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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:851894..853514+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008068-T1 ID=KJC3_008068-T1|Name=KJC3_008068-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1621bp|location=Sequence derived from alignment at ch6:851894..853514+ (Aspergillus niger KJC3) ATCTTGAGATCCGGCTATCGCAACGGGAGAAGAATCAATCAACAAGGCGC
ATGATTCAAATTTTTATCAAATATCAGGCTCATATGCTCTGTTGATCAAC
AGACGTATATTCGACACCGAAGACTCAGAATGGCCTTGCCAGAGACACCG
GTCTCTTCGCAGGCGATACTCCTTCCGGTGCTTGCATTCGTCTCCGTCCT
CCTCAGTATCATTCCTCTAGTCCTGCACTGGAAAAACCGAAACTTTGCTG
CAAGCAGTCTAATCTTGTGGTATCTCCTACTCAACATCTTCAATATAGTC
AACGCACTGATCTGGCCGACGGACGACCTTGATTTGTGGTGGGATGGCAA
CGGACTCTGTGATATTGAGGTTAAGATCATGATCGCCAGCTACGTTGCTA
TCCCTGGAACCTTGGTTTGCATTTTTCGCAACTTGGCACAGGTTTTGGAT
ACGAGTCGCGCAAACCTCGTTCCAACTCAATCGCAACGTTGGTGGAATCA
CACCATGGTCCTATCATTCTGTGTAATCGCCCCGGTTATTGCGATGCTTA
CGCACTACGTCTATCAGGCAAGCAGGTACATTCTGTATGCTATTGCTGGT
TGCCTCAATAACTATGACCGGAGCTGGGTGACTCTCGTGCTAGCGTGGAT
CTGGCCACTAATCATCTGTTTGATTGCTGGATACTACTGCGGTTCGTCCA
CTGGCGTCTGGTATCTCGCTTTTCTTGTAGTGAAGGCTAACCTCTGGCTA
GTTATCGTGTTACATCGCCTTACCAAGTACCGAAGCCAGTTCGGGAGCAT
TCTTCAATCAGCCAATAGTAACTTGACCAAGTCGCGATTCATGCGGCTGT
TCCTCATCGCCTTTATCATGCTGTGGGCTATTATTCCAGTTCAAACCTAT
GTAGTTGCATCGAACATTATTGTCACTCAGCCATGGCATTCATACTCGTG
GAGTGTCGCTCACCCACCTAACTGGAACGAGGTGATCAAAGTCCCTGTGG
AGGGCCGTGTTTTCTACGACCGTTGGATTCCGGTGGCTTCGGGATATATG
TTCTTTATCTTCTTCGGTAGTGGGAGAGATGCTCTCGTTATGTACCGCGC
GATCTCGATTTTTCTAGGATTTGGCAACTGCTTTACATCCCTTAAGTCAT
CCTCAGCAAACAGCTCCTCTGCGTCAGGATCCCTGGGCAGCCGGGCAAAG
CTTCTATTCAACAGACGATGGACAACCACCGCAAGGTAAGGAAGCCCTTA
TCCCTTCCAAACGCGCTGCCCGTGCATAACGCTTAAGCTATCCTAGAACA
TCCTCCAAGAATTCCGCCGACGCAATCCGAGCTGCTCATGGTTACCATGA
CCTTGAAATGGGTGCAGTGTCTGGAGCCAAGCAATCACAGTGGATGTCGC
GGTTCAGACTGCTTTGGATGCTACGAAGTCGGCCTTCCTCCGGACAGGAA
ACAGCGGTTCCTCTGCGCCATATTCCCGAACAAACTACCACGATTCGTAC
CAATGCCTGGGCTGGAGTGAGTCAGAGTCGTGGAAGCAGTGACCATGGAG
CCGCGCCACTTTCGGAGGATCATATCCGGGTAAAGCAGGTAATTAGACAG
GAGAGCGAACTTCACGTTTAA back to topCoding sequence (CDS) from alignment at ch6:851894..853514+ >KJC3_008068-T1 ID=KJC3_008068-T1|Name=KJC3_008068-T1|organism=Aspergillus niger KJC3|type=CDS|length=4113bp|location=Sequence derived from alignment at ch6:851894..853514+ (Aspergillus niger KJC3) ATGGCCTTGCCAGAGACACCGGTCTCTTCGCAGGCGATACTCCTTCCGGT GCTTGCATTCGTCTCCGTCCTCCTCAGTATCATTCCTCTAGTCCTGCACT GGAAAAACCGAAACTTTGCTGCAAGCAGTCTAATCTTGTGGTATCTCCTA CTCAACATCTTCAATATAGTCAACGCACTGATCTGGCCGACGGACGACCT TGATTTGTGGTGGGATGGCAACGGACTCTGTGATATTGAGGTTAAGATCA TGATCGCCAGCTACGTTGCTATCCCTGGAACCTTGGTTTGCATTTTTCGC AACTTGGCACAGGTTTTGGATACGAGTCGCGCAAACCTCGTTCCAACTCA ATCGCAACGTTGGTGGAATCACACCATGGTCCTATCATTCTGTGTAATCG CCCCGGTTATTGCGATGCTTACGCACTACGTCTATCAGGCAAGCAGGTAC ATTCTGTATGCTATTGCTGGTTGCCTCAATAACTATGACCGGAGCTGGGT GACTCTCGTGCTAGCGTGGATCTGGCCACTAATCATCTGTTTGATTGCTG GATACTACTGCGTTATCGTGTTACATCGCCTTACCAAGTACCGAAGCCAG TTCGGGAGCATTCTTCAATCAGCCAATAGTAACTTGACCAAGTCGCGATT CATGCGGCTGTTCCTCATCGCCTTTATCATGCTGTGGGCTATTATTCCAG TTCAAACCTATGTAGTTGCATCGAACATTATTGTCACTCAGCCATGGCAT TCATACTCGTGGAGTGTCGCTCACCCACCTAACTGGAACGAGGTGATCAA AGTCCCTGTGGAGGGCCGTGTTTTCTACGACCGTTGGATTCCGGTGGCTT CGGGATATATGTTCTTTATCTTCTTCGGTAGTGGGAGAGATGCTCTCGTT ATGTACCGCGCGATCTCGATTTTTCTAGGATTTGGCAACTGCTTTACATC CCTTAAGTCATCCTCAGCAAACAGCTCCTCTGCGTCAGGATCCCTGGGCA GCCGGGCAAAGCTTCTATTCAACAGACGATGGACAACCACCGCAAGAACA TCCTCCAAGAATTCCGCCGACGCAATCCGAGCTGCTCATGGTTACCATGA CCTTGAAATGGGTGCAGTGTCTGGAGCCAAGCAATCACAGTGGATGTCGC GGTTCAGACTGCTTTGGATGCTACGAAGTCGGCCTTCCTCCGGACAGGAA ACAGCGGTTCCTCTGCGCCATATTCCCGAACAAACTACCACGATTCGTAC CAATGCCTGGGCTGGAGTGAGTCAGAGTCGTGGAAGCAGTGACCATGGAG CCGCGCCACTTTCGGAGGATCATATCCGGGTAAAGCAGGTAATTAGACAG GAGAGCGAACTTCACGTTTAAATGGCCTTGCCAGAGACACCGGTCTCTTC GCAGGCGATACTCCTTCCGGTGCTTGCATTCGTCTCCGTCCTCCTCAGTA TCATTCCTCTAGTCCTGCACTGGAAAAACCGAAACTTTGCTGCAAGCAGT CTAATCTTGTGGTATCTCCTACTCAACATCTTCAATATAGTCAACGCACT GATCTGGCCGACGGACGACCTTGATTTGTGGTGGGATGGCAACGGACTCT GTGATATTGAGGTTAAGATCATGATCGCCAGCTACGTTGCTATCCCTGGA ACCTTGGTTTGCATTTTTCGCAACTTGGCACAGGTTTTGGATACGAGTCG CGCAAACCTCGTTCCAACTCAATCGCAACGTTGGTGGAATCACACCATGG TCCTATCATTCTGTGTAATCGCCCCGGTTATTGCGATGCTTACGCACTAC GTCTATCAGGCAAGCAGGTACATTCTGTATGCTATTGCTGGTTGCCTCAA TAACTATGACCGGAGCTGGGTGACTCTCGTGCTAGCGTGGATCTGGCCAC TAATCATCTGTTTGATTGCTGGATACTACTGCGTTATCGTGTTACATCGC CTTACCAAGTACCGAAGCCAGTTCGGGAGCATTCTTCAATCAGCCAATAG TAACTTGACCAAGTCGCGATTCATGCGGCTGTTCCTCATCGCCTTTATCA TGCTGTGGGCTATTATTCCAGTTCAAACCTATGTAGTTGCATCGAACATT ATTGTCACTCAGCCATGGCATTCATACTCGTGGAGTGTCGCTCACCCACC TAACTGGAACGAGGTGATCAAAGTCCCTGTGGAGGGCCGTGTTTTCTACG ACCGTTGGATTCCGGTGGCTTCGGGATATATGTTCTTTATCTTCTTCGGT AGTGGGAGAGATGCTCTCGTTATGTACCGCGCGATCTCGATTTTTCTAGG ATTTGGCAACTGCTTTACATCCCTTAAGTCATCCTCAGCAAACAGCTCCT CTGCGTCAGGATCCCTGGGCAGCCGGGCAAAGCTTCTATTCAACAGACGA TGGACAACCACCGCAAGAACATCCTCCAAGAATTCCGCCGACGCAATCCG AGCTGCTCATGGTTACCATGACCTTGAAATGGGTGCAGTGTCTGGAGCCA AGCAATCACAGTGGATGTCGCGGTTCAGACTGCTTTGGATGCTACGAAGT CGGCCTTCCTCCGGACAGGAAACAGCGGTTCCTCTGCGCCATATTCCCGA ACAAACTACCACGATTCGTACCAATGCCTGGGCTGGAGTGAGTCAGAGTC GTGGAAGCAGTGACCATGGAGCCGCGCCACTTTCGGAGGATCATATCCGG GTAAAGCAGGTAATTAGACAGGAGAGCGAACTTCACGTTTAAATGGCCTT GCCAGAGACACCGGTCTCTTCGCAGGCGATACTCCTTCCGGTGCTTGCAT TCGTCTCCGTCCTCCTCAGTATCATTCCTCTAGTCCTGCACTGGAAAAAC CGAAACTTTGCTGCAAGCAGTCTAATCTTGTGGTATCTCCTACTCAACAT CTTCAATATAGTCAACGCACTGATCTGGCCGACGGACGACCTTGATTTGT GGTGGGATGGCAACGGACTCTGTGATATTGAGGTTAAGATCATGATCGCC AGCTACGTTGCTATCCCTGGAACCTTGGTTTGCATTTTTCGCAACTTGGC ACAGGTTTTGGATACGAGTCGCGCAAACCTCGTTCCAACTCAATCGCAAC GTTGGTGGAATCACACCATGGTCCTATCATTCTGTGTAATCGCCCCGGTT ATTGCGATGCTTACGCACTACGTCTATCAGGCAAGCAGGTACATTCTGTA TGCTATTGCTGGTTGCCTCAATAACTATGACCGGAGCTGGGTGACTCTCG TGCTAGCGTGGATCTGGCCACTAATCATCTGTTTGATTGCTGGATACTAC TGCGTTATCGTGTTACATCGCCTTACCAAGTACCGAAGCCAGTTCGGGAG CATTCTTCAATCAGCCAATAGTAACTTGACCAAGTCGCGATTCATGCGGC TGTTCCTCATCGCCTTTATCATGCTGTGGGCTATTATTCCAGTTCAAACC TATGTAGTTGCATCGAACATTATTGTCACTCAGCCATGGCATTCATACTC GTGGAGTGTCGCTCACCCACCTAACTGGAACGAGGTGATCAAAGTCCCTG TGGAGGGCCGTGTTTTCTACGACCGTTGGATTCCGGTGGCTTCGGGATAT ATGTTCTTTATCTTCTTCGGTAGTGGGAGAGATGCTCTCGTTATGTACCG CGCGATCTCGATTTTTCTAGGATTTGGCAACTGCTTTACATCCCTTAAGT CATCCTCAGCAAACAGCTCCTCTGCGTCAGGATCCCTGGGCAGCCGGGCA AAGCTTCTATTCAACAGACGATGGACAACCACCGCAAGAACATCCTCCAA GAATTCCGCCGACGCAATCCGAGCTGCTCATGGTTACCATGACCTTGAAA TGGGTGCAGTGTCTGGAGCCAAGCAATCACAGTGGATGTCGCGGTTCAGA CTGCTTTGGATGCTACGAAGTCGGCCTTCCTCCGGACAGGAAACAGCGGT TCCTCTGCGCCATATTCCCGAACAAACTACCACGATTCGTACCAATGCCT GGGCTGGAGTGAGTCAGAGTCGTGGAAGCAGTGACCATGGAGCCGCGCCA CTTTCGGAGGATCATATCCGGGTAAAGCAGGTAATTAGACAGGAGAGCGA ACTTCACGTTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
Term | Definition |
GO:0007186 | G protein-coupled receptor signaling pathway |
Vocabulary: Molecular Function
Term | Definition |
GO:0004932 | mating-type factor pheromone receptor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008068-T1.utr5p1 | KJC3_008068-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR001499 |
DBxref | PFAM:PF02076 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:851894..853514 + |
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