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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:909904..911719+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008079-T1 ID=KJC3_008079-T1|Name=KJC3_008079-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1816bp|location=Sequence derived from alignment at ch6:909904..911719+ (Aspergillus niger KJC3)
TACAAGTCTTGTTCAATCGTCTATACTTCGCTACTGCTCCCTTCAACCGT
GATAAGGGGACCAAGTAGAATAATTCATCTCTAATATCTTCGGTTCCTTT
AAGCCAAGACGGGTGGGACGTCCTGCGCACCTTTTCCTTGTCTCTCCAGT
CAAAGTGTTCGCATCCATCCATGTCGGACTCTCCCAACGCAGCTTCCGTC
TCCTACATTTGACGCCGCTTCCGCTCGCCATCTGCAATATTAGTATTACT
CTGCGCACTACAAACAGCTGTGGTCCAGCTCAAATCTATTGTACTTCATT
CCTGCGTTTGTACCATCAACGGCGCCAAGGGATGAAAGTAGCAACGCTGC
AGTTTGCCCCTCGTTTGGGCGATGTCGATGGGAATATTAAGAGAGCCAAT
GAACTTCTCAAGAACGGGAAGGTAGTGCGGGGCGTTGGCATTGGGGTTGG
ACTTGATCTCCTGAAGCCGGATGTTTTGATTTTGCCCGAGTTGGCCTTGA
CGGGTAAGTGTTACTCTGTCCTCCCCATGGGTGTCACACGACGCATGAGC
TTCGGGATGTTTGTGCTCGGTGGCTTGTTCCCTGCGTCTTAGCCTGGAGC
TCTTACCTCTACCAACATCCGTTGAGACTCCCTTCCACCCCCGGACTTCT
CTACGCAGCACGATCATTGATTTGGCCAGGATACAACTTCCCCTCGTTGG
AGGCTATAAGACCCTTCCTTGAGCCCGTTGGACAAGGTCCTTCCGCGCAG
TGGGCTCGAGAAACGGCAAAATGCTTCAATTGCAAAGTCTGCGTGGGCTA
TCCGGAAGTCTACCGAGGAGATGATGCCCAGCAGGCTGATTCATCTAACC
CCACAGAGACTTGCTACAACTCCCTTCTGGTGGTGGACGAAACCGGTGAT
ATCATCCTAAACTACCGTAAATCGTTCTTATACTACACGGATGAGACGTG
GGCGGCTGAGGGCAACCCTCAGCAAGGCTACCACCAGCTCTCCTTCCCAA
ACTCGAGTCAAAGCTCGGTGGAGTCCCAGATAGCTACCTCTTTCGGCATC
TGTATGGACATCAACCCATACCGGTTCGAGGCTCCCTTTACTGCCTGGGA
ATTTGCTAATCGGGTCTTGGATACGAACTCTGAGCTGGTCATACTTTCTA
TGGCTTGGCTGACCTTGTTGGAGCGGAACGAGCTCGACTCACTCGGTGAT
GAGCCGGACTTAGACACTTTCAATTACTGGATCCAGCGGTTCATGCCGCT
TATCAGGAAGAAGATGGGCCATGAGACCAACTTCGATGGCGATGATGCTA
GTCACGGAAAGAAGATTATCATTGTGTTTGCCAACAGAGCCGGAGAAGAA
CCGGGTGCGGAAGGGACAAACCCAGCTCGGTACGCGGGCACGAGTGCTAT
CGTAGCAATCACACAGAAACCAACAATCCGTACATGGAGTAAGGAAACTT
CTATTGAAGAAGGAGATCCTGGTGCCGATACAGATGCCGCTGAGACAGAT
GCACCGTCATTTGATACGAAAATTCTATGTTGGGATATGATGGGTGCGAC
GACGGAAGGTATTTGTTTTGCCGACACTACGGCAGACCCCAGCATGGTGT
TTGGATTGGTCAAAGCTTCAAAATGACATTCCAACTGCACTTGAGTTCAA
AGCCACCTCGGAATTGGTGGGTTGCAGCCTGGAGTGTTGCCCTGCCTATT
AAGTTTATTTCAGATGGCGTCACTTGAGTCGGCGTTCGTAAATCAAATAG
ATAGTATACTAGAGGTGCTTTGGGCTTGGAATCTATAACGAATAAGAGTC
GCAATGCATGTCCAAG back to topCoding sequence (CDS) from alignment at ch6:909904..911719+ >KJC3_008079-T1 ID=KJC3_008079-T1|Name=KJC3_008079-T1|organism=Aspergillus niger KJC3|type=CDS|length=2238bp|location=Sequence derived from alignment at ch6:909904..911719+ (Aspergillus niger KJC3)
ATGAAAGTAGCAACGCTGCAGTTTGCCCCTCGTTTGGGCGATGTCGATGG
GAATATTAAGAGAGCCAATGAACTTCTCAAGAACGGGAAGGTAGTGCGGG
GCGTTGGCATTGGGGTTGGACTTGATCTCCTGAAGCCGGATGTTTTGATT
TTGCCCGAGTTGGCCTTGACGGGATACAACTTCCCCTCGTTGGAGGCTAT
AAGACCCTTCCTTGAGCCCGTTGGACAAGGTCCTTCCGCGCAGTGGGCTC
GAGAAACGGCAAAATGCTTCAATTGCAAAGTCTGCGTGGGCTATCCGGAA
GTCTACCGAGGAGATGATGCCCAGCAGGCTGATTCATCTAACCCCACAGA
GACTTGCTACAACTCCCTTCTGGTGGTGGACGAAACCGGTGATATCATCC
TAAACTACCGTAAATCGTTCTTATACTACACGGATGAGACGTGGGCGGCT
GAGGGCAACCCTCAGCAAGGCTACCACCAGCTCTCCTTCCCAAACTCGAG
TCAAAGCTCGGTGGAGTCCCAGATAGCTACCTCTTTCGGCATCTGTATGG
ACATCAACCCATACCGGTTCGAGGCTCCCTTTACTGCCTGGGAATTTGCT
AATCGGGTCTTGGATACGAACTCTGAGCTGGTCATACTTTCTATGGCTTG
GCTGACCTTGTTGGAGCGGAACGAGCTCGACTCACTCGGTGATGAGCCGG
ACTTAGACACTTTCAATTACTGGATCCAGCGGTTCATGCCGCTTATCAGG
AAGAAGATGGGCCATGAGACCAACTTCGATGGCGATGATGCTAGTCACGG
AAAGAAGATTATCATTGTGTTTGCCAACAGAGCCGGAGAAGAACCGGGTG
CGGAAGGGACAAACCCAGCTCGGTACGCGGGCACGAGTGCTATCGTAGCA
ATCACACAGAAACCAACAATCCGTACATGGAGTAAGGAAACTTCTATTGA
AGAAGGAGATCCTGGTGCCGATACAGATGCCGCTGAGACAGATGCACCGT
CATTTGATACGAAAATTCTATGTTGGGATATGATGGGTGCGACGACGGAA
GGTATTTGTTTTGCCGACACTACGGCAGACCCCAGCATGGTGTTTGGATT
GGTCAAAGCTTCAAAATGAATGAAAGTAGCAACGCTGCAGTTTGCCCCTC
GTTTGGGCGATGTCGATGGGAATATTAAGAGAGCCAATGAACTTCTCAAG
AACGGGAAGGTAGTGCGGGGCGTTGGCATTGGGGTTGGACTTGATCTCCT
GAAGCCGGATGTTTTGATTTTGCCCGAGTTGGCCTTGACGGGATACAACT
TCCCCTCGTTGGAGGCTATAAGACCCTTCCTTGAGCCCGTTGGACAAGGT
CCTTCCGCGCAGTGGGCTCGAGAAACGGCAAAATGCTTCAATTGCAAAGT
CTGCGTGGGCTATCCGGAAGTCTACCGAGGAGATGATGCCCAGCAGGCTG
ATTCATCTAACCCCACAGAGACTTGCTACAACTCCCTTCTGGTGGTGGAC
GAAACCGGTGATATCATCCTAAACTACCGTAAATCGTTCTTATACTACAC
GGATGAGACGTGGGCGGCTGAGGGCAACCCTCAGCAAGGCTACCACCAGC
TCTCCTTCCCAAACTCGAGTCAAAGCTCGGTGGAGTCCCAGATAGCTACC
TCTTTCGGCATCTGTATGGACATCAACCCATACCGGTTCGAGGCTCCCTT
TACTGCCTGGGAATTTGCTAATCGGGTCTTGGATACGAACTCTGAGCTGG
TCATACTTTCTATGGCTTGGCTGACCTTGTTGGAGCGGAACGAGCTCGAC
TCACTCGGTGATGAGCCGGACTTAGACACTTTCAATTACTGGATCCAGCG
GTTCATGCCGCTTATCAGGAAGAAGATGGGCCATGAGACCAACTTCGATG
GCGATGATGCTAGTCACGGAAAGAAGATTATCATTGTGTTTGCCAACAGA
GCCGGAGAAGAACCGGGTGCGGAAGGGACAAACCCAGCTCGGTACGCGGG
CACGAGTGCTATCGTAGCAATCACACAGAAACCAACAATCCGTACATGGA
GTAAGGAAACTTCTATTGAAGAAGGAGATCCTGGTGCCGATACAGATGCC
GCTGAGACAGATGCACCGTCATTTGATACGAAAATTCTATGTTGGGATAT
GATGGGTGCGACGACGGAAGGTATTTGTTTTGCCGACACTACGGCAGACC
CCAGCATGGTGTTTGGATTGGTCAAAGCTTCAAAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006807 | nitrogen compound metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008079-T1.utr5p1 | KJC3_008079-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008079-T1.utr3p1 | KJC3_008079-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003010 |
| DBxref | InterPro:IPR036526 |
| DBxref | PFAM:PF00795 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:909904..911719 + |
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