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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:914135..916323+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008080-T1 ID=KJC3_008080-T1|Name=KJC3_008080-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2189bp|location=Sequence derived from alignment at ch6:914135..916323+ (Aspergillus niger KJC3)
CCTCTACTCTCTTTGGCCTCTTGTCTCCTCCGCGGTTCTTCCACGGCCAG
AAGCATCGCCATCGCATCATGGCTTCTGCTTTGGCTTGCCCCCTTGTCTT
CTCTCTCTCCGTCATGGCCCGGTCGGGCGATGGCCGAGGATGATGATGCT
GTTTTTTCCCGCTTCCATCGGGAGGTGGGCGCGTCAGCAAACGCGTTACT
AGCTCACAACCCAACCAGATCTGCCTCACCTGTGCACAACAGCAACTGTA
GCCCTTCACTGGGGACCCTTCAATGCCTCCTTCACAAATCAATGAATGAT
ACCACTTTCTTCCCTTGCAATATTGTTACTTTCTGTCCTCCGCCGGATCT
GTTTCCTACACCATCTTGAACCGTACTGATCGTGCAAAAGCGACTTTGTC
ACTAACAGAATTTCTAGAGTCAACGAGAATCGCCTAATCTCTCCGATTAG
GCCCCTAGAGCTGGAGCGAAACTCCGGTAACTACACTGAATCCCTATCGT
TAGCAGGTAAGTGCGTTTCGGACGTGGTGGCTGGCTCTCCAAATGACACG
CTGCGATACTAACCGCTACGCACAGGGCAGTCATATCATACATACCTAAC
GATGTCCGATCCGTCGTTGGGTGCTACCGATGGTAGTGTTACAGCCAAGC
GAAAGCGCGATAGTACCGATAGCACCGGTCCAGATGCCCAGCGTCTGAAT
CGATCTTCCAATGGGAGCAACGGCAGCATTCCCGCCCCAGATACTCAGCC
GAACTTCGCCCATAGCTCTCTTGGATCCTATGACGCGCATCTTCCAAGCG
CTACGACAGAACTCAACATCGACCAGCAAATTCTGCAACATGTTGGTCCT
CAAAACGGTATCTCGGATGACAATGCCCTCACTGCCAAGGCGGCACTCGC
CGCCCACACCCCTCAGAACAAATACCCGCCTCCCCCGGATGCGACCTTTG
ACAATAATCTCGCCCACGGCTTGACGTTCGGAGACGACATGGGCCAGGCT
ATCGGCTCCGCACATGGTCACAATTCTACTGCTGCCGCCGTTTACGCTGC
TCGCGAAGCACAGAGCATGAACCAGAAGCCTTCCGTAGGTTCTCCGGAAT
GGCATCAGATCCGTAAAAACAATCACAAAGAAGGTACAGCAATACATTCC
CCTCTCCATTTCTCATAGTGCACCCACTAACGGGGACTTAGTGGAGCGGC
GACGCCGTGAGGCGATCAATGAGGGCATCAATCAGATTGCTCGCCTTGTC
CCCAACTGTGACAAGAACAAGGGCGCCATCCTGCAACGCGCAATTGAATA
TATATGCCAACTACACGAAGAAAAGAAAGCCATGAGTGAACGCTGGGATC
AGAACAATATGACCACAAGCCATGCTATCAACGAAATTAGTTCGCAGAAC
TCCAAACTGAAGATTGAGGTCAACCGTCGGGGTGACATTGCGCTGAAGTG
GTTGCAGCGCTGCCGCGACGCAGGTCTTGAGTTCGAAGACTACGAAGACT
CGAAGGAGCTGGAGCCCCTTGACATTGACCAAGGCCAGGTTTAATCTCGA
GTAACTTGCATTACTGCGCGTGCAGACAATGTGGTGAGAGAATCACTGCA
TGATCCCCTTCCTTTATACTCACATGTGCTACGACTTGTTTACCTTGGGA
GCCATTGAGATAGCGTCGATCTTGTCGCTTGCTTTCCTCCCTCTTCCCTT
TCCTCTAACCTTTATCCTAACAGATTCTCCCCTTTCTTTTGAACAGACCT
TGCCTGATCTCTCCCTGTTTCCACTTTTATTTTCCATGTCAGTTATTTGC
AAGGTACAGTCTTACGATGTCCGGTTTTTGTTGTGAGGGACACGATGTGG
TTCTCCAGTTTTTATTTTAATTGCTTAGCCTGGGGTGGGTATCCTGTTTC
TATTTCCCCGTATCTGCTTTTACCCCTGCTGTGATTCTTTCTGTATGCTA
TTCTTAAGGATGGGACGGCGAAACTATGGCTGGGAGTGGATGATCCGATG
GCCATGCAGCCTAGGACACCACGGCGTGTTATCGGAATGCAAGCTCATTT
CAAGTCTGATCTCCGTATGGTTCTAGTAATGATTTAGTGAGCAGAGCAGA
TATCGGATAAGGAATCAAACATAAGAGTGATTTGTCCAGTAGATGCAAGG
TCCTGCCTGCAATAGAACCAATAGAGTAATAGATCACAT back to topCoding sequence (CDS) from alignment at ch6:914135..916323+ >KJC3_008080-T1 ID=KJC3_008080-T1|Name=KJC3_008080-T1|organism=Aspergillus niger KJC3|type=CDS|length=1770bp|location=Sequence derived from alignment at ch6:914135..916323+ (Aspergillus niger KJC3)
ATGTCCGATCCGTCGTTGGGTGCTACCGATGGTAGTGTTACAGCCAAGCG
AAAGCGCGATAGTACCGATAGCACCGGTCCAGATGCCCAGCGTCTGAATC
GATCTTCCAATGGGAGCAACGGCAGCATTCCCGCCCCAGATACTCAGCCG
AACTTCGCCCATAGCTCTCTTGGATCCTATGACGCGCATCTTCCAAGCGC
TACGACAGAACTCAACATCGACCAGCAAATTCTGCAACATGTTGGTCCTC
AAAACGGTATCTCGGATGACAATGCCCTCACTGCCAAGGCGGCACTCGCC
GCCCACACCCCTCAGAACAAATACCCGCCTCCCCCGGATGCGACCTTTGA
CAATAATCTCGCCCACGGCTTGACGTTCGGAGACGACATGGGCCAGGCTA
TCGGCTCCGCACATGGTCACAATTCTACTGCTGCCGCCGTTTACGCTGCT
CGCGAAGCACAGAGCATGAACCAGAAGCCTTCCGTAGGTTCTCCGGAATG
GCATCAGATCCGTAAAAACAATCACAAAGAAGTGGAGCGGCGACGCCGTG
AGGCGATCAATGAGGGCATCAATCAGATTGCTCGCCTTGTCCCCAACTGT
GACAAGAACAAGGGCGCCATCCTGCAACGCGCAATTGAATATATATGCCA
ACTACACGAAGAAAAGAAAGCCATGAGTGAACGCTGGGATCAGAACAATA
TGACCACAAGCCATGCTATCAACGAAATTAGTTCGCAGAACTCCAAACTG
AAGATTGAGGTCAACCGTCGGGGTGACATTGCGCTGAAGTGGTTGCAGCG
CTGCCGCGACGCAGGTCTTGAGTTCGAAGACTACGAAGACTCGAAGGAGC
TGGAGCCCCTTGACATTGACCAAGGCCAGGTTTAAATGTCCGATCCGTCG
TTGGGTGCTACCGATGGTAGTGTTACAGCCAAGCGAAAGCGCGATAGTAC
CGATAGCACCGGTCCAGATGCCCAGCGTCTGAATCGATCTTCCAATGGGA
GCAACGGCAGCATTCCCGCCCCAGATACTCAGCCGAACTTCGCCCATAGC
TCTCTTGGATCCTATGACGCGCATCTTCCAAGCGCTACGACAGAACTCAA
CATCGACCAGCAAATTCTGCAACATGTTGGTCCTCAAAACGGTATCTCGG
ATGACAATGCCCTCACTGCCAAGGCGGCACTCGCCGCCCACACCCCTCAG
AACAAATACCCGCCTCCCCCGGATGCGACCTTTGACAATAATCTCGCCCA
CGGCTTGACGTTCGGAGACGACATGGGCCAGGCTATCGGCTCCGCACATG
GTCACAATTCTACTGCTGCCGCCGTTTACGCTGCTCGCGAAGCACAGAGC
ATGAACCAGAAGCCTTCCGTAGGTTCTCCGGAATGGCATCAGATCCGTAA
AAACAATCACAAAGAAGTGGAGCGGCGACGCCGTGAGGCGATCAATGAGG
GCATCAATCAGATTGCTCGCCTTGTCCCCAACTGTGACAAGAACAAGGGC
GCCATCCTGCAACGCGCAATTGAATATATATGCCAACTACACGAAGAAAA
GAAAGCCATGAGTGAACGCTGGGATCAGAACAATATGACCACAAGCCATG
CTATCAACGAAATTAGTTCGCAGAACTCCAAACTGAAGATTGAGGTCAAC
CGTCGGGGTGACATTGCGCTGAAGTGGTTGCAGCGCTGCCGCGACGCAGG
TCTTGAGTTCGAAGACTACGAAGACTCGAAGGAGCTGGAGCCCCTTGACA
TTGACCAAGGCCAGGTTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046983 | protein dimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008080-T1.utr3p1 | KJC3_008080-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263P17 |
| DBxref | InterPro:IPR036638 |
| DBxref | InterPro:IPR011598 |
| DBxref | PFAM:PF00010 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:914135..916323 + |
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