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KJC3_008077-T1, KJC3_008077-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008077-T1
Unique NameKJC3_008077-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:903720..905670-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008077-T1 ID=KJC3_008077-T1|Name=KJC3_008077-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1951bp|location=Sequence derived from alignment at ch6:903720..905670- (Aspergillus niger KJC3)
CCCCCTCATCCCTCATTCCTCTCCGATCCCCCCTTTCCTTTCTTCTCCTA
CTTCTCTTTTTCCCCCTCACCCCCCTTCCCTCATCCTCCGCAGCGCCCTT
TCACAATGCTCTCTGGTATCCTCATTTTCAACCAAAAGGGCGAGAACCTA
ATTTTCCGCGCTTTCCGCAGCGACTGCCGCCCGCGCCTCGCCGACATCTT
CCGCATCCAGGTCATCTCCAACCCTCAGGTCCGCTCGCCCATCCTCACCC
TAGGCTCCACGACTTTCAGTCATGTCAAACACGAGAACATCTACCTGGTC
GCCGTGACTAAGAGCAATGCCAATGCCGCGCTGGTCTTCGAATTCCTATA
CCGACTGGTTATGCTGGGAAAGAGCTATTTTGGGAAGCTCGATGAGGAGG
CCGTGAAGAACAACTTTGTCCTAATTTACGAATTGCTCGACGGTGCGCCT
CACCTGTGCTTTCGAGCATACAACCCACCTGAAAGATTGCTAAACCGCAT
TTGCCTCTTTGATAGAAATCCTGGACTTCGGATACCCTCAAAACACCGAG
ACGGACACCTTGAAAATGTACATCACCACCGAAGGCGTCAAATCCGCCAT
TGCCAATTCCGCGACCGACTCCAGCCGTATTACCATGCAAGCCACTGGCG
CTCTCTCCTGGCGCCGTTCCGATGTCAAATACCGCAAGAATGAGGCCTTT
GTCGACGTGATTGAAGACGTCAACCTCCTCATGTCCGCCACAGGCACCGT
CCTTCGCGCCGATGTCAACGGCCAAATCGTCATGCGAGCTTACCTCTCCG
GCACCCCAGAGTGCAAATTCGGCCTTAATGACCGCTTACTCCTCGATACC
GACGCTGCCGGCTCCTCCACCCCAGGCAACCGCGACGGCACGATGAAGGC
TACCCGCGCGGCCGCGGGCTCTGTCACCCTCGAAGACTGCCAATTTCACC
AGTGCGTCAAGCTGGGCCGCTTCGACGCCGATCGGATTATCTCCTTTGTG
CCTCCCGATGGCGAGTTTGAGCTCATGCGCTACCGCGCTACCGAAAACGT
GAATTTGCCCTTCAAGGTTCATCCGATTGTGCGTGAAGTCGGCACCACCA
AAGTGGAATACAGCGTCGCTATTAAAGCAAACTACAGCTCGAAATTATTC
GCGACAAACGTTGTGATTCGCATTCCAACACCGCTGAACACCGCCAAGAC
GACGGAACGGACCAGCCAGGGTCGGGCAAAGTACGAGCCGGAACATAATA
ACATTGTGTGGAAGATTGCGCGGTTTTCCGGTGGAAGCGAATACGTCCTG
ACAGCAGAAGCGACGTTGACGAGCATGACACACCAGAAGGCGTGGAGTCG
GCCACCGCTCAGTCTATCATTCAGTCTTCTCATGTTCACCAGCAGTGGAT
TACTGGTGCGGTACCTGAAGGTATTTGAGAAGAGCAACTATAGCAGTGTG
AAGTGGGTGCGGTACATGACTCGCGCGGGCAGTTATGAAATTCGGTACGT
TTAATGCGAACTCCTTGCCTGAATTATTGTGGGGGTGACTGCTGTGCTAA
CTCCAAGCGAAACAGATTCTAGTTTGATATAATAGTCTACAAGCTATTAC
TGCAGGCAGGGTGGCCGATGCTACGATCCCCTATCTGTAACTCAATAGCT
TACATTCCGTCTCCCGACCTTTGAGCTTGGTGTCTGGCGTTGACTGATCG
ATTGCACGTTTCATGTTGGGTGTACTGCTGTACTCATACTAGGTTCTGTT
CTCTTATTGCACATAGGGGTTGATTGATGCATGGCATAATGGCACTAAAG
GGTTGGTCATGGACATACTTAAATGGCTTGGTAGTTCGATTTTTGTTACA
TTTAGCCGGAGTACTTACTGCCTTATTATTGGTGCTAACTACTTACTACA
TCTGGCCAAAATACATGTTTCTACTCAAGTTATAGTAGCAATAAATTTTA
G
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Coding sequence (CDS) from alignment at ch6:903720..905670-

>KJC3_008077-T1 ID=KJC3_008077-T1|Name=KJC3_008077-T1|organism=Aspergillus niger KJC3|type=CDS|length=3969bp|location=Sequence derived from alignment at ch6:903720..905670- (Aspergillus niger KJC3)
ATTCTAGAAATCCTGGACTTCGGATACCCTCAAAACACCGAGACGGACAC
CTTGAAAATGTACATCACCACCGAAGGCGTCAAATCCGCCATTGCCAATT
CCGCGACCGACTCCAGCCGTATTACCATGCAAGCCACTGGCGCTCTCTCC
TGGCGCCGTTCCGATGTCAAATACCGCAAGAATGAGGCCTTTGTCGACGT
GATTGAAGACGTCAACCTCCTCATGTCCGCCACAGGCACCGTCCTTCGCG
CCGATGTCAACGGCCAAATCGTCATGCGAGCTTACCTCTCCGGCACCCCA
GAGTGCAAATTCGGCCTTAATGACCGCTTACTCCTCGATACCGACGCTGC
CGGCTCCTCCACCCCAGGCAACCGCGACGGCACGATGAAGGCTACCCGCG
CGGCCGCGGGCTCTGTCACCCTCGAAGACTGCCAATTTCACCAGTGCGTC
AAGCTGGGCCGCTTCGACGCCGATCGGATTATCTCCTTTGTGCCTCCCGA
TGGCGAGTTTGAGCTCATGCGCTACCGCGCTACCGAAAACGTGAATTTGC
CCTTCAAGGTTCATCCGATTGTGCGTGAAGTCGGCACCACCAAAGTGGAA
TACAGCGTCGCTATTAAAGCAAACTACAGCTCGAAATTATTCGCGACAAA
CGTTGTGATTCGCATTCCAACACCGCTGAACACCGCCAAGACGACGGAAC
GGACCAGCCAGGGTCGGGCAAAGTACGAGCCGGAACATAATAACATTGTG
TGGAAGATTGCGCGGTTTTCCGGTGGAAGCGAATACGTCCTGACAGCAGA
AGCGACGTTGACGAGCATGACACACCAGAAGGCGTGGAGTCGGCCACCGC
TCAGTCTATCATTCAGTCTTCTCATGTTCACCAGCAGTGGATTACTGGTG
CGGTACCTGAAGGTATTTGAGAAGAGCAACTATAGCAGTGTGAAGTGGGT
GCGGTACATGACTCGCGCGGGCAGTTATGAAATTCGATGCTCTCTGGTAT
CCTCATTTTCAACCAAAAGGGCGAGAACCTAATTTTCCGCGCTTTCCGCA
GCGACTGCCGCCCGCGCCTCGCCGACATCTTCCGCATCCAGGTCATCTCC
AACCCTCAGGTCCGCTCGCCCATCCTCACCCTAGGCTCCACGACTTTCAG
TCATGTCAAACACGAGAACATCTACCTGGTCGCCGTGACTAAGAGCAATG
CCAATGCCGCGCTGGTCTTCGAATTCCTATACCGACTGGTTATGCTGGGA
AAGAGCTATTTTGGGAAGCTCGATGAGGAGGCCGTGAAGAACAACTTTGT
CCTAATTTACGAATTGCTCGACGATTCTAGAAATCCTGGACTTCGGATAC
CCTCAAAACACCGAGACGGACACCTTGAAAATGTACATCACCACCGAAGG
CGTCAAATCCGCCATTGCCAATTCCGCGACCGACTCCAGCCGTATTACCA
TGCAAGCCACTGGCGCTCTCTCCTGGCGCCGTTCCGATGTCAAATACCGC
AAGAATGAGGCCTTTGTCGACGTGATTGAAGACGTCAACCTCCTCATGTC
CGCCACAGGCACCGTCCTTCGCGCCGATGTCAACGGCCAAATCGTCATGC
GAGCTTACCTCTCCGGCACCCCAGAGTGCAAATTCGGCCTTAATGACCGC
TTACTCCTCGATACCGACGCTGCCGGCTCCTCCACCCCAGGCAACCGCGA
CGGCACGATGAAGGCTACCCGCGCGGCCGCGGGCTCTGTCACCCTCGAAG
ACTGCCAATTTCACCAGTGCGTCAAGCTGGGCCGCTTCGACGCCGATCGG
ATTATCTCCTTTGTGCCTCCCGATGGCGAGTTTGAGCTCATGCGCTACCG
CGCTACCGAAAACGTGAATTTGCCCTTCAAGGTTCATCCGATTGTGCGTG
AAGTCGGCACCACCAAAGTGGAATACAGCGTCGCTATTAAAGCAAACTAC
AGCTCGAAATTATTCGCGACAAACGTTGTGATTCGCATTCCAACACCGCT
GAACACCGCCAAGACGACGGAACGGACCAGCCAGGGTCGGGCAAAGTACG
AGCCGGAACATAATAACATTGTGTGGAAGATTGCGCGGTTTTCCGGTGGA
AGCGAATACGTCCTGACAGCAGAAGCGACGTTGACGAGCATGACACACCA
GAAGGCGTGGAGTCGGCCACCGCTCAGTCTATCATTCAGTCTTCTCATGT
TCACCAGCAGTGGATTACTGGTGCGGTACCTGAAGGTATTTGAGAAGAGC
AACTATAGCAGTGTGAAGTGGGTGCGGTACATGACTCGCGCGGGCAGTTA
TGAAATTCGATGCTCTCTGGTATCCTCATTTTCAACCAAAAGGGCGAGAA
CCTAATTTTCCGCGCTTTCCGCAGCGACTGCCGCCCGCGCCTCGCCGACA
TCTTCCGCATCCAGGTCATCTCCAACCCTCAGGTCCGCTCGCCCATCCTC
ACCCTAGGCTCCACGACTTTCAGTCATGTCAAACACGAGAACATCTACCT
GGTCGCCGTGACTAAGAGCAATGCCAATGCCGCGCTGGTCTTCGAATTCC
TATACCGACTGGTTATGCTGGGAAAGAGCTATTTTGGGAAGCTCGATGAG
GAGGCCGTGAAGAACAACTTTGTCCTAATTTACGAATTGCTCGACGATTC
TAGAAATCCTGGACTTCGGATACCCTCAAAACACCGAGACGGACACCTTG
AAAATGTACATCACCACCGAAGGCGTCAAATCCGCCATTGCCAATTCCGC
GACCGACTCCAGCCGTATTACCATGCAAGCCACTGGCGCTCTCTCCTGGC
GCCGTTCCGATGTCAAATACCGCAAGAATGAGGCCTTTGTCGACGTGATT
GAAGACGTCAACCTCCTCATGTCCGCCACAGGCACCGTCCTTCGCGCCGA
TGTCAACGGCCAAATCGTCATGCGAGCTTACCTCTCCGGCACCCCAGAGT
GCAAATTCGGCCTTAATGACCGCTTACTCCTCGATACCGACGCTGCCGGC
TCCTCCACCCCAGGCAACCGCGACGGCACGATGAAGGCTACCCGCGCGGC
CGCGGGCTCTGTCACCCTCGAAGACTGCCAATTTCACCAGTGCGTCAAGC
TGGGCCGCTTCGACGCCGATCGGATTATCTCCTTTGTGCCTCCCGATGGC
GAGTTTGAGCTCATGCGCTACCGCGCTACCGAAAACGTGAATTTGCCCTT
CAAGGTTCATCCGATTGTGCGTGAAGTCGGCACCACCAAAGTGGAATACA
GCGTCGCTATTAAAGCAAACTACAGCTCGAAATTATTCGCGACAAACGTT
GTGATTCGCATTCCAACACCGCTGAACACCGCCAAGACGACGGAACGGAC
CAGCCAGGGTCGGGCAAAGTACGAGCCGGAACATAATAACATTGTGTGGA
AGATTGCGCGGTTTTCCGGTGGAAGCGAATACGTCCTGACAGCAGAAGCG
ACGTTGACGAGCATGACACACCAGAAGGCGTGGAGTCGGCCACCGCTCAG
TCTATCATTCAGTCTTCTCATGTTCACCAGCAGTGGATTACTGGTGCGGT
ACCTGAAGGTATTTGAGAAGAGCAACTATAGCAGTGTGAAGTGGGTGCGG
TACATGACTCGCGCGGGCAGTTATGAAATTCGATGCTCTCTGGTATCCTC
ATTTTCAACCAAAAGGGCGAGAACCTAATTTTCCGCGCTTTCCGCAGCGA
CTGCCGCCCGCGCCTCGCCGACATCTTCCGCATCCAGGTCATCTCCAACC
CTCAGGTCCGCTCGCCCATCCTCACCCTAGGCTCCACGACTTTCAGTCAT
GTCAAACACGAGAACATCTACCTGGTCGCCGTGACTAAGAGCAATGCCAA
TGCCGCGCTGGTCTTCGAATTCCTATACCGACTGGTTATGCTGGGAAAGA
GCTATTTTGGGAAGCTCGATGAGGAGGCCGTGAAGAACAACTTTGTCCTA
ATTTACGAATTGCTCGACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030131clathrin adaptor complex
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
GO:0006886intracellular protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008077KJC3_008077Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008077-T1KJC3_008077-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008077-T1.cdsKJC3_008077-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008077-T1.utr3p1KJC3_008077-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008077-T1.exon3KJC3_008077-T1.exon3Aspergillus niger KJC3exon
KJC3_008077-T1.exon2KJC3_008077-T1.exon2Aspergillus niger KJC3exon
KJC3_008077-T1.exon1KJC3_008077-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008077-T1.utr5p1KJC3_008077-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR036168
DBxrefInterPro:IPR043512
DBxrefInterPro:IPR028565
DBxrefInterPro:IPR022775
DBxrefInterPro:IPR001392
DBxrefPFAM:PF01217
DBxrefPFAM:PF00928
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:903720..905670 -
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