|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:893330..895584+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008074-T1 ID=KJC3_008074-T1|Name=KJC3_008074-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2255bp|location=Sequence derived from alignment at ch6:893330..895584+ (Aspergillus niger KJC3)
AAAGCTTCACCAACAGTTGTGCGTTTTCTGGGCTGTCAACATGGCTACAG
ATACACCTCTTGAGGAAATTGTCAAAAGGCCTCTATATGGTAAGCATTGG
TGTTCGCTCGTCCTTAGATTGGGTCTTTTCTTATTAATACCAAAATGATA
GATGGCTTGCTGACACATTGTGACATCCGAAGTGTACAATCTTCCACAGG
AACTTCTCTCGACGCTAACCACGAAGCATGAAAACCAAGCGATATTAAGA
GCGGACACCCCTGAAGCTGTTGCAGACAAGACCAACGAAGTCGTGTTGGA
TCATGCGGTTGCCTCGACAACAAGTTGTACTCTTTGCAAGGTCTCGTACC
TGAACGTCCAAGAACAACGGAGCCATGTTCGCTCCGACCATCATAGATAT
AACCTGAAGGCCCAGCTTAGAGGAGGTTTAACATTGGACGAGCCTCAATT
TGCAAAAGCGATTGGGGAACTCGACGAGTCTATATCCGGGTCCGAGTCGT
CAGAAGCAGAGGATGAGGAAGAGGAGGATGATCAGCTTTCAGCATTGCTG
AAGAGACAGGCCAAAATCTCTCGGGTAGACGATGAGGATGAAGCACCATC
GAAGAAGAAAACTTCCGGCAGGCCACCACTTTTCTGGCTCGCTAGCACAC
GTCTGCCTTCCAACATGTCCTTGGGTGTCTACCGGGCCCTGTTCTCAAAT
ACTGAACAGGATGAGCCCAGACACCTCGTTGAAACCATTCAAAGGAAGCA
GCTTGCACCTATCATGCCGCCGAGAGCCAATGGAAATGCCCAACAGACGC
CGTCATCCCCCAGCCCTCATGTTTTCATGTGCATGATCGGAGGCGGCCAT
TTCGCCGCAATGCTGGTCTCGCTGGCTCCCGAAATTCATCGGAAGCAGGG
CGGTATCGAGGATAGACAAGCTCGGGTCATTGCGCACAAGACATTTCATC
GTTACACGACCAGACGAAAGCAAGGTGGCTCGCAATCTGCTAATGATGCT
GCCAAGGGGGCCGCGCATTCGGCAGGTTCCAGTCTCAGAAGATACAATGA
AGCTGCGTTAGAGAAGGAGGTCAGAGATTTATTGACCGATTGGAAGCAGA
TGATTGATGAGGCCGAACTATTGTTTGTTCGTGCCACGGGCAGTACAAAT
CGTCGAATCCTTTTCAGCCAGTATGAGGGCCAAGTTCTCAGGCAAAACGA
CCCGAGATTGAGAGGCTTCCCGTTCAGCACCCGTCGGGCAACCCAGGGGG
AGCTGATGCGTTGCTTCAAGGAGCTCACCCGGGTGAAAGTAAGCCAAATC
GACGAAGCCGCGTTGGCGGCTGCAGAGGCCAAGCAACGGGACGAAGTGTC
GAAGCCGTCAACTCCACGGCCTCAACAGCAGAAGCCTAAGGTTTCCAAAG
AAGATGAAGCGGCTATGCTACACACAAGCCAAATTCAGGCTCTCATCCGT
CGTTCTAAGATCCCAGCATTGATGACTTATCTATCTAAGAACTCACTCCC
TGCGTCTTTCGCCTTTCGGCCATCCGACTCTCAGCAAAATTTCCGCTGTC
CCACCCCCCTACACTTCGCTGCCAATCTTAACTCACCATCCATGGTCCTC
GCCCTTTTGACCAAAACCACAGCAGACCCAACAGCGACCAATGGCGAAGG
AAGAACCCCATTCGAGCTTGCTGGGGATCGTGCGACGCGGGACGCCTTTC
GCGTTGCGCGTCATGAGCTAGGCGAGTCGAAGTGGGATTGGGAGGCTACC
AAAGTGCCGTCACCGATCTCTCGAGACGAGGCCAACAGCCGCTCTGAGAG
GGAGCGAAAAACCGCAGAGGAAGAAGAGACGAGTCGACGCAAGGTTGAAA
TGGATCGCTTGAAAAAGGAGGAGGTGGCTAGCGCCGCACAACGCGCCTCC
AAGAAACCAGCTGGTCGAACGCTGGGTTCTGTTGAGAAGACGGCTTCTGA
GAAGAGGGAAGAAGAGATGCGAGGTATGACGCCGGAAATGAGAATGCGGC
TGGAACGGGAACGCCGCGCTAGAGCAGCTGAGGAACGCATTCGACGATTG
CAAGGGAATTGATGAATTTGACTGCTCAACGTTTTCACTCTTTGCTTTCC
CTCAGATCTGTGATGAAGTCATGGCATGTAGCATTGCATTGTACGGAGCG
TATTGATGTCTTTTGATGAATAGAAACGAATGGCCACAGCAGCCAGCAGT
CCATGTTCGGTTGTGCTCTGGCTGGCTATGTCTTGAATTCTGCTTTTTTG
AAACT back to topCoding sequence (CDS) from alignment at ch6:893330..895584+ >KJC3_008074-T1 ID=KJC3_008074-T1|Name=KJC3_008074-T1|organism=Aspergillus niger KJC3|type=CDS|length=3858bp|location=Sequence derived from alignment at ch6:893330..895584+ (Aspergillus niger KJC3)
ATGGCTACAGATACACCTCTTGAGGAAATTGTCAAAAGGCCTCTATATGT
GTACAATCTTCCACAGGAACTTCTCTCGACGCTAACCACGAAGCATGAAA
ACCAAGCGATATTAAGAGCGGACACCCCTGAAGCTGTTGCAGACAAGACC
AACGAAGTCGTGTTGGATCATGCGGTTGCCTCGACAACAAGTTGTACTCT
TTGCAAGGTCTCGTACCTGAACGTCCAAGAACAACGGAGCCATGTTCGCT
CCGACCATCATAGATATAACCTGAAGGCCCAGCTTAGAGGAGGTTTAACA
TTGGACGAGCCTCAATTTGCAAAAGCGATTGGGGAACTCGACGAGTCTAT
ATCCGGGTCCGAGTCGTCAGAAGCAGAGGATGAGGAAGAGGAGGATGATC
AGCTTTCAGCATTGCTGAAGAGACAGGCCAAAATCTCTCGGGTAGACGAT
GAGGATGAAGCACCATCGAAGAAGAAAACTTCCGGCAGGCCACCACTTTT
CTGGCTCGCTAGCACACGTCTGCCTTCCAACATGTCCTTGGGTGTCTACC
GGGCCCTGTTCTCAAATACTGAACAGGATGAGCCCAGACACCTCGTTGAA
ACCATTCAAAGGAAGCAGCTTGCACCTATCATGCCGCCGAGAGCCAATGG
AAATGCCCAACAGACGCCGTCATCCCCCAGCCCTCATGTTTTCATGTGCA
TGATCGGAGGCGGCCATTTCGCCGCAATGCTGGTCTCGCTGGCTCCCGAA
ATTCATCGGAAGCAGGGCGGTATCGAGGATAGACAAGCTCGGGTCATTGC
GCACAAGACATTTCATCGTTACACGACCAGACGAAAGCAAGGTGGCTCGC
AATCTGCTAATGATGCTGCCAAGGGGGCCGCGCATTCGGCAGGTTCCAGT
CTCAGAAGATACAATGAAGCTGCGTTAGAGAAGGAGGTCAGAGATTTATT
GACCGATTGGAAGCAGATGATTGATGAGGCCGAACTATTGTTTGTTCGTG
CCACGGGCAGTACAAATCGTCGAATCCTTTTCAGCCAGTATGAGGGCCAA
GTTCTCAGGCAAAACGACCCGAGATTGAGAGGCTTCCCGTTCAGCACCCG
TCGGGCAACCCAGGGGGAGCTGATGCGTTGCTTCAAGGAGCTCACCCGGG
TGAAAGTAAGCCAAATCGACGAAGCCGCGTTGGCGGCTGCAGAGGCCAAG
CAACGGGACGAAGTGTCGAAGCCGTCAACTCCACGGCCTCAACAGCAGAA
GCCTAAGGTTTCCAAAGAAGATGAAGCGGCTATGCTACACACAAGCCAAA
TTCAGGCTCTCATCCGTCGTTCTAAGATCCCAGCATTGATGACTTATCTA
TCTAAGAACTCACTCCCTGCGTCTTTCGCCTTTCGGCCATCCGACTCTCA
GCAAAATTTCCGCTGTCCCACCCCCCTACACTTCGCTGCCAATCTTAACT
CACCATCCATGGTCCTCGCCCTTTTGACCAAAACCACAGCAGACCCAACA
GCGACCAATGGCGAAGGAAGAACCCCATTCGAGCTTGCTGGGGATCGTGC
GACGCGGGACGCCTTTCGCGTTGCGCGTCATGAGCTAGGCGAGTCGAAGT
GGGATTGGGAGGCTACCAAAGTGCCGTCACCGATCTCTCGAGACGAGGCC
AACAGCCGCTCTGAGAGGGAGCGAAAAACCGCAGAGGAAGAAGAGACGAG
TCGACGCAAGGTTGAAATGGATCGCTTGAAAAAGGAGGAGGTGGCTAGCG
CCGCACAACGCGCCTCCAAGAAACCAGCTGGTCGAACGCTGGGTTCTGTT
GAGAAGACGGCTTCTGAGAAGAGGGAAGAAGAGATGCGAGGTATGACGCC
GGAAATGAGAATGCGGCTGGAACGGGAACGCCGCGCTAGAGCAGCTGAGG
AACGCATTCGACGATTGCAAGGGAATTGAATGGCTACAGATACACCTCTT
GAGGAAATTGTCAAAAGGCCTCTATATGTGTACAATCTTCCACAGGAACT
TCTCTCGACGCTAACCACGAAGCATGAAAACCAAGCGATATTAAGAGCGG
ACACCCCTGAAGCTGTTGCAGACAAGACCAACGAAGTCGTGTTGGATCAT
GCGGTTGCCTCGACAACAAGTTGTACTCTTTGCAAGGTCTCGTACCTGAA
CGTCCAAGAACAACGGAGCCATGTTCGCTCCGACCATCATAGATATAACC
TGAAGGCCCAGCTTAGAGGAGGTTTAACATTGGACGAGCCTCAATTTGCA
AAAGCGATTGGGGAACTCGACGAGTCTATATCCGGGTCCGAGTCGTCAGA
AGCAGAGGATGAGGAAGAGGAGGATGATCAGCTTTCAGCATTGCTGAAGA
GACAGGCCAAAATCTCTCGGGTAGACGATGAGGATGAAGCACCATCGAAG
AAGAAAACTTCCGGCAGGCCACCACTTTTCTGGCTCGCTAGCACACGTCT
GCCTTCCAACATGTCCTTGGGTGTCTACCGGGCCCTGTTCTCAAATACTG
AACAGGATGAGCCCAGACACCTCGTTGAAACCATTCAAAGGAAGCAGCTT
GCACCTATCATGCCGCCGAGAGCCAATGGAAATGCCCAACAGACGCCGTC
ATCCCCCAGCCCTCATGTTTTCATGTGCATGATCGGAGGCGGCCATTTCG
CCGCAATGCTGGTCTCGCTGGCTCCCGAAATTCATCGGAAGCAGGGCGGT
ATCGAGGATAGACAAGCTCGGGTCATTGCGCACAAGACATTTCATCGTTA
CACGACCAGACGAAAGCAAGGTGGCTCGCAATCTGCTAATGATGCTGCCA
AGGGGGCCGCGCATTCGGCAGGTTCCAGTCTCAGAAGATACAATGAAGCT
GCGTTAGAGAAGGAGGTCAGAGATTTATTGACCGATTGGAAGCAGATGAT
TGATGAGGCCGAACTATTGTTTGTTCGTGCCACGGGCAGTACAAATCGTC
GAATCCTTTTCAGCCAGTATGAGGGCCAAGTTCTCAGGCAAAACGACCCG
AGATTGAGAGGCTTCCCGTTCAGCACCCGTCGGGCAACCCAGGGGGAGCT
GATGCGTTGCTTCAAGGAGCTCACCCGGGTGAAAGTAAGCCAAATCGACG
AAGCCGCGTTGGCGGCTGCAGAGGCCAAGCAACGGGACGAAGTGTCGAAG
CCGTCAACTCCACGGCCTCAACAGCAGAAGCCTAAGGTTTCCAAAGAAGA
TGAAGCGGCTATGCTACACACAAGCCAAATTCAGGCTCTCATCCGTCGTT
CTAAGATCCCAGCATTGATGACTTATCTATCTAAGAACTCACTCCCTGCG
TCTTTCGCCTTTCGGCCATCCGACTCTCAGCAAAATTTCCGCTGTCCCAC
CCCCCTACACTTCGCTGCCAATCTTAACTCACCATCCATGGTCCTCGCCC
TTTTGACCAAAACCACAGCAGACCCAACAGCGACCAATGGCGAAGGAAGA
ACCCCATTCGAGCTTGCTGGGGATCGTGCGACGCGGGACGCCTTTCGCGT
TGCGCGTCATGAGCTAGGCGAGTCGAAGTGGGATTGGGAGGCTACCAAAG
TGCCGTCACCGATCTCTCGAGACGAGGCCAACAGCCGCTCTGAGAGGGAG
CGAAAAACCGCAGAGGAAGAAGAGACGAGTCGACGCAAGGTTGAAATGGA
TCGCTTGAAAAAGGAGGAGGTGGCTAGCGCCGCACAACGCGCCTCCAAGA
AACCAGCTGGTCGAACGCTGGGTTCTGTTGAGAAGACGGCTTCTGAGAAG
AGGGAAGAAGAGATGCGAGGTATGACGCCGGAAATGAGAATGCGGCTGGA
ACGGGAACGCCGCGCTAGAGCAGCTGAGGAACGCATTCGACGATTGCAAG
GGAATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008074-T1.utr5p1 | KJC3_008074-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008074-T1.utr3p1 | KJC3_008074-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262BCZ |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR041175 |
| DBxref | InterPro:IPR036770 |
| DBxref | PFAM:PF18826 |
| DBxref | PFAM:PF13857 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:893330..895584 + |
|
