAGCGTGATCCTATGCTACCACATGCCAGTGTGGCTGAGGAAG
CAGCTTAGGGACCCTGACGTCCTGCTGAGTACATTCATTCATAAGATAAA
GAGAAATTGGTTAAACGACGGCATGCTTATGATCGACCCACAATAGCGCT
TGCATAGTTCAGCGAAATTATGTTTTTAGACTATGACATTATATATAACA
AGGCGACGAGGATTGGTACTTACTAGTAATCAATACACAGC
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Coding sequence (CDS) from alignment at ch6:832326..834466-

>KJC3_008062-T1 ID=KJC3_008062-T1|Name=KJC3_008062-T1|organism=Aspergillus niger KJC3|type=CDS|length=3843bp|location=Sequence derived from alignment at ch6:832326..834466- (Aspergillus niger KJC3)
ATATAATTTTGGCCTTCTGCGACGTGGAAGGTAACTATTTCATTGTGCTG
GCCTATCGCCATACGACTATGCTGAGCGCCCAGTTGATAAATTTCTGGGC
CATTGCGGTCGTGCTCATTGTGTCCTTCACAATCTTGCGCGTGCGTTACC
ATATCACACAGGTGTTAGGTATTATGATCTGTATTGGCGGCATGGGCTTC
CTGATTGCTTCGGACCGGATCACTGGTGCCGATGACGGGAACTATTCGCG
CGCCGATTTGATCAAAGGCGACCTCTTCGCACTCTTGGGCGCGACATTCT
ACGGACTTGCCAACACGGGTGAGGAGGTCTTTGTCAGTACGGCCCCGGTA
TACGAAGTTTTGGGCCAAATGGCCATGTACGGCATGGTCATAAATGGCGT
CCAGGCGGGCGTTTTCGACCGCAACTCGTTCCATAATGCGATCTGGAACT
TCCAGGTTGGTATCTACTTGACAGGATATACGCTGTGTCTTGCTTCCTTC
TATTGTATGGTACCGCTGCTGTTCCGGCTGTCATCGGCGGCATTTTTCAA
CATATCGATGCTGACGATGAACTTCTGGGGTGTTCTCATCGGGGTCGGGG
TGTTTCACTACACAATCCACTGGATGTACCCGATTGCTTTCGCGCTCATT
ATCCTCGGGCAGCTCATCTACTATCTGGGGCGGCGCGTGCTGGGAGAAGC
GCGCAAACCCTGGCTGGGACGGAACCAAGAATGCGGCGTGTCGGGACTGT
TTACAGCACGAAGAAAGATCGAGACCGCTGCCGGCCGGAGTCGCAGCGAC
TCCATATCCACGGCTTGTTCAGAGCGTGATCCTATGCTACCACATGCCAG
TGTGGCTGAGGAAGCAGCTTAGACAGGTTCTGGCTATCACCAACACTGCC
TGTAGCACATTCAGCACACTACTGGTCAGCGAGGGAACCTCAATCCCGGC
TTTTCAGACATTCTTCAACTACTTTCTGCTCAATGCTATCTTCACCCCAT
ATACCATATACTGTTATGGCCTGAAAGGCTGGACACGGGTAGTGCTTCAG
CACGGTTGGAAATATGTCCGATACCAAGGCTCGGCTTGCCGCTCAGAGAT
CCTCTCCACTCCCCGCTAGTTACATACCTGTAGCTCAATCCCCGGAGCAG
GTTGCTCCCACATTAGAGGCTCCTCAGAGCGGAGACACCCTACCAGAAGT
GCCTGCCACGCATGTCGAAAAACAAGACAACGTCCTTGCATACCTCGCGA
CAAAAGAGTTCTACATTACCCTTTTCCTCGGATATAATTTTGGCCTTCTG
CGACGTGGAAGGTAACTATTTCATTGTGCTGGCCTATCGCCATACGACTA
TGCTGAGCGCCCAGTTGATAAATTTCTGGGCCATTGCGGTCGTGCTCATT
GTGTCCTTCACAATCTTGCGCGTGCGTTACCATATCACACAGGTGTTAGG
TATTATGATCTGTATTGGCGGCATGGGCTTCCTGATTGCTTCGGACCGGA
TCACTGGTGCCGATGACGGGAACTATTCGCGCGCCGATTTGATCAAAGGC
GACCTCTTCGCACTCTTGGGCGCGACATTCTACGGACTTGCCAACACGGG
TGAGGAGGTCTTTGTCAGTACGGCCCCGGTATACGAAGTTTTGGGCCAAA
TGGCCATGTACGGCATGGTCATAAATGGCGTCCAGGCGGGCGTTTTCGAC
CGCAACTCGTTCCATAATGCGATCTGGAACTTCCAGGTTGGTATCTACTT
GACAGGATATACGCTGTGTCTTGCTTCCTTCTATTGTATGGTACCGCTGC
TGTTCCGGCTGTCATCGGCGGCATTTTTCAACATATCGATGCTGACGATG
AACTTCTGGGGTGTTCTCATCGGGGTCGGGGTGTTTCACTACACAATCCA
CTGGATGTACCCGATTGCTTTCGCGCTCATTATCCTCGGGCAGCTCATCT
ACTATCTGGGGCGGCGCGTGCTGGGAGAAGCGCGCAAACCCTGGCTGGGA
CGGAACCAAGAATGCGGCGTGTCGGGACTGTTTACAGCACGAAGAAAGAT
CGAGACCGCTGCCGGCCGGAGTCGCAGCGACTCCATATCCACGGCTTGTT
CAGAGCGTGATCCTATGCTACCACATGCCAGTGTGGCTGAGGAAGCAGCT
TAGACAGGTTCTGGCTATCACCAACACTGCCTGTAGCACATTCAGCACAC
TACTGGTCAGCGAGGGAACCTCAATCCCGGCTTTTCAGACATTCTTCAAC
TACTTTCTGCTCAATGCTATCTTCACCCCATATACCATATACTGTTATGG
CCTGAAAGGCTGGACACGGGTAGTGCTTCAGCACGGTTGGAAATATGTCC
GATACCAAGGCTCGGCTTGCCGCTCAGAGATCCTCTCCACTCCCCGCTAG
TTACATACCTGTAGCTCAATCCCCGGAGCAGGTTGCTCCCACATTAGAGG
CTCCTCAGAGCGGAGACACCCTACCAGAAGTGCCTGCCACGCATGTCGAA
AAACAAGACAACGTCCTTGCATACCTCGCGACAAAAGAGTTCTACATTAC
CCTTTTCCTCGGATATAATTTTGGCCTTCTGCGACGTGGAAGGTAACTAT
TTCATTGTGCTGGCCTATCGCCATACGACTATGCTGAGCGCCCAGTTGAT
AAATTTCTGGGCCATTGCGGTCGTGCTCATTGTGTCCTTCACAATCTTGC
GCGTGCGTTACCATATCACACAGGTGTTAGGTATTATGATCTGTATTGGC
GGCATGGGCTTCCTGATTGCTTCGGACCGGATCACTGGTGCCGATGACGG
GAACTATTCGCGCGCCGATTTGATCAAAGGCGACCTCTTCGCACTCTTGG
GCGCGACATTCTACGGACTTGCCAACACGGGTGAGGAGGTCTTTGTCAGT
ACGGCCCCGGTATACGAAGTTTTGGGCCAAATGGCCATGTACGGCATGGT
CATAAATGGCGTCCAGGCGGGCGTTTTCGACCGCAACTCGTTCCATAATG
CGATCTGGAACTTCCAGGTTGGTATCTACTTGACAGGATATACGCTGTGT
CTTGCTTCCTTCTATTGTATGGTACCGCTGCTGTTCCGGCTGTCATCGGC
GGCATTTTTCAACATATCGATGCTGACGATGAACTTCTGGGGTGTTCTCA
TCGGGGTCGGGGTGTTTCACTACACAATCCACTGGATGTACCCGATTGCT
TTCGCGCTCATTATCCTCGGGCAGCTCATCTACTATCTGGGGCGGCGCGT
GCTGGGAGAAGCGCGCAAACCCTGGCTGGGACGGAACCAAGAATGCGGCG
TGTCGGGACTGTTTACAGCACGAAGAAAGATCGAGACCGCTGCCGGCCGG
AGTCGCAGCGACTCCATATCCACGGCTTGTTCAGAGCGTGATCCTATGCT
ACCACATGCCAGTGTGGCTGAGGAAGCAGCTTAGACAGGTTCTGGCTATC
ACCAACACTGCCTGTAGCACATTCAGCACACTACTGGTCAGCGAGGGAAC
CTCAATCCCGGCTTTTCAGACATTCTTCAACTACTTTCTGCTCAATGCTA
TCTTCACCCCATATACCATATACTGTTATGGCCTGAAAGGCTGGACACGG
GTAGTGCTTCAGCACGGTTGGAAATATGTCCGATACCAAGGCTCGGCTTG
CCGCTCAGAGATCCTCTCCACTCCCCGCTAGTTACATACCTGTAGCTCAA
TCCCCGGAGCAGGTTGCTCCCACATTAGAGGCTCCTCAGAGCGGAGACAC
CCTACCAGAAGTGCCTGCCACGCATGTCGAAAAACAAGACAACGTCCTTG
CATACCTCGCGACAAAAGAGTTCTACATTACCCTTTTCCTCGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008062KJC3_008062Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008062-T1KJC3_008062-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008062-T1.cdsKJC3_008062-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008062-T1.utr3p1KJC3_008062-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008062-T1.exon3KJC3_008062-T1.exon3Aspergillus niger KJC3exon
KJC3_008062-T1.exon2KJC3_008062-T1.exon2Aspergillus niger KJC3exon
KJC3_008062-T1.exon1KJC3_008062-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008062-T1.utr5p1KJC3_008062-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009262
DBxrefPFAM:PF06027
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:832326..834466 -
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