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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:893330..895584+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008074-T2 ID=KJC3_008074-T2|Name=KJC3_008074-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2255bp|location=Sequence derived from alignment at ch6:893330..895584+ (Aspergillus niger KJC3)
AAAGCTTCACCAACAGTTGTGCGTTTTCTGGGCTGTCAACATGGCTACAG
ATACACCTCTTGAGGAAATTGTCAAAAGGCCTCTATATGGTAAGCATTGG
TGTTCGCTCGTCCTTAGATTGGGTCTTTTCTTATTAATACCAAAATGATA
GATGGCTTGCTGACACATTGTGACATCCGAAGTGTACAATCTTCCACAGG
AACTTCTCTCGACGCTAACCACGAAGCATGAAAACCAAGCGATATTAAGA
GCGGACACCCCTGAAGCTGTTGCAGACAAGACCAACGAAGTCGTGTTGGA
TCATGCGGTTGCCTCGACAACAAGTTGTACTCTTTGCAAGGTCTCGTACC
TGAACGTCCAAGAACAACGGAGCCATGTTCGCTCCGACCATCATAGATAT
AACCTGAAGGCCCAGCTTAGAGGAGGTTTAACATTGGACGAGCCTCAATT
TGCAAAAGCGATTGGGGAACTCGACGAGTCTATATCCGGGTCCGAGTCGT
CAGAAGCAGAGGATGAGGAAGAGGAGGATGATCAGCTTTCAGCATTGCTG
AAGAGACAGGCCAAAATCTCTCGGGTAGACGATGAGGATGAAGCACCATC
GAAGAAGAAAACTTCCGGCAGGCCACCACTTTTCTGGCTCGCTAGCACAC
GTCTGCCTTCCAACATGTCCTTGGGTGTCTACCGGGCCCTGTTCTCAAAT
ACTGAACAGGATGAGCCCAGACACCTCGTTGAAACCATTCAAAGGAAGCA
GCTTGCACCTATCATGCCGCCGAGAGCCAATGGAAATGCCCAACAGACGC
CGTCATCCCCCAGCCCTCATGTTTTCATGTGCATGATCGGAGGCGGCCAT
TTCGCCGCAATGCTGGTCTCGCTGGCTCCCGAAATTCATCGGAAGCAGGG
CGGTATCGAGGATAGACAAGCTCGGGTCATTGCGCACAAGACATTTCATC
GTTACACGACCAGACGAAAGCAAGGTGGCTCGCAATCTGCTAATGATGCT
GCCAAGGGGGCCGCGCATTCGGCAGGTTCCAGTCTCAGAAGATACAATGA
AGCTGCGTTAGAGAAGGAGGTCAGAGATTTATTGACCGATTGGAAGCAGA
TGATTGATGAGGCCGAACTATTGTTTGTTCGTGCCACGGGCAGTACAAAT
CGTCGAATCCTTTTCAGCCAGTATGAGGGCCAAGTTCTCAGGCAAAACGA
CCCGAGATTGAGAGGCTTCCCGTTCAGCACCCGTCGGGCAACCCAGGGGG
AGCTGATGCGTTGCTTCAAGGAGCTCACCCGGGTGAAAGTAAGCCAAATC
GACGAAGCCGCGTTGGCGGCTGCAGAGGCCAAGCAACGGGACGAAGTGTC
GAAGCCGTCAACTCCACGGCCTCAACAGCAGAAGCCTAAGGTTTCCAAAG
AAGATGAAGCGGCTATGCTACACACAAGCCAAATTCAGGCTCTCATCCGT
CGTTCTAAGATCCCAGCATTGATGACTTATCTATCTAAGAACTCACTCCC
TGCGTCTTTCGCCTTTCGGCCATCCGACTCTCAGCAAAATTTCCGCTGTC
CCACCCCCCTACACTTCGCTGCCAATCTTAACTCACCATCCATGGTCCTC
GCCCTTTTGACCAAAACCACAGCAGACCCAACAGCGACCAATGGCGAAGG
AAGAACCCCATTCGAGCTTGCTGGGGATCGTGCGACGCGGGACGCCTTTC
GCGTTGCGCGTCATGAGCTAGGCGAGTCGAAGTGGGATTGGGAGGCTACC
AAAGTGCCGTCACCGATCTCTCGAGACGAGGCCAACAGCCGCTCTGAGAG
GGAGCGAAAAACCGCAGAGGAAGAAGAGACGAGTCGACGCAAGGTTGAAA
TGGATCGCTTGAAAAAGGAGGAGGTGGCTAGCGCCGCACAACGCGCCTCC
AAGAAACCAGCTGGTCGAACGCTGGGTTCTGTTGAGAAGACGGCTTCTGA
GAAGAGGGAAGAAGAGATGCGAGGTATGACGCCGGAAATGAGAATGCGGC
TGGAACGGGAACGCCGCGCTAGAGCAGCTGAGGAACGCATTCGACGATTG
CAAGGGAATTGATGAATTTGACTGCTCAACGTTTTCACTCTTTGCTTTCC
CTCAGATCTGTGATGAAGTCATGGCATGTAGCATTGCATTGTACGGAGCG
TATTGATGTCTTTTGATGAATAGAAACGAATGGCCACAGCAGCCAGCAGT
CCATGTTCGGTTGTGCTCTGGCTGGCTATGTCTTGAATTCTGCTTTTTTG
AAACT back to topCoding sequence (CDS) from alignment at ch6:893330..895584+ >KJC3_008074-T2 ID=KJC3_008074-T2|Name=KJC3_008074-T2|organism=Aspergillus niger KJC3|type=CDS|length=1398bp|location=Sequence derived from alignment at ch6:893330..895584+ (Aspergillus niger KJC3)
ATGTCCTTGGGTGTCTACCGGGCCCTGTTCTCAAATACTGAACAGGATGA
GCCCAGACACCTCGTTGAAACCATTCAAAGGAAGCAGCTTGCACCTATCA
TGCCGCCGAGAGCCAATGGAAATGCCCAACAGACGCCGTCATCCCCCAGC
CCTCATGTTTTCATGTGCATGATCGGAGGCGGCCATTTCGCCGCAATGCT
GGTCTCGCTGGCTCCCGAAATTCATCGGAAGCAGGGCGGTATCGAGGATA
GACAAGCTCGGGTCATTGCGCACAAGACATTTCATCGTTACACGACCAGA
CGAAAGCAAGGTGGCTCGCAATCTGCTAATGATGCTGCCAAGGGGGCCGC
GCATTCGGCAGGTTCCAGTCTCAGAAGATACAATGAAGCTGCGTTAGAGA
AGGAGGTCAGAGATTTATTGACCGATTGGAAGCAGATGATTGATGAGGCC
GAACTATTGTTTGTTCGTGCCACGGGCAGTACAAATCGTCGAATCCTTTT
CAGCCAGTATGAGGGCCAAGTTCTCAGGCAAAACGACCCGAGATTGAGAG
GCTTCCCGTTCAGCACCCGTCGGGCAACCCAGGGGGAGCTGATGCGTTGC
TTCAAGGAGCTCACCCGGGTGAAAGTAAGCCAAATCGACGAAGCCGCGTT
GGCGGCTGCAGAGGCCAAGCAACGGGACGAAGTGTCGAAGCCGTCAACTC
CACGGCCTCAACAGCAGAAGCCTAAGGTTTCCAAAGAAGATGAAGCGGCT
ATGCTACACACAAGCCAAATTCAGGCTCTCATCCGTCGTTCTAAGATCCC
AGCATTGATGACTTATCTATCTAAGAACTCACTCCCTGCGTCTTTCGCCT
TTCGGCCATCCGACTCTCAGCAAAATTTCCGCTGTCCCACCCCCCTACAC
TTCGCTGCCAATCTTAACTCACCATCCATGGTCCTCGCCCTTTTGACCAA
AACCACAGCAGACCCAACAGCGACCAATGGCGAAGGAAGAACCCCATTCG
AGCTTGCTGGGGATCGTGCGACGCGGGACGCCTTTCGCGTTGCGCGTCAT
GAGCTAGGCGAGTCGAAGTGGGATTGGGAGGCTACCAAAGTGCCGTCACC
GATCTCTCGAGACGAGGCCAACAGCCGCTCTGAGAGGGAGCGAAAAACCG
CAGAGGAAGAAGAGACGAGTCGACGCAAGGTTGAAATGGATCGCTTGAAA
AAGGAGGAGGTGGCTAGCGCCGCACAACGCGCCTCCAAGAAACCAGCTGG
TCGAACGCTGGGTTCTGTTGAGAAGACGGCTTCTGAGAAGAGGGAAGAAG
AGATGCGAGGTATGACGCCGGAAATGAGAATGCGGCTGGAACGGGAACGC
CGCGCTAGAGCAGCTGAGGAACGCATTCGACGATTGCAAGGGAATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008074-T2.utr3p1 | KJC3_008074-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR041175 |
| DBxref | InterPro:IPR036770 |
| DBxref | PFAM:PF18826 |
| DBxref | PFAM:PF13857 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:893330..895584 + |
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